Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV1A0A0A0MS02 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TRGV1A0A0A0MS02 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV1A0A0A0MS02 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV1A0A0A0MS02 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRGV1A0A0A0MS02 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.75■□□□□ 0.11
TRGV1A0A0A0MS02 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV1A0A0A0MS02 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV1A0A0A0MS02 AC087742.1-201ENST00000575880 1738 ntBASIC15.74■□□□□ 0.11
TRGV1A0A0A0MS02 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.74■□□□□ 0.11
TRGV1A0A0A0MS02 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV1A0A0A0MS02 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV1A0A0A0MS02 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV1A0A0A0MS02 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV1A0A0A0MS02 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV1A0A0A0MS02 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV1A0A0A0MS02 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.74■□□□□ 0.11
TRGV1A0A0A0MS02 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRGV1A0A0A0MS02 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV1A0A0A0MS02 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC15.74■□□□□ 0.11
TRGV1A0A0A0MS02 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRGV1A0A0A0MS02 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRGV1A0A0A0MS02 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV1A0A0A0MS02 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV1A0A0A0MS02 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV1A0A0A0MS02 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRGV1A0A0A0MS02 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV1A0A0A0MS02 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV1A0A0A0MS02 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV1A0A0A0MS02 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC15.73■□□□□ 0.11
TRGV1A0A0A0MS02 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.73■□□□□ 0.11
TRGV1A0A0A0MS02 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV1A0A0A0MS02 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV1A0A0A0MS02 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC15.73■□□□□ 0.11
TRGV1A0A0A0MS02 AC131281.2-201ENST00000520478 145 ntBASIC15.73■□□□□ 0.11
TRGV1A0A0A0MS02 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC15.73■□□□□ 0.11
TRGV1A0A0A0MS02 MIR4466-201ENST00000606121 54 ntBASIC15.73■□□□□ 0.11
TRGV1A0A0A0MS02 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRGV1A0A0A0MS02 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.73■□□□□ 0.11
TRGV1A0A0A0MS02 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.73■□□□□ 0.11
TRGV1A0A0A0MS02 SYT6-210ENST00000641643 1587 ntBASIC15.73■□□□□ 0.11
TRGV1A0A0A0MS02 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRGV1A0A0A0MS02 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV1A0A0A0MS02 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV1A0A0A0MS02 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV1A0A0A0MS02 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV1A0A0A0MS02 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 ECEL1P1-201ENST00000373592 1742 ntBASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 MIR3181-201ENST00000578512 73 ntBASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV1A0A0A0MS02 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 LINC00526-201ENST00000581067 1875 ntBASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 AL136116.3-201ENST00000402907 1138 ntBASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 PTCHD3P2-201ENST00000424937 1205 ntBASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 DUX4L19-201ENST00000557448 1267 ntBASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV1A0A0A0MS02 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
TRGV1A0A0A0MS02 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.7■□□□□ 0.1
TRGV1A0A0A0MS02 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms