RNA–Protein interactions for RNA: ENST00000369996.1

TNFRSF6B-201, Transcript of TNF receptor superfamily member 6b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF6B, Length 1,124 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6B-201ENST00000369996 NISCHQ9Y2I1 1504 aa55.17■■■■■ 6.42
TNFRSF6B-201ENST00000369996 CCDC180Q9P1Z9 1646 aa49.03■■■■■ 5.44
TNFRSF6B-201ENST00000369996 ABCC9O60706 1549 aa48.4■■■■■ 5.34
TNFRSF6B-201ENST00000369996 RB1CC1Q8TDY2 1594 aa46.27■■■■■ 5
TNFRSF6B-201ENST00000369996 DCAF8L2P0C7V8 631 aa46.24■■■■■ 4.99
TNFRSF6B-201ENST00000369996 NACADO15069 1562 aa46.14■■■■■ 4.98
TNFRSF6B-201ENST00000369996 ZCCHC6Q5VYS8 1495 aaKnown RBP45.93■■■■■ 4.94
TNFRSF6B-201ENST00000369996 MYO15BQ96JP2 1530 aa45.73■■■■■ 4.91
TNFRSF6B-201ENST00000369996 DCAF1Q9Y4B6 1507 aa45.52■■■■■ 4.88
TNFRSF6B-201ENST00000369996 UNC13AQ9UPW8 1703 aa45.34■■■■■ 4.85
TNFRSF6B-201ENST00000369996 PABPN1Q86U42 306 aaKnown RBP eCLIP45.24■■■■■ 4.83
TNFRSF6B-201ENST00000369996 BICRAQ9NZM4 1560 aa45.05■■■■■ 4.8
TNFRSF6B-201ENST00000369996 SCRIBQ14160 1630 aa44.93■■■■■ 4.78
TNFRSF6B-201ENST00000369996 DNAJC5BQ9UF47 199 aa44.72■■■■■ 4.75
TNFRSF6B-201ENST00000369996 SHROOM4Q9ULL8 1493 aa44.27■■■■■ 4.68
TNFRSF6B-201ENST00000369996 EIF4G1Q04637 1599 aaKnown RBP43.81■■■■■ 4.6
TNFRSF6B-201ENST00000369996 CC2D2AQ9P2K1 1620 aa43.7■■■■■ 4.59
TNFRSF6B-201ENST00000369996 CECR2Q9BXF3 1484 aa43.44■■■■■ 4.54
TNFRSF6B-201ENST00000369996 SMARCA4P51532 1647 aa42.86■■■■■ 4.45
TNFRSF6B-201ENST00000369996 BAZ1AQ9NRL2 1556 aaPredicted RBP42.7■■■■■ 4.43
TNFRSF6B-201ENST00000369996 ATAD2BQ9ULI0 1458 aa42.69■■■■■ 4.42
TNFRSF6B-201ENST00000369996 NCAPD3P42695 1498 aa42.63■■■■■ 4.42
TNFRSF6B-201ENST00000369996 MROH2BQ7Z745 1585 aa42.61■■■■■ 4.41
TNFRSF6B-201ENST00000369996 SMARCA2P51531 1590 aa42.52■■■■■ 4.4
TNFRSF6B-201ENST00000369996 HMGXB3Q12766 1538 aa42.39■■■■■ 4.38
TNFRSF6B-201ENST00000369996 PEG3Q9GZU2 1588 aa42.37■■■■■ 4.37
TNFRSF6B-201ENST00000369996 BAZ1BQ9UIG0 1483 aaKnown RBP42.3■■■■■ 4.36
TNFRSF6B-201ENST00000369996 WIZO95785 1651 aa42.13■■■■■ 4.34
TNFRSF6B-201ENST00000369996 RSF1Q96T23 1441 aaPredicted RBP42.01■■■■■ 4.32
TNFRSF6B-201ENST00000369996 NESP48681 1621 aa41.87■■■■■ 4.29
TNFRSF6B-201ENST00000369996 ERCC6Q03468 1493 aa41.61■■■■■ 4.25
TNFRSF6B-201ENST00000369996 TOP2AP11388 1531 aaKnown RBP41.59■■■■■ 4.25
TNFRSF6B-201ENST00000369996 LAMC3Q9Y6N6 1575 aa41.5■■■■■ 4.23
TNFRSF6B-201ENST00000369996 CADPSQ9ULU8 1353 aa41.39■■■■■ 4.22
TNFRSF6B-201ENST00000369996 KIF21AQ7Z4S6 1674 aa41.28■■■■■ 4.2
TNFRSF6B-201ENST00000369996 PDS5BQ9NTI5 1447 aa41.22■■■■■ 4.19
TNFRSF6B-201ENST00000369996 THOC2Q8NI27 1593 aaKnown RBP41.19■■■■■ 4.18
TNFRSF6B-201ENST00000369996 CUX2O14529 1486 aa41.18■■■■■ 4.18
TNFRSF6B-201ENST00000369996 CCDC88BA6NC98 1476 aa41.15■■■■■ 4.18
TNFRSF6B-201ENST00000369996 CFTRP13569 1480 aa41.11■■■■■ 4.17
TNFRSF6B-201ENST00000369996 FANCD2Q9BXW9 1451 aa40.96■■■■■ 4.15
TNFRSF6B-201ENST00000369996 MRC2Q9UBG0 1479 aa40.9■■■■■ 4.14
TNFRSF6B-201ENST00000369996 CEP164Q9UPV0 1460 aa40.9■■■■■ 4.14
TNFRSF6B-201ENST00000369996 SUPT5HO00267 1087 aaKnown RBP40.84■■■■■ 4.13
TNFRSF6B-201ENST00000369996 WDR62O43379 1518 aa40.77■■■■■ 4.12
TNFRSF6B-201ENST00000369996 PRDM2Q13029 1718 aa40.71■■■■■ 4.11
TNFRSF6B-201ENST00000369996 URB2Q14146 1524 aaKnown RBP40.64■■■■■ 4.1
TNFRSF6B-201ENST00000369996 DNAJC5Q9H3Z4 198 aa40.53■■■■■ 4.08
TNFRSF6B-201ENST00000369996 TOPBP1Q92547 1522 aa40.3■■■■■ 4.04
TNFRSF6B-201ENST00000369996 DNMBPQ6XZF7 1577 aa40.19■■■■■ 4.02
TNFRSF6B-201ENST00000369996 ABCC8Q09428 1581 aa40.09■■■■■ 4.01
TNFRSF6B-201ENST00000369996 ZNF608Q9ULD9 1512 aaPredicted RBP40.04■■■■■ 4
TNFRSF6B-201ENST00000369996 IFT140Q96RY7 1462 aa40.02■■■■■ 4
TNFRSF6B-201ENST00000369996 CUX1P39880 1505 aa39.98■■■■□ 3.99
TNFRSF6B-201ENST00000369996 POLA1P09884 1462 aaPredicted RBP39.95■■■■□ 3.99
TNFRSF6B-201ENST00000369996 TARBP1Q13395 1621 aaKnown RBP39.88■■■■□ 3.97
TNFRSF6B-201ENST00000369996 RAD54L2Q9Y4B4 1467 aa39.87■■■■□ 3.97
TNFRSF6B-201ENST00000369996 FGD5Q6ZNL6 1462 aa39.84■■■■□ 3.97
TNFRSF6B-201ENST00000369996 EIF4G3O43432 1585 aaKnown RBP39.79■■■■□ 3.96
TNFRSF6B-201ENST00000369996 AQRO60306 1485 aaKnown RBP eCLIP39.75■■■■□ 3.95
TNFRSF6B-201ENST00000369996 SOGA1O94964 1423 aa39.74■■■■□ 3.95
TNFRSF6B-201ENST00000369996 TDRD9Q8NDG6 1382 aaKnown RBP39.64■■■■□ 3.94
TNFRSF6B-201ENST00000369996 SYNJ1O43426 1573 aa39.58■■■■□ 3.93
TNFRSF6B-201ENST00000369996 WRNQ14191 1432 aaPredicted RBP eCLIP39.56■■■■□ 3.92
TNFRSF6B-201ENST00000369996 WDR97A6NE52 1622 aa39.5■■■■□ 3.91
TNFRSF6B-201ENST00000369996 TOP2BQ02880 1626 aa39.48■■■■□ 3.91
TNFRSF6B-201ENST00000369996 BIVM-ERCC5R4GMW8 1640 aa39.47■■■■□ 3.91
TNFRSF6B-201ENST00000369996 OSCARQ8IYS5 282 aa39.45■■■■□ 3.91
TNFRSF6B-201ENST00000369996 ABCA10Q8WWZ4 1543 aa39.37■■■■□ 3.89
TNFRSF6B-201ENST00000369996 SNAPC4Q5SXM2 1469 aa39.35■■■■□ 3.89
TNFRSF6B-201ENST00000369996 CHD1O14646 1710 aa39.32■■■■□ 3.89
TNFRSF6B-201ENST00000369996 GRIN2BQ13224 1484 aa39.28■■■■□ 3.88
TNFRSF6B-201ENST00000369996 GAPVD1Q14C86 1478 aa39.28■■■■□ 3.88
TNFRSF6B-201ENST00000369996 ABCA5Q8WWZ7 1642 aa39.28■■■■□ 3.88
TNFRSF6B-201ENST00000369996 FBLN2P98095 1184 aa39.26■■■■□ 3.88
TNFRSF6B-201ENST00000369996 PBRM1Q86U86 1689 aa39.22■■■■□ 3.87
TNFRSF6B-201ENST00000369996 MAGI1Q96QZ7 1491 aaPredicted RBP39.16■■■■□ 3.86
TNFRSF6B-201ENST00000369996 SYNJ2O15056 1496 aa39.05■■■■□ 3.84
TNFRSF6B-201ENST00000369996 CHMP7Q8WUX9 453 aaPredicted RBP39.04■■■■□ 3.84
TNFRSF6B-201ENST00000369996 RIMBP3CA6NJZ7 1639 aa38.96■■■■□ 3.83
TNFRSF6B-201ENST00000369996 RIMBP3BA6NNM3 1639 aa38.96■■■■□ 3.83
TNFRSF6B-201ENST00000369996 RIMBP3Q9UFD9 1639 aa38.96■■■■□ 3.83
TNFRSF6B-201ENST00000369996 TRIM41Q8WV44 630 aa38.95■■■■□ 3.83
TNFRSF6B-201ENST00000369996 ADAMTS12P58397 1594 aa38.94■■■■□ 3.82
TNFRSF6B-201ENST00000369996 ARHGEF11O15085 1522 aa38.92■■■■□ 3.82
TNFRSF6B-201ENST00000369996 CLASP1Q7Z460 1538 aa38.89■■■■□ 3.82
TNFRSF6B-201ENST00000369996 ERICH3Q5RHP9 1530 aa38.85■■■■□ 3.81
TNFRSF6B-201ENST00000369996 GRIN2AQ12879 1464 aa38.81■■■■□ 3.8
TNFRSF6B-201ENST00000369996 FHAD1B1AJZ9 1412 aa38.79■■■■□ 3.8
TNFRSF6B-201ENST00000369996 CEP170Q5SW79 1584 aa38.7■■■■□ 3.79
TNFRSF6B-201ENST00000369996 KIF27Q86VH2 1401 aa38.69■■■■□ 3.78
TNFRSF6B-201ENST00000369996 IGF1RP08069 1367 aa38.65■■■■□ 3.78
TNFRSF6B-201ENST00000369996 NUP160Q12769 1436 aa38.64■■■■□ 3.78
TNFRSF6B-201ENST00000369996 ARAP1Q96P48 1450 aa38.64■■■■□ 3.78
TNFRSF6B-201ENST00000369996 CYB5RLQ6IPT4 315 aa38.57■■■■□ 3.76
TNFRSF6B-201ENST00000369996 RUSC2Q8N2Y8 1516 aa38.51■■■■□ 3.76
TNFRSF6B-201ENST00000369996 ERCC6L2Q5T890 1561 aa38.48■■■■□ 3.75
TNFRSF6B-201ENST00000369996 CUL7Q14999 1698 aa38.45■■■■□ 3.75
TNFRSF6B-201ENST00000369996 CARMIL1Q5VZK9 1371 aa38.37■■■■□ 3.73
TNFRSF6B-201ENST00000369996 SHROOM2Q13796 1616 aa38.37■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms