RNA–Protein interactions for RNA: ENST00000375890.8

CASP9-203, Transcript of caspase 9, humanhuman

TSL 2 BASIC

Gene CASP9, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-203ENST00000375890 NISCHQ9Y2I1 1504 aa51.42■■■■■ 5.82
CASP9-203ENST00000375890 CCDC180Q9P1Z9 1646 aa45.38■■■■■ 4.85
CASP9-203ENST00000375890 ABCC9O60706 1549 aa43.26■■■■■ 4.52
CASP9-203ENST00000375890 ZCCHC6Q5VYS8 1495 aaKnown RBP43.05■■■■■ 4.48
CASP9-203ENST00000375890 DCAF1Q9Y4B6 1507 aa42.71■■■■■ 4.43
CASP9-203ENST00000375890 MYO15BQ96JP2 1530 aa42.58■■■■■ 4.41
CASP9-203ENST00000375890 NACADO15069 1562 aa42.43■■■■■ 4.38
CASP9-203ENST00000375890 DCAF8L2P0C7V8 631 aa42.41■■■■■ 4.38
CASP9-203ENST00000375890 RB1CC1Q8TDY2 1594 aa42.22■■■■■ 4.35
CASP9-203ENST00000375890 SCRIBQ14160 1630 aa41.3■■■■■ 4.2
CASP9-203ENST00000375890 UNC13AQ9UPW8 1703 aa41.14■■■■■ 4.18
CASP9-203ENST00000375890 SHROOM4Q9ULL8 1493 aa40.99■■■■■ 4.15
CASP9-203ENST00000375890 BICRAQ9NZM4 1560 aa40.78■■■■■ 4.12
CASP9-203ENST00000375890 PABPN1Q86U42 306 aaKnown RBP eCLIP40.52■■■■■ 4.08
CASP9-203ENST00000375890 BAZ1AQ9NRL2 1556 aaPredicted RBP39.84■■■■□ 3.97
CASP9-203ENST00000375890 CECR2Q9BXF3 1484 aa39.81■■■■□ 3.96
CASP9-203ENST00000375890 SMARCA4P51532 1647 aa39.68■■■■□ 3.94
CASP9-203ENST00000375890 EIF4G1Q04637 1599 aaKnown RBP39.68■■■■□ 3.94
CASP9-203ENST00000375890 MROH2BQ7Z745 1585 aa39.55■■■■□ 3.92
CASP9-203ENST00000375890 RSF1Q96T23 1441 aaPredicted RBP39.49■■■■□ 3.91
CASP9-203ENST00000375890 PEG3Q9GZU2 1588 aa39.36■■■■□ 3.89
CASP9-203ENST00000375890 SMARCA2P51531 1590 aa39.31■■■■□ 3.88
CASP9-203ENST00000375890 CC2D2AQ9P2K1 1620 aa39.24■■■■□ 3.87
CASP9-203ENST00000375890 ATAD2BQ9ULI0 1458 aa39.21■■■■□ 3.87
CASP9-203ENST00000375890 WIZO95785 1651 aa39.17■■■■□ 3.86
CASP9-203ENST00000375890 SUPT5HO00267 1087 aaKnown RBP39.12■■■■□ 3.85
CASP9-203ENST00000375890 NCAPD3P42695 1498 aa39.1■■■■□ 3.85
CASP9-203ENST00000375890 HMGXB3Q12766 1538 aa39.03■■■■□ 3.84
CASP9-203ENST00000375890 BAZ1BQ9UIG0 1483 aaKnown RBP38.97■■■■□ 3.83
CASP9-203ENST00000375890 TOP2AP11388 1531 aaKnown RBP38.93■■■■□ 3.82
CASP9-203ENST00000375890 DNAJC5BQ9UF47 199 aa38.7■■■■□ 3.79
CASP9-203ENST00000375890 CCDC88BA6NC98 1476 aa38.39■■■■□ 3.74
CASP9-203ENST00000375890 CADPSQ9ULU8 1353 aa37.99■■■■□ 3.67
CASP9-203ENST00000375890 CFTRP13569 1480 aa37.98■■■■□ 3.67
CASP9-203ENST00000375890 LAMC3Q9Y6N6 1575 aa37.95■■■■□ 3.66
CASP9-203ENST00000375890 PRDM2Q13029 1718 aa37.81■■■■□ 3.64
CASP9-203ENST00000375890 NESP48681 1621 aa37.69■■■■□ 3.62
CASP9-203ENST00000375890 PDS5BQ9NTI5 1447 aa37.66■■■■□ 3.62
CASP9-203ENST00000375890 FANCD2Q9BXW9 1451 aa37.53■■■■□ 3.6
CASP9-203ENST00000375890 CEP164Q9UPV0 1460 aa37.43■■■■□ 3.58
CASP9-203ENST00000375890 KIF21AQ7Z4S6 1674 aa37.34■■■■□ 3.57
CASP9-203ENST00000375890 ERCC6Q03468 1493 aa37.32■■■■□ 3.56
CASP9-203ENST00000375890 WRNQ14191 1432 aaPredicted RBP eCLIP37.26■■■■□ 3.56
CASP9-203ENST00000375890 ABCC8Q09428 1581 aa37.24■■■■□ 3.55
CASP9-203ENST00000375890 MRC2Q9UBG0 1479 aa37.16■■■■□ 3.54
CASP9-203ENST00000375890 CHIC1Q5VXU3 224 aa37.13■■■■□ 3.53
CASP9-203ENST00000375890 DNMBPQ6XZF7 1577 aa37.12■■■■□ 3.53
CASP9-203ENST00000375890 TOP2BQ02880 1626 aa37.09■■■■□ 3.53
CASP9-203ENST00000375890 BIVM-ERCC5R4GMW8 1640 aa37.08■■■■□ 3.53
CASP9-203ENST00000375890 CUX1P39880 1505 aa37.07■■■■□ 3.52
CASP9-203ENST00000375890 URB2Q14146 1524 aaKnown RBP37.03■■■■□ 3.52
CASP9-203ENST00000375890 SYNJ1O43426 1573 aa37.03■■■■□ 3.52
CASP9-203ENST00000375890 TOPBP1Q92547 1522 aa37.03■■■■□ 3.52
CASP9-203ENST00000375890 TRIM41Q8WV44 630 aa37.03■■■■□ 3.52
CASP9-203ENST00000375890 WDR62O43379 1518 aa37.02■■■■□ 3.52
CASP9-203ENST00000375890 THOC2Q8NI27 1593 aaKnown RBP37.01■■■■□ 3.52
CASP9-203ENST00000375890 FGD5Q6ZNL6 1462 aa36.81■■■■□ 3.48
CASP9-203ENST00000375890 POLA1P09884 1462 aaPredicted RBP36.77■■■■□ 3.48
CASP9-203ENST00000375890 SOGA1O94964 1423 aa36.65■■■■□ 3.46
CASP9-203ENST00000375890 CUX2O14529 1486 aa36.65■■■■□ 3.46
CASP9-203ENST00000375890 IFT140Q96RY7 1462 aa36.62■■■■□ 3.45
CASP9-203ENST00000375890 ABCA10Q8WWZ4 1543 aa36.58■■■■□ 3.45
CASP9-203ENST00000375890 TARBP1Q13395 1621 aaKnown RBP36.55■■■■□ 3.44
CASP9-203ENST00000375890 RAD54L2Q9Y4B4 1467 aa36.52■■■■□ 3.44
CASP9-203ENST00000375890 WDR97A6NE52 1622 aa36.5■■■■□ 3.43
CASP9-203ENST00000375890 EEA1Q15075 1411 aa36.49■■■■□ 3.43
CASP9-203ENST00000375890 KIF27Q86VH2 1401 aa36.46■■■■□ 3.43
CASP9-203ENST00000375890 ABCA5Q8WWZ7 1642 aa36.31■■■■□ 3.4
CASP9-203ENST00000375890 GAPVD1Q14C86 1478 aa36.26■■■■□ 3.4
CASP9-203ENST00000375890 TDRD9Q8NDG6 1382 aaKnown RBP36.25■■■■□ 3.39
CASP9-203ENST00000375890 ZNF608Q9ULD9 1512 aaPredicted RBP36.22■■■■□ 3.39
CASP9-203ENST00000375890 EIF4G3O43432 1585 aaKnown RBP36.21■■■■□ 3.39
CASP9-203ENST00000375890 RUSC2Q8N2Y8 1516 aa36.2■■■■□ 3.39
CASP9-203ENST00000375890 ERICH3Q5RHP9 1530 aa36.19■■■■□ 3.38
CASP9-203ENST00000375890 AQRO60306 1485 aaKnown RBP eCLIP36.16■■■■□ 3.383e-6■■■□□ 17.3
CASP9-203ENST00000375890 GRIN2BQ13224 1484 aa36.16■■■■□ 3.38
CASP9-203ENST00000375890 CSRNP3Q8WYN3 585 aa36.15■■■■□ 3.38
CASP9-203ENST00000375890 PBRM1Q86U86 1689 aa36.11■■■■□ 3.37
CASP9-203ENST00000375890 IGF1RP08069 1367 aa36.1■■■■□ 3.37
CASP9-203ENST00000375890 FAM9AQ8IZU1 332 aaPredicted RBP36.06■■■■□ 3.36
CASP9-203ENST00000375890 CUL7Q14999 1698 aa36.06■■■■□ 3.36
CASP9-203ENST00000375890 MAGI1Q96QZ7 1491 aaPredicted RBP36■■■■□ 3.35
CASP9-203ENST00000375890 PRXQ9BXM0 1461 aa35.96■■■■□ 3.35
CASP9-203ENST00000375890 KIF21BO75037 1637 aa35.94■■■■□ 3.34
CASP9-203ENST00000375890 CARMIL1Q5VZK9 1371 aa35.93■■■■□ 3.34
CASP9-203ENST00000375890 FHAD1B1AJZ9 1412 aa35.92■■■■□ 3.34
CASP9-203ENST00000375890 SNAPC4Q5SXM2 1469 aa35.9■■■■□ 3.34
CASP9-203ENST00000375890 ADAMTS12P58397 1594 aa35.9■■■■□ 3.34
CASP9-203ENST00000375890 RAPGEF2Q9Y4G8 1499 aa35.86■■■■□ 3.33
CASP9-203ENST00000375890 SYNJ2O15056 1496 aa35.81■■■■□ 3.32
CASP9-203ENST00000375890 GOLGA3Q08378 1498 aa35.8■■■■□ 3.32
CASP9-203ENST00000375890 CHMP7Q8WUX9 453 aaPredicted RBP35.67■■■■□ 3.3
CASP9-203ENST00000375890 GRIN2AQ12879 1464 aa35.67■■■■□ 3.3
CASP9-203ENST00000375890 UBTFP17480 764 aaKnown RBP35.55■■■■□ 3.28
CASP9-203ENST00000375890 FBLN2P98095 1184 aa35.53■■■■□ 3.28
CASP9-203ENST00000375890 CHD1O14646 1710 aa35.53■■■■□ 3.28
CASP9-203ENST00000375890 TNIKQ9UKE5 1360 aa35.53■■■■□ 3.28
CASP9-203ENST00000375890 LOC105371045A0A1W2PR82 267 aa35.49■■■■□ 3.27
CASP9-203ENST00000375890 NUP160Q12769 1436 aa35.48■■■■□ 3.27
CASP9-203ENST00000375890 CTTNBP2Q8WZ74 1663 aa35.46■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms