RNA–Protein interactions for RNA: ENST00000371021.4

FRAT1-201, Transcript of FRAT1, WNT signaling pathway regulator, humanhuman

APPRIS P1 BASIC

Gene FRAT1, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAT1-201ENST00000371021 NISCHQ9Y2I1 1504 aa45.61■■■■■ 4.89
FRAT1-201ENST00000371021 SHROOM4Q9ULL8 1493 aa38.97■■■■□ 3.83
FRAT1-201ENST00000371021 CCDC180Q9P1Z9 1646 aa38.7■■■■□ 3.79
FRAT1-201ENST00000371021 ZCCHC6Q5VYS8 1495 aaKnown RBP38.51■■■■□ 3.76
FRAT1-201ENST00000371021 SUPT5HO00267 1087 aaKnown RBP38.16■■■■□ 3.7
FRAT1-201ENST00000371021 DCAF8L2P0C7V8 631 aa38.16■■■■□ 3.7
FRAT1-201ENST00000371021 DCAF1Q9Y4B6 1507 aa37.32■■■■□ 3.56
FRAT1-201ENST00000371021 CHIC1Q5VXU3 224 aa36.94■■■■□ 3.5
FRAT1-201ENST00000371021 MYO15BQ96JP2 1530 aa36.7■■■■□ 3.47
FRAT1-201ENST00000371021 SCRIBQ14160 1630 aa36.43■■■■□ 3.42
FRAT1-201ENST00000371021 ABCC9O60706 1549 aa36.27■■■■□ 3.4
FRAT1-201ENST00000371021 RSF1Q96T23 1441 aaPredicted RBP36.09■■■■□ 3.37
FRAT1-201ENST00000371021 LOC105371045A0A1W2PR82 267 aa35.93■■■■□ 3.34
FRAT1-201ENST00000371021 NACADO15069 1562 aa35.9■■■■□ 3.34
FRAT1-201ENST00000371021 CECR2Q9BXF3 1484 aa35.7■■■■□ 3.3
FRAT1-201ENST00000371021 PCGF6Q9BYE7 350 aa35.66■■■■□ 3.3
FRAT1-201ENST00000371021 RB1CC1Q8TDY2 1594 aa35.63■■■■□ 3.29
FRAT1-201ENST00000371021 MROH2BQ7Z745 1585 aa35.5■■■■□ 3.27
FRAT1-201ENST00000371021 TRIM41Q8WV44 630 aa35.49■■■■□ 3.27
FRAT1-201ENST00000371021 HRCP23327 699 aa35.43■■■■□ 3.26
FRAT1-201ENST00000371021 FAM9AQ8IZU1 332 aaPredicted RBP35.3■■■■□ 3.24
FRAT1-201ENST00000371021 WIZO95785 1651 aa35.27■■■■□ 3.24
FRAT1-201ENST00000371021 EHMT2Q96KQ7 1210 aa35.08■■■■□ 3.21
FRAT1-201ENST00000371021 BAZ1AQ9NRL2 1556 aaPredicted RBP35■■■■□ 3.19
FRAT1-201ENST00000371021 TRIM26Q12899 539 aaPredicted RBP34.93■■■■□ 3.18
FRAT1-201ENST00000371021 PPARGC1BQ86YN6 1023 aaKnown RBP34.87■■■■□ 3.17
FRAT1-201ENST00000371021 UNC13AQ9UPW8 1703 aa34.79■■■■□ 3.16
FRAT1-201ENST00000371021 PABPN1Q86U42 306 aaKnown RBP eCLIP34.77■■■■□ 3.16
FRAT1-201ENST00000371021 SMARCA4P51532 1647 aa34.73■■■■□ 3.15
FRAT1-201ENST00000371021 TOP2AP11388 1531 aaKnown RBP34.66■■■■□ 3.14
FRAT1-201ENST00000371021 EIF4G1Q04637 1599 aaKnown RBP34.62■■■■□ 3.13
FRAT1-201ENST00000371021 CCDC88BA6NC98 1476 aa34.61■■■■□ 3.13
FRAT1-201ENST00000371021 SMARCA2P51531 1590 aa34.49■■■■□ 3.11
FRAT1-201ENST00000371021 ABCC8Q09428 1581 aa34.47■■■■□ 3.11
FRAT1-201ENST00000371021 BICRAQ9NZM4 1560 aa34.46■■■■□ 3.11
FRAT1-201ENST00000371021 SOGA1O94964 1423 aa34.16■■■■□ 3.06
FRAT1-201ENST00000371021 PEG3Q9GZU2 1588 aa34.02■■■■□ 3.04
FRAT1-201ENST00000371021 RUSC2Q8N2Y8 1516 aa34.01■■■■□ 3.04
FRAT1-201ENST00000371021 ZEB1P37275 1124 aaPredicted RBP34■■■■□ 3.03
FRAT1-201ENST00000371021 CSRNP3Q8WYN3 585 aa33.96■■■■□ 3.03
FRAT1-201ENST00000371021 ATAD2BQ9ULI0 1458 aa33.96■■■■□ 3.03
FRAT1-201ENST00000371021 WRNQ14191 1432 aaPredicted RBP eCLIP33.89■■■■□ 3.02
FRAT1-201ENST00000371021 UBTFP17480 764 aaKnown RBP33.86■■■■□ 3.01
FRAT1-201ENST00000371021 TTBK1Q5TCY1 1321 aaPredicted RBP33.86■■■■□ 3.01
FRAT1-201ENST00000371021 CEP162Q5TB80 1403 aa33.86■■■■□ 3.01
FRAT1-201ENST00000371021 BAZ1BQ9UIG0 1483 aaKnown RBP33.84■■■■□ 3.01
FRAT1-201ENST00000371021 TNIKQ9UKE5 1360 aa33.8■■■■□ 3
FRAT1-201ENST00000371021 EEA1Q15075 1411 aa33.79■■■■□ 3
FRAT1-201ENST00000371021 SYNJ1O43426 1573 aa33.7■■■□□ 2.99
FRAT1-201ENST00000371021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.68■■■□□ 2.98
FRAT1-201ENST00000371021 GOLGA3Q08378 1498 aa33.61■■■□□ 2.97
FRAT1-201ENST00000371021 CCER1Q8TC90 406 aaPredicted RBP33.53■■■□□ 2.96
FRAT1-201ENST00000371021 CEP164Q9UPV0 1460 aa33.43■■■□□ 2.94
FRAT1-201ENST00000371021 RANGAP1P46060 587 aaPredicted RBP33.35■■■□□ 2.93
FRAT1-201ENST00000371021 KIF21BO75037 1637 aa33.32■■■□□ 2.92
FRAT1-201ENST00000371021 NCAPD3P42695 1498 aa33.3■■■□□ 2.92
FRAT1-201ENST00000371021 RAPGEF2Q9Y4G8 1499 aa33.3■■■□□ 2.92
FRAT1-201ENST00000371021 CLIP1P30622 1438 aa33.28■■■□□ 2.92
FRAT1-201ENST00000371021 TOP2BQ02880 1626 aa33.25■■■□□ 2.91
FRAT1-201ENST00000371021 HMGXB3Q12766 1538 aa33.19■■■□□ 2.9
FRAT1-201ENST00000371021 BIVM-ERCC5R4GMW8 1640 aa33.08■■■□□ 2.89
FRAT1-201ENST00000371021 VPS8Q8N3P4 1428 aa33.07■■■□□ 2.88
FRAT1-201ENST00000371021 CUX1P39880 1505 aa33.04■■■□□ 2.88
FRAT1-201ENST00000371021 HNRNPUL2Q1KMD3 747 aaKnown RBP33.03■■■□□ 2.88
FRAT1-201ENST00000371021 APLP2Q06481 763 aa33.01■■■□□ 2.87
FRAT1-201ENST00000371021 CFTRP13569 1480 aa32.99■■■□□ 2.87
FRAT1-201ENST00000371021 PRXQ9BXM0 1461 aa32.94■■■□□ 2.86
FRAT1-201ENST00000371021 KIF27Q86VH2 1401 aa32.85■■■□□ 2.85
FRAT1-201ENST00000371021 ERICH3Q5RHP9 1530 aa32.82■■■□□ 2.85
FRAT1-201ENST00000371021 DIEXFQ68CQ4 756 aaKnown RBP32.74■■■□□ 2.83
FRAT1-201ENST00000371021 ARAP1Q96P48 1450 aa32.74■■■□□ 2.83
FRAT1-201ENST00000371021 CADPSQ9ULU8 1353 aa32.71■■■□□ 2.83
FRAT1-201ENST00000371021 KANK4Q5T7N3 995 aaPredicted RBP32.68■■■□□ 2.82
FRAT1-201ENST00000371021 CUX2O14529 1486 aa32.61■■■□□ 2.81
FRAT1-201ENST00000371021 IGF1RP08069 1367 aa32.58■■■□□ 2.81
FRAT1-201ENST00000371021 SCAF1Q9H7N4 1312 aaKnown RBP32.56■■■□□ 2.8
FRAT1-201ENST00000371021 CC2D2AQ9P2K1 1620 aa32.56■■■□□ 2.8
FRAT1-201ENST00000371021 ZNF316A6NFI3 1004 aaPredicted RBP32.54■■■□□ 2.8
FRAT1-201ENST00000371021 ARHGAP35Q9NRY4 1499 aa32.5■■■□□ 2.79
FRAT1-201ENST00000371021 PRDM2Q13029 1718 aa32.49■■■□□ 2.79
FRAT1-201ENST00000371021 FGD5Q6ZNL6 1462 aa32.49■■■□□ 2.79
FRAT1-201ENST00000371021 CARMIL1Q5VZK9 1371 aa32.42■■■□□ 2.78
FRAT1-201ENST00000371021 FANCD2Q9BXW9 1451 aa32.38■■■□□ 2.77
FRAT1-201ENST00000371021 NEUROD1Q13562 356 aa32.34■■■□□ 2.77
FRAT1-201ENST00000371021 ACIN1Q9UKV3 1341 aaKnown RBP32.3■■■□□ 2.76
FRAT1-201ENST00000371021 NESP48681 1621 aa32.28■■■□□ 2.76
FRAT1-201ENST00000371021 ITGAEP38570 1179 aa32.27■■■□□ 2.76
FRAT1-201ENST00000371021 RAD54L2Q9Y4B4 1467 aa32.26■■■□□ 2.75
FRAT1-201ENST00000371021 PELP1Q8IZL8 1130 aaKnown RBP32.26■■■□□ 2.75
FRAT1-201ENST00000371021 P3H3Q8IVL6 736 aa32.25■■■□□ 2.75
FRAT1-201ENST00000371021 RRBP1Q9P2E9 1410 aaKnown RBP32.25■■■□□ 2.75
FRAT1-201ENST00000371021 DHX57Q6P158 1386 aaKnown RBP32.24■■■□□ 2.75
FRAT1-201ENST00000371021 CCNB3Q8WWL7 1395 aa32.19■■■□□ 2.74
FRAT1-201ENST00000371021 TOPBP1Q92547 1522 aa32.13■■■□□ 2.73
FRAT1-201ENST00000371021 POLA1P09884 1462 aaPredicted RBP32.12■■■□□ 2.73
FRAT1-201ENST00000371021 ATP1B4Q9UN42 357 aaPredicted RBP32.12■■■□□ 2.73
FRAT1-201ENST00000371021 DNMBPQ6XZF7 1577 aa32.11■■■□□ 2.73
FRAT1-201ENST00000371021 CENPBP07199 599 aaPredicted RBP32.11■■■□□ 2.73
FRAT1-201ENST00000371021 MIER1Q8N108 512 aa32.11■■■□□ 2.73
FRAT1-201ENST00000371021 CLSPNQ9HAW4 1339 aa32.07■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms