RNA–Protein interactions for RNA: ENST00000239165.8

HOXB7-201, Transcript of homeobox B7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB7, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB7-201ENST00000239165 NISCHQ9Y2I1 1504 aa53.14■■■■■ 6.1
HOXB7-201ENST00000239165 CCDC180Q9P1Z9 1646 aa47.49■■■■■ 5.19
HOXB7-201ENST00000239165 ABCC9O60706 1549 aa46.99■■■■■ 5.11
HOXB7-201ENST00000239165 RB1CC1Q8TDY2 1594 aa44.96■■■■■ 4.79
HOXB7-201ENST00000239165 NACADO15069 1562 aa44.78■■■■■ 4.76
HOXB7-201ENST00000239165 DCAF8L2P0C7V8 631 aa44.57■■■■■ 4.73
HOXB7-201ENST00000239165 MYO15BQ96JP2 1530 aa44.35■■■■■ 4.69
HOXB7-201ENST00000239165 ZCCHC6Q5VYS8 1495 aaKnown RBP44.33■■■■■ 4.69
HOXB7-201ENST00000239165 UNC13AQ9UPW8 1703 aa44.01■■■■■ 4.64
HOXB7-201ENST00000239165 DCAF1Q9Y4B6 1507 aa43.99■■■■■ 4.63
HOXB7-201ENST00000239165 PABPN1Q86U42 306 aaKnown RBP eCLIP43.82■■■■■ 4.61
HOXB7-201ENST00000239165 DNAJC5BQ9UF47 199 aa43.72■■■■■ 4.59
HOXB7-201ENST00000239165 BICRAQ9NZM4 1560 aa43.67■■■■■ 4.58
HOXB7-201ENST00000239165 SCRIBQ14160 1630 aa43.26■■■■■ 4.52
HOXB7-201ENST00000239165 SHROOM4Q9ULL8 1493 aa43.11■■■■■ 4.49
HOXB7-201ENST00000239165 EIF4G1Q04637 1599 aaKnown RBP42.53■■■■■ 4.4
HOXB7-201ENST00000239165 CC2D2AQ9P2K1 1620 aa42.51■■■■■ 4.4
HOXB7-201ENST00000239165 CECR2Q9BXF3 1484 aa42.29■■■■■ 4.36
HOXB7-201ENST00000239165 SMARCA4P51532 1647 aa41.35■■■■■ 4.21
HOXB7-201ENST00000239165 NCAPD3P42695 1498 aa41.34■■■■■ 4.21
HOXB7-201ENST00000239165 ATAD2BQ9ULI0 1458 aa41.27■■■■■ 4.2
HOXB7-201ENST00000239165 BAZ1AQ9NRL2 1556 aaPredicted RBP41.2■■■■■ 4.19
HOXB7-201ENST00000239165 SMARCA2P51531 1590 aa41.18■■■■■ 4.18
HOXB7-201ENST00000239165 HMGXB3Q12766 1538 aa41.07■■■■■ 4.16
HOXB7-201ENST00000239165 PEG3Q9GZU2 1588 aa40.97■■■■■ 4.15
HOXB7-201ENST00000239165 MROH2BQ7Z745 1585 aa40.95■■■■■ 4.15
HOXB7-201ENST00000239165 BAZ1BQ9UIG0 1483 aaKnown RBP40.87■■■■■ 4.13
HOXB7-201ENST00000239165 RSF1Q96T23 1441 aaPredicted RBP40.62■■■■■ 4.09
HOXB7-201ENST00000239165 ERCC6Q03468 1493 aa40.52■■■■■ 4.08
HOXB7-201ENST00000239165 NESP48681 1621 aa40.52■■■■■ 4.08
HOXB7-201ENST00000239165 WIZO95785 1651 aa40.48■■■■■ 4.07
HOXB7-201ENST00000239165 CUX2O14529 1486 aa40.33■■■■■ 4.05
HOXB7-201ENST00000239165 LAMC3Q9Y6N6 1575 aa40.33■■■■■ 4.05
HOXB7-201ENST00000239165 CADPSQ9ULU8 1353 aa40.09■■■■■ 4.01
HOXB7-201ENST00000239165 TOP2AP11388 1531 aaKnown RBP40.07■■■■■ 4
HOXB7-201ENST00000239165 PDS5BQ9NTI5 1447 aa40.06■■■■■ 4
HOXB7-201ENST00000239165 KIF21AQ7Z4S6 1674 aa40.03■■■■■ 4
HOXB7-201ENST00000239165 THOC2Q8NI27 1593 aaKnown RBP40.03■■■■■ 4
HOXB7-201ENST00000239165 SUPT5HO00267 1087 aaKnown RBP39.87■■■■□ 3.97
HOXB7-201ENST00000239165 DNAJC5Q9H3Z4 198 aa39.81■■■■□ 3.96
HOXB7-201ENST00000239165 CFTRP13569 1480 aa39.74■■■■□ 3.95
HOXB7-201ENST00000239165 MRC2Q9UBG0 1479 aa39.68■■■■□ 3.94
HOXB7-201ENST00000239165 FANCD2Q9BXW9 1451 aa39.62■■■■□ 3.93
HOXB7-201ENST00000239165 CEP164Q9UPV0 1460 aa39.61■■■■□ 3.93
HOXB7-201ENST00000239165 WDR62O43379 1518 aa39.59■■■■□ 3.93
HOXB7-201ENST00000239165 CCDC88BA6NC98 1476 aa39.57■■■■□ 3.93
HOXB7-201ENST00000239165 PRDM2Q13029 1718 aa39.42■■■■□ 3.9
HOXB7-201ENST00000239165 URB2Q14146 1524 aaKnown RBP39.28■■■■□ 3.88
HOXB7-201ENST00000239165 TOPBP1Q92547 1522 aa38.93■■■■□ 3.82
HOXB7-201ENST00000239165 ABCC8Q09428 1581 aa38.9■■■■□ 3.82
HOXB7-201ENST00000239165 DNMBPQ6XZF7 1577 aa38.84■■■■□ 3.81
HOXB7-201ENST00000239165 IFT140Q96RY7 1462 aa38.82■■■■□ 3.8
HOXB7-201ENST00000239165 ZNF608Q9ULD9 1512 aaPredicted RBP38.72■■■■□ 3.79
HOXB7-201ENST00000239165 TARBP1Q13395 1621 aaKnown RBP38.58■■■■□ 3.77
HOXB7-201ENST00000239165 OSCARQ8IYS5 282 aa38.57■■■■□ 3.77
HOXB7-201ENST00000239165 POLA1P09884 1462 aaPredicted RBP38.56■■■■□ 3.76
HOXB7-201ENST00000239165 EIF4G3O43432 1585 aaKnown RBP38.52■■■■□ 3.76
HOXB7-201ENST00000239165 CUX1P39880 1505 aa38.44■■■■□ 3.74
HOXB7-201ENST00000239165 AQRO60306 1485 aaKnown RBP eCLIP38.42■■■■□ 3.74
HOXB7-201ENST00000239165 RAD54L2Q9Y4B4 1467 aa38.41■■■■□ 3.74
HOXB7-201ENST00000239165 SOGA1O94964 1423 aa38.4■■■■□ 3.74
HOXB7-201ENST00000239165 FGD5Q6ZNL6 1462 aa38.38■■■■□ 3.73
HOXB7-201ENST00000239165 WRNQ14191 1432 aaPredicted RBP eCLIP38.26■■■■□ 3.71
HOXB7-201ENST00000239165 TDRD9Q8NDG6 1382 aaKnown RBP38.25■■■■□ 3.71
HOXB7-201ENST00000239165 WDR97A6NE52 1622 aa38.22■■■■□ 3.71
HOXB7-201ENST00000239165 TRIM41Q8WV44 630 aa38.18■■■■□ 3.7
HOXB7-201ENST00000239165 CHD1O14646 1710 aa38.18■■■■□ 3.7
HOXB7-201ENST00000239165 TOP2BQ02880 1626 aa38.13■■■■□ 3.69
HOXB7-201ENST00000239165 SYNJ1O43426 1573 aa38.12■■■■□ 3.69
HOXB7-201ENST00000239165 BIVM-ERCC5R4GMW8 1640 aa38.12■■■■□ 3.69
HOXB7-201ENST00000239165 RIMBP3CA6NJZ7 1639 aa38.03■■■■□ 3.68
HOXB7-201ENST00000239165 RIMBP3BA6NNM3 1639 aa38.03■■■■□ 3.68
HOXB7-201ENST00000239165 RIMBP3Q9UFD9 1639 aa38.03■■■■□ 3.68
HOXB7-201ENST00000239165 FBLN2P98095 1184 aa38.03■■■■□ 3.68
HOXB7-201ENST00000239165 SNAPC4Q5SXM2 1469 aa38.03■■■■□ 3.68
HOXB7-201ENST00000239165 GRIN2BQ13224 1484 aa38.01■■■■□ 3.68
HOXB7-201ENST00000239165 ABCA10Q8WWZ4 1543 aa38■■■■□ 3.67
HOXB7-201ENST00000239165 MAGI1Q96QZ7 1491 aaPredicted RBP37.97■■■■□ 3.67
HOXB7-201ENST00000239165 ARHGEF11O15085 1522 aa37.94■■■■□ 3.66
HOXB7-201ENST00000239165 GAPVD1Q14C86 1478 aa37.94■■■■□ 3.66
HOXB7-201ENST00000239165 PBRM1Q86U86 1689 aa37.91■■■■□ 3.66
HOXB7-201ENST00000239165 ABCA5Q8WWZ7 1642 aa37.9■■■■□ 3.66
HOXB7-201ENST00000239165 CHMP7Q8WUX9 453 aaPredicted RBP37.85■■■■□ 3.65
HOXB7-201ENST00000239165 SYNJ2O15056 1496 aa37.83■■■■□ 3.65
HOXB7-201ENST00000239165 CLASP1Q7Z460 1538 aa37.75■■■■□ 3.63
HOXB7-201ENST00000239165 CHIC1Q5VXU3 224 aa37.68■■■■□ 3.62
HOXB7-201ENST00000239165 CYB5RLQ6IPT4 315 aa37.62■■■■□ 3.61
HOXB7-201ENST00000239165 ARAP1Q96P48 1450 aa37.6■■■■□ 3.61
HOXB7-201ENST00000239165 ADAMTS12P58397 1594 aa37.56■■■■□ 3.6
HOXB7-201ENST00000239165 ERICH3Q5RHP9 1530 aa37.52■■■■□ 3.6
HOXB7-201ENST00000239165 GRIN2AQ12879 1464 aa37.52■■■■□ 3.6
HOXB7-201ENST00000239165 FHAD1B1AJZ9 1412 aa37.48■■■■□ 3.59
HOXB7-201ENST00000239165 KIF27Q86VH2 1401 aa37.41■■■■□ 3.58
HOXB7-201ENST00000239165 NUP160Q12769 1436 aa37.39■■■■□ 3.58
HOXB7-201ENST00000239165 CEP170Q5SW79 1584 aa37.37■■■■□ 3.57
HOXB7-201ENST00000239165 RUSC2Q8N2Y8 1516 aa37.22■■■■□ 3.55
HOXB7-201ENST00000239165 IGF1RP08069 1367 aa37.21■■■■□ 3.55
HOXB7-201ENST00000239165 SHROOM2Q13796 1616 aa37.2■■■■□ 3.55
HOXB7-201ENST00000239165 ERCC6L2Q5T890 1561 aa37.18■■■■□ 3.54
HOXB7-201ENST00000239165 EEA1Q15075 1411 aa37.14■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms