RNA–Protein interactions for RNA: ENST00000424893.5

MYD88-205, Transcript of MYD88, innate immune signal transduction adaptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MYD88, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYD88-205ENST00000424893 NISCHQ9Y2I1 1504 aa52.51■■■■■ 6
MYD88-205ENST00000424893 CCDC180Q9P1Z9 1646 aa46.43■■■■■ 5.02
MYD88-205ENST00000424893 ABCC9O60706 1549 aa45.01■■■■■ 4.8
MYD88-205ENST00000424893 ZCCHC6Q5VYS8 1495 aaKnown RBP43.83■■■■■ 4.61
MYD88-205ENST00000424893 DCAF8L2P0C7V8 631 aa43.82■■■■■ 4.61
MYD88-205ENST00000424893 NACADO15069 1562 aa43.58■■■■■ 4.57
MYD88-205ENST00000424893 RB1CC1Q8TDY2 1594 aa43.5■■■■■ 4.55
MYD88-205ENST00000424893 MYO15BQ96JP2 1530 aa43.46■■■■■ 4.55
MYD88-205ENST00000424893 DCAF1Q9Y4B6 1507 aa43.46■■■■■ 4.55
MYD88-205ENST00000424893 SCRIBQ14160 1630 aa42.44■■■■■ 4.38
MYD88-205ENST00000424893 UNC13AQ9UPW8 1703 aa42.43■■■■■ 4.38
MYD88-205ENST00000424893 PABPN1Q86U42 306 aaKnown RBP eCLIP42.19■■■■■ 4.34
MYD88-205ENST00000424893 BICRAQ9NZM4 1560 aa42.11■■■■■ 4.33
MYD88-205ENST00000424893 SHROOM4Q9ULL8 1493 aa41.86■■■■■ 4.29
MYD88-205ENST00000424893 EIF4G1Q04637 1599 aaKnown RBP40.99■■■■■ 4.15
MYD88-205ENST00000424893 CECR2Q9BXF3 1484 aa40.85■■■■■ 4.13
MYD88-205ENST00000424893 DNAJC5BQ9UF47 199 aa40.84■■■■■ 4.13
MYD88-205ENST00000424893 CC2D2AQ9P2K1 1620 aa40.7■■■■■ 4.11
MYD88-205ENST00000424893 BAZ1AQ9NRL2 1556 aaPredicted RBP40.68■■■■■ 4.1
MYD88-205ENST00000424893 SMARCA4P51532 1647 aa40.63■■■■■ 4.09
MYD88-205ENST00000424893 MROH2BQ7Z745 1585 aa40.48■■■■■ 4.07
MYD88-205ENST00000424893 ATAD2BQ9ULI0 1458 aa40.3■■■■■ 4.04
MYD88-205ENST00000424893 SMARCA2P51531 1590 aa40.29■■■■■ 4.04
MYD88-205ENST00000424893 RSF1Q96T23 1441 aaPredicted RBP40.22■■■■■ 4.03
MYD88-205ENST00000424893 NCAPD3P42695 1498 aa40.21■■■■■ 4.03
MYD88-205ENST00000424893 PEG3Q9GZU2 1588 aa40.2■■■■■ 4.03
MYD88-205ENST00000424893 WIZO95785 1651 aa40.05■■■■■ 4
MYD88-205ENST00000424893 HMGXB3Q12766 1538 aa40.04■■■■■ 4
MYD88-205ENST00000424893 BAZ1BQ9UIG0 1483 aaKnown RBP40.03■■■■■ 4
MYD88-205ENST00000424893 SUPT5HO00267 1087 aaKnown RBP39.68■■■■□ 3.94
MYD88-205ENST00000424893 TOP2AP11388 1531 aaKnown RBP39.67■■■■□ 3.94
MYD88-205ENST00000424893 CCDC88BA6NC98 1476 aa39.23■■■■□ 3.87
MYD88-205ENST00000424893 CADPSQ9ULU8 1353 aa39.09■■■■□ 3.85
MYD88-205ENST00000424893 NESP48681 1621 aa39.07■■■■□ 3.85
MYD88-205ENST00000424893 LAMC3Q9Y6N6 1575 aa39.06■■■■□ 3.84
MYD88-205ENST00000424893 CFTRP13569 1480 aa38.93■■■■□ 3.82
MYD88-205ENST00000424893 PDS5BQ9NTI5 1447 aa38.83■■■■□ 3.81
MYD88-205ENST00000424893 ERCC6Q03468 1493 aa38.79■■■■□ 3.8
MYD88-205ENST00000424893 FANCD2Q9BXW9 1451 aa38.63■■■■□ 3.77
MYD88-205ENST00000424893 PRDM2Q13029 1718 aa38.61■■■■□ 3.77
MYD88-205ENST00000424893 KIF21AQ7Z4S6 1674 aa38.58■■■■□ 3.77
MYD88-205ENST00000424893 CEP164Q9UPV0 1460 aa38.54■■■■□ 3.76
MYD88-205ENST00000424893 MRC2Q9UBG0 1479 aa38.37■■■■□ 3.73
MYD88-205ENST00000424893 THOC2Q8NI27 1593 aaKnown RBP38.33■■■■□ 3.73
MYD88-205ENST00000424893 WDR62O43379 1518 aa38.19■■■■□ 3.7
MYD88-205ENST00000424893 URB2Q14146 1524 aaKnown RBP38.18■■■■□ 3.7
MYD88-205ENST00000424893 CUX2O14529 1486 aa38.15■■■■□ 3.7
MYD88-205ENST00000424893 ABCC8Q09428 1581 aa38.12■■■■□ 3.69
MYD88-205ENST00000424893 TOPBP1Q92547 1522 aa38.06■■■■□ 3.68
MYD88-205ENST00000424893 DNMBPQ6XZF7 1577 aa38.05■■■■□ 3.68
MYD88-205ENST00000424893 CUX1P39880 1505 aa37.94■■■■□ 3.66
MYD88-205ENST00000424893 WRNQ14191 1432 aaPredicted RBP eCLIP37.94■■■■□ 3.66
MYD88-205ENST00000424893 POLA1P09884 1462 aaPredicted RBP37.77■■■■□ 3.64
MYD88-205ENST00000424893 FGD5Q6ZNL6 1462 aa37.76■■■■□ 3.63
MYD88-205ENST00000424893 SYNJ1O43426 1573 aa37.75■■■■□ 3.63
MYD88-205ENST00000424893 TOP2BQ02880 1626 aa37.75■■■■□ 3.63
MYD88-205ENST00000424893 BIVM-ERCC5R4GMW8 1640 aa37.72■■■■□ 3.63
MYD88-205ENST00000424893 IFT140Q96RY7 1462 aa37.71■■■■□ 3.63
MYD88-205ENST00000424893 SOGA1O94964 1423 aa37.67■■■■□ 3.62
MYD88-205ENST00000424893 RAD54L2Q9Y4B4 1467 aa37.6■■■■□ 3.61
MYD88-205ENST00000424893 TARBP1Q13395 1621 aaKnown RBP37.56■■■■□ 3.6
MYD88-205ENST00000424893 TRIM41Q8WV44 630 aa37.47■■■■□ 3.59
MYD88-205ENST00000424893 ZNF608Q9ULD9 1512 aaPredicted RBP37.46■■■■□ 3.59
MYD88-205ENST00000424893 ABCA10Q8WWZ4 1543 aa37.41■■■■□ 3.58
MYD88-205ENST00000424893 TDRD9Q8NDG6 1382 aaKnown RBP37.39■■■■□ 3.58
MYD88-205ENST00000424893 AQRO60306 1485 aaKnown RBP eCLIP37.36■■■■□ 3.571e-6■■■■■ 35.7
MYD88-205ENST00000424893 WDR97A6NE52 1622 aa37.34■■■■□ 3.57
MYD88-205ENST00000424893 EIF4G3O43432 1585 aaKnown RBP37.33■■■■□ 3.57
MYD88-205ENST00000424893 CHIC1Q5VXU3 224 aa37.29■■■■□ 3.56
MYD88-205ENST00000424893 GAPVD1Q14C86 1478 aa37.22■■■■□ 3.55
MYD88-205ENST00000424893 ABCA5Q8WWZ7 1642 aa37.18■■■■□ 3.54
MYD88-205ENST00000424893 GRIN2BQ13224 1484 aa37.14■■■■□ 3.54
MYD88-205ENST00000424893 KIF27Q86VH2 1401 aa37.13■■■■□ 3.53
MYD88-205ENST00000424893 PBRM1Q86U86 1689 aa37.04■■■■□ 3.52
MYD88-205ENST00000424893 SNAPC4Q5SXM2 1469 aa37.01■■■■□ 3.52
MYD88-205ENST00000424893 MAGI1Q96QZ7 1491 aaPredicted RBP36.99■■■■□ 3.51
MYD88-205ENST00000424893 ERICH3Q5RHP9 1530 aa36.97■■■■□ 3.51
MYD88-205ENST00000424893 FBLN2P98095 1184 aa36.9■■■■□ 3.5
MYD88-205ENST00000424893 IGF1RP08069 1367 aa36.89■■■■□ 3.5
MYD88-205ENST00000424893 RUSC2Q8N2Y8 1516 aa36.88■■■■□ 3.49
MYD88-205ENST00000424893 CHMP7Q8WUX9 453 aaPredicted RBP36.86■■■■□ 3.49
MYD88-205ENST00000424893 SYNJ2O15056 1496 aa36.83■■■■□ 3.49
MYD88-205ENST00000424893 FHAD1B1AJZ9 1412 aa36.82■■■■□ 3.48
MYD88-205ENST00000424893 ADAMTS12P58397 1594 aa36.8■■■■□ 3.48
MYD88-205ENST00000424893 OSCARQ8IYS5 282 aa36.75■■■■□ 3.47
MYD88-205ENST00000424893 EEA1Q15075 1411 aa36.75■■■■□ 3.47
MYD88-205ENST00000424893 CHD1O14646 1710 aa36.74■■■■□ 3.47
MYD88-205ENST00000424893 CUL7Q14999 1698 aa36.72■■■■□ 3.47
MYD88-205ENST00000424893 CARMIL1Q5VZK9 1371 aa36.71■■■■□ 3.47
MYD88-205ENST00000424893 FAM9AQ8IZU1 332 aaPredicted RBP36.67■■■■□ 3.46
MYD88-205ENST00000424893 CSRNP3Q8WYN3 585 aa36.66■■■■□ 3.46
MYD88-205ENST00000424893 GRIN2AQ12879 1464 aa36.66■■■■□ 3.46
MYD88-205ENST00000424893 RAPGEF2Q9Y4G8 1499 aa36.53■■■■□ 3.44
MYD88-205ENST00000424893 PRXQ9BXM0 1461 aa36.5■■■■□ 3.43
MYD88-205ENST00000424893 NUP160Q12769 1436 aa36.46■■■■□ 3.43
MYD88-205ENST00000424893 DNAJC5Q9H3Z4 198 aa36.43■■■■□ 3.42
MYD88-205ENST00000424893 CEP170Q5SW79 1584 aa36.41■■■■□ 3.42
MYD88-205ENST00000424893 CLASP1Q7Z460 1538 aa36.36■■■■□ 3.41
MYD88-205ENST00000424893 KIF21BO75037 1637 aa36.26■■■■□ 3.4
MYD88-205ENST00000424893 KIAA0586Q9BVV6 1533 aa36.26■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms