RNA–Protein interactions for RNA: ENST00000376901.8

YIF1A-203, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIF1A, Length 1,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-203ENST00000376901 NISCHQ9Y2I1 1504 aa58.4■■■■■ 6.94
YIF1A-203ENST00000376901 CCDC180Q9P1Z9 1646 aa52.62■■■■■ 6.01
YIF1A-203ENST00000376901 ABCC9O60706 1549 aa52.5■■■■■ 5.99
YIF1A-203ENST00000376901 RB1CC1Q8TDY2 1594 aa50.04■■■■■ 5.6
YIF1A-203ENST00000376901 NACADO15069 1562 aa49.67■■■■■ 5.54
YIF1A-203ENST00000376901 DNAJC5BQ9UF47 199 aa49.31■■■■■ 5.48
YIF1A-203ENST00000376901 UNC13AQ9UPW8 1703 aa49.04■■■■■ 5.44
YIF1A-203ENST00000376901 MYO15BQ96JP2 1530 aa49.01■■■■■ 5.44
YIF1A-203ENST00000376901 DCAF8L2P0C7V8 631 aa48.99■■■■■ 5.43
YIF1A-203ENST00000376901 PABPN1Q86U42 306 aaKnown RBP eCLIP48.73■■■■■ 5.39
YIF1A-203ENST00000376901 BICRAQ9NZM4 1560 aa48.63■■■■■ 5.38
YIF1A-203ENST00000376901 ZCCHC6Q5VYS8 1495 aaKnown RBP48.42■■■■■ 5.34
YIF1A-203ENST00000376901 DCAF1Q9Y4B6 1507 aa48.32■■■■■ 5.33
YIF1A-203ENST00000376901 SHROOM4Q9ULL8 1493 aa48.01■■■■■ 5.28
YIF1A-203ENST00000376901 SCRIBQ14160 1630 aa47.78■■■■■ 5.24
YIF1A-203ENST00000376901 CC2D2AQ9P2K1 1620 aa47.52■■■■■ 5.2
YIF1A-203ENST00000376901 EIF4G1Q04637 1599 aaKnown RBP47.41■■■■■ 5.18
YIF1A-203ENST00000376901 CECR2Q9BXF3 1484 aa47.33■■■■■ 5.17
YIF1A-203ENST00000376901 NCAPD3P42695 1498 aa45.81■■■■■ 4.92
YIF1A-203ENST00000376901 SMARCA4P51532 1647 aa45.64■■■■■ 4.9
YIF1A-203ENST00000376901 ATAD2BQ9ULI0 1458 aa45.64■■■■■ 4.9
YIF1A-203ENST00000376901 SMARCA2P51531 1590 aa45.55■■■■■ 4.88
YIF1A-203ENST00000376901 HMGXB3Q12766 1538 aa45.55■■■■■ 4.88
YIF1A-203ENST00000376901 CUX2O14529 1486 aa45.4■■■■■ 4.86
YIF1A-203ENST00000376901 DNAJC5Q9H3Z4 198 aa45.39■■■■■ 4.86
YIF1A-203ENST00000376901 BAZ1AQ9NRL2 1556 aaPredicted RBP45.36■■■■■ 4.85
YIF1A-203ENST00000376901 ERCC6Q03468 1493 aa45.31■■■■■ 4.84
YIF1A-203ENST00000376901 PEG3Q9GZU2 1588 aa45.25■■■■■ 4.83
YIF1A-203ENST00000376901 BAZ1BQ9UIG0 1483 aaKnown RBP45.17■■■■■ 4.82
YIF1A-203ENST00000376901 NESP48681 1621 aa45.09■■■■■ 4.81
YIF1A-203ENST00000376901 MROH2BQ7Z745 1585 aa44.98■■■■■ 4.79
YIF1A-203ENST00000376901 LAMC3Q9Y6N6 1575 aa44.86■■■■■ 4.77
YIF1A-203ENST00000376901 THOC2Q8NI27 1593 aaKnown RBP44.82■■■■■ 4.76
YIF1A-203ENST00000376901 KIF21AQ7Z4S6 1674 aa44.64■■■■■ 4.74
YIF1A-203ENST00000376901 PDS5BQ9NTI5 1447 aa44.49■■■■■ 4.71
YIF1A-203ENST00000376901 WIZO95785 1651 aa44.46■■■■■ 4.71
YIF1A-203ENST00000376901 CADPSQ9ULU8 1353 aa44.35■■■■■ 4.69
YIF1A-203ENST00000376901 MRC2Q9UBG0 1479 aa44.17■■■■■ 4.66
YIF1A-203ENST00000376901 WDR62O43379 1518 aa44.14■■■■■ 4.66
YIF1A-203ENST00000376901 RSF1Q96T23 1441 aaPredicted RBP43.96■■■■■ 4.63
YIF1A-203ENST00000376901 CEP164Q9UPV0 1460 aa43.96■■■■■ 4.63
YIF1A-203ENST00000376901 TOP2AP11388 1531 aaKnown RBP43.91■■■■■ 4.62
YIF1A-203ENST00000376901 CFTRP13569 1480 aa43.89■■■■■ 4.62
YIF1A-203ENST00000376901 FANCD2Q9BXW9 1451 aa43.88■■■■■ 4.61
YIF1A-203ENST00000376901 PRDM2Q13029 1718 aa43.63■■■■■ 4.58
YIF1A-203ENST00000376901 URB2Q14146 1524 aaKnown RBP43.56■■■■■ 4.56
YIF1A-203ENST00000376901 CCDC88BA6NC98 1476 aa43.33■■■■■ 4.53
YIF1A-203ENST00000376901 TRIM41Q8WV44 630 aa43.22■■■■■ 4.51
YIF1A-203ENST00000376901 OSCARQ8IYS5 282 aa43.12■■■■■ 4.49
YIF1A-203ENST00000376901 IFT140Q96RY7 1462 aa43.08■■■■■ 4.49
YIF1A-203ENST00000376901 TOPBP1Q92547 1522 aa43.07■■■■■ 4.48
YIF1A-203ENST00000376901 ZNF608Q9ULD9 1512 aaPredicted RBP43.01■■■■■ 4.48
YIF1A-203ENST00000376901 ABCC8Q09428 1581 aa42.95■■■■■ 4.47
YIF1A-203ENST00000376901 DNMBPQ6XZF7 1577 aa42.94■■■■■ 4.46
YIF1A-203ENST00000376901 EIF4G3O43432 1585 aaKnown RBP42.86■■■■■ 4.45
YIF1A-203ENST00000376901 RIMBP3CA6NJZ7 1639 aa42.77■■■■■ 4.44
YIF1A-203ENST00000376901 RIMBP3BA6NNM3 1639 aa42.77■■■■■ 4.44
YIF1A-203ENST00000376901 TARBP1Q13395 1621 aaKnown RBP42.77■■■■■ 4.44
YIF1A-203ENST00000376901 RIMBP3Q9UFD9 1639 aa42.77■■■■■ 4.44
YIF1A-203ENST00000376901 POLA1P09884 1462 aaPredicted RBP42.61■■■■■ 4.41
YIF1A-203ENST00000376901 ARHGEF11O15085 1522 aa42.6■■■■■ 4.41
YIF1A-203ENST00000376901 CHD1O14646 1710 aa42.6■■■■■ 4.41
YIF1A-203ENST00000376901 AQRO60306 1485 aaKnown RBP eCLIP42.55■■■■■ 4.42e-8■■■■■ 27.5
YIF1A-203ENST00000376901 RAD54L2Q9Y4B4 1467 aa42.39■■■■■ 4.38
YIF1A-203ENST00000376901 WDR97A6NE52 1622 aa42.37■■■■■ 4.37
YIF1A-203ENST00000376901 SOGA1O94964 1423 aa42.32■■■■■ 4.37
YIF1A-203ENST00000376901 FGD5Q6ZNL6 1462 aa42.31■■■■■ 4.36
YIF1A-203ENST00000376901 CUX1P39880 1505 aa42.28■■■■■ 4.36
YIF1A-203ENST00000376901 TDRD9Q8NDG6 1382 aaKnown RBP42.23■■■■■ 4.35
YIF1A-203ENST00000376901 SNAPC4Q5SXM2 1469 aa42.17■■■■■ 4.34
YIF1A-203ENST00000376901 ARAP1Q96P48 1450 aa42.17■■■■■ 4.34
YIF1A-203ENST00000376901 FBLN2P98095 1184 aa42.13■■■■■ 4.33
YIF1A-203ENST00000376901 MAGI1Q96QZ7 1491 aaPredicted RBP42.1■■■■■ 4.33
YIF1A-203ENST00000376901 CLASP1Q7Z460 1538 aa42.1■■■■■ 4.33
YIF1A-203ENST00000376901 CYB5RLQ6IPT4 315 aa42.07■■■■■ 4.33
YIF1A-203ENST00000376901 GRIN2BQ13224 1484 aa42.04■■■■■ 4.32
YIF1A-203ENST00000376901 SYNJ1O43426 1573 aa42■■■■■ 4.31
YIF1A-203ENST00000376901 PBRM1Q86U86 1689 aa42■■■■■ 4.31
YIF1A-203ENST00000376901 SYNJ2O15056 1496 aa41.93■■■■■ 4.3
YIF1A-203ENST00000376901 ABCA5Q8WWZ7 1642 aa41.89■■■■■ 4.3
YIF1A-203ENST00000376901 ABCA10Q8WWZ4 1543 aa41.86■■■■■ 4.29
YIF1A-203ENST00000376901 CHMP7Q8WUX9 453 aaPredicted RBP41.86■■■■■ 4.29
YIF1A-203ENST00000376901 GAPVD1Q14C86 1478 aa41.85■■■■■ 4.29
YIF1A-203ENST00000376901 SUPT5HO00267 1087 aaKnown RBP41.68■■■■■ 4.26
YIF1A-203ENST00000376901 BIVM-ERCC5R4GMW8 1640 aa41.66■■■■■ 4.26
YIF1A-203ENST00000376901 TOP2BQ02880 1626 aa41.61■■■■■ 4.25
YIF1A-203ENST00000376901 TRHP20396 242 aaPredicted RBP41.6■■■■■ 4.25
YIF1A-203ENST00000376901 WRNQ14191 1432 aaPredicted RBP eCLIP41.58■■■■■ 4.25
YIF1A-203ENST00000376901 ADAMTS12P58397 1594 aa41.56■■■■■ 4.24
YIF1A-203ENST00000376901 GRIN2AQ12879 1464 aa41.53■■■■■ 4.24
YIF1A-203ENST00000376901 CEP170Q5SW79 1584 aa41.42■■■■■ 4.22
YIF1A-203ENST00000376901 NUP160Q12769 1436 aa41.41■■■■■ 4.22
YIF1A-203ENST00000376901 ERCC6L2Q5T890 1561 aa41.37■■■■■ 4.21
YIF1A-203ENST00000376901 ERICH3Q5RHP9 1530 aa41.35■■■■■ 4.21
YIF1A-203ENST00000376901 SHROOM2Q13796 1616 aa41.33■■■■■ 4.21
YIF1A-203ENST00000376901 FHAD1B1AJZ9 1412 aa41.33■■■■■ 4.21
YIF1A-203ENST00000376901 RUSC2Q8N2Y8 1516 aa40.99■■■■■ 4.15
YIF1A-203ENST00000376901 PRG4Q92954 1404 aaPredicted RBP40.93■■■■■ 4.14
YIF1A-203ENST00000376901 KIF13AQ9H1H9 1805 aa40.85■■■■■ 4.13
YIF1A-203ENST00000376901 JPH4Q96JJ6 628 aa40.81■■■■■ 4.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms