RNA–Protein interactions for RNA: ENST00000586400.5

TMEM235-205, Transcript of transmembrane protein 235, humanhuman

TSL 1 (best) BASIC

Gene TMEM235, Length 2,272 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235-205ENST00000586400 NISCHQ9Y2I1 1504 aa47.07■■■■■ 5.13
TMEM235-205ENST00000586400 CCDC180Q9P1Z9 1646 aa40.33■■■■■ 4.05
TMEM235-205ENST00000586400 ZCCHC6Q5VYS8 1495 aaKnown RBP39.72■■■■□ 3.95
TMEM235-205ENST00000586400 SHROOM4Q9ULL8 1493 aa39.45■■■■□ 3.91
TMEM235-205ENST00000586400 DCAF8L2P0C7V8 631 aa38.85■■■■□ 3.81
TMEM235-205ENST00000586400 DCAF1Q9Y4B6 1507 aa38.75■■■■□ 3.79
TMEM235-205ENST00000586400 SUPT5HO00267 1087 aaKnown RBP38.46■■■■□ 3.75
TMEM235-205ENST00000586400 MYO15BQ96JP2 1530 aa37.86■■■■□ 3.65
TMEM235-205ENST00000586400 ABCC9O60706 1549 aa37.57■■■■□ 3.61
TMEM235-205ENST00000586400 SCRIBQ14160 1630 aa37.52■■■■□ 3.6
TMEM235-205ENST00000586400 NACADO15069 1562 aa37.39■■■■□ 3.58
TMEM235-205ENST00000586400 CHIC1Q5VXU3 224 aa37.3■■■■□ 3.56
TMEM235-205ENST00000586400 RSF1Q96T23 1441 aaPredicted RBP37.01■■■■□ 3.52
TMEM235-205ENST00000586400 RB1CC1Q8TDY2 1594 aa36.84■■■■□ 3.49
TMEM235-205ENST00000586400 CECR2Q9BXF3 1484 aa36.67■■■■□ 3.46
TMEM235-205ENST00000586400 MROH2BQ7Z745 1585 aa36.51■■■■□ 3.44
TMEM235-205ENST00000586400 UNC13AQ9UPW8 1703 aa36.28■■■■□ 3.4
TMEM235-205ENST00000586400 WIZO95785 1651 aa36.27■■■■□ 3.4
TMEM235-205ENST00000586400 BAZ1AQ9NRL2 1556 aaPredicted RBP36.18■■■■□ 3.38
TMEM235-205ENST00000586400 LOC105371045A0A1W2PR82 267 aa36.07■■■■□ 3.36
TMEM235-205ENST00000586400 TRIM41Q8WV44 630 aa35.95■■■■□ 3.35
TMEM235-205ENST00000586400 SMARCA4P51532 1647 aa35.94■■■■□ 3.34
TMEM235-205ENST00000586400 BICRAQ9NZM4 1560 aa35.89■■■■□ 3.34
TMEM235-205ENST00000586400 PABPN1Q86U42 306 aaKnown RBP eCLIP35.78■■■■□ 3.32
TMEM235-205ENST00000586400 TOP2AP11388 1531 aaKnown RBP35.76■■■■□ 3.31
TMEM235-205ENST00000586400 EIF4G1Q04637 1599 aaKnown RBP35.66■■■■□ 3.3
TMEM235-205ENST00000586400 CCDC88BA6NC98 1476 aa35.57■■■■□ 3.28
TMEM235-205ENST00000586400 SMARCA2P51531 1590 aa35.54■■■■□ 3.28
TMEM235-205ENST00000586400 FAM9AQ8IZU1 332 aaPredicted RBP35.5■■■■□ 3.27
TMEM235-205ENST00000586400 PCGF6Q9BYE7 350 aa35.46■■■■□ 3.27
TMEM235-205ENST00000586400 PEG3Q9GZU2 1588 aa35.38■■■■□ 3.25
TMEM235-205ENST00000586400 ABCC8Q09428 1581 aa35.22■■■■□ 3.23
TMEM235-205ENST00000586400 HRCP23327 699 aa35.19■■■■□ 3.22
TMEM235-205ENST00000586400 ATAD2BQ9ULI0 1458 aa35.15■■■■□ 3.22
TMEM235-205ENST00000586400 EHMT2Q96KQ7 1210 aa35.09■■■■□ 3.21
TMEM235-205ENST00000586400 TRIM26Q12899 539 aaPredicted RBP35.03■■■■□ 3.2
TMEM235-205ENST00000586400 BAZ1BQ9UIG0 1483 aaKnown RBP34.96■■■■□ 3.19
TMEM235-205ENST00000586400 SOGA1O94964 1423 aa34.81■■■■□ 3.16
TMEM235-205ENST00000586400 WRNQ14191 1432 aaPredicted RBP eCLIP34.75■■■■□ 3.15
TMEM235-205ENST00000586400 RUSC2Q8N2Y8 1516 aa34.66■■■■□ 3.14
TMEM235-205ENST00000586400 EEA1Q15075 1411 aa34.64■■■■□ 3.14
TMEM235-205ENST00000586400 NCAPD3P42695 1498 aa34.61■■■■□ 3.13
TMEM235-205ENST00000586400 SYNJ1O43426 1573 aa34.61■■■■□ 3.13
TMEM235-205ENST00000586400 CSRNP3Q8WYN3 585 aa34.58■■■■□ 3.13
TMEM235-205ENST00000586400 HMGXB3Q12766 1538 aa34.56■■■■□ 3.12
TMEM235-205ENST00000586400 TNIKQ9UKE5 1360 aa34.45■■■■□ 3.11
TMEM235-205ENST00000586400 PPARGC1BQ86YN6 1023 aaKnown RBP34.44■■■■□ 3.1
TMEM235-205ENST00000586400 CEP162Q5TB80 1403 aa34.4■■■■□ 3.1
TMEM235-205ENST00000586400 GOLGA3Q08378 1498 aa34.31■■■■□ 3.08
TMEM235-205ENST00000586400 TOP2BQ02880 1626 aa34.28■■■■□ 3.08
TMEM235-205ENST00000586400 UBTFP17480 764 aaKnown RBP34.28■■■■□ 3.08
TMEM235-205ENST00000586400 KIF21BO75037 1637 aa34.19■■■■□ 3.06
TMEM235-205ENST00000586400 CEP164Q9UPV0 1460 aa34.19■■■■□ 3.06
TMEM235-205ENST00000586400 BIVM-ERCC5R4GMW8 1640 aa34.18■■■■□ 3.06
TMEM235-205ENST00000586400 CFTRP13569 1480 aa34.16■■■■□ 3.06
TMEM235-205ENST00000586400 CUX1P39880 1505 aa34.04■■■■□ 3.04
TMEM235-205ENST00000586400 ZEB1P37275 1124 aaPredicted RBP34.02■■■■□ 3.04
TMEM235-205ENST00000586400 RAPGEF2Q9Y4G8 1499 aa34■■■■□ 3.03
TMEM235-205ENST00000586400 CC2D2AQ9P2K1 1620 aa33.93■■■■□ 3.02
TMEM235-205ENST00000586400 PRDM2Q13029 1718 aa33.87■■■■□ 3.01
TMEM235-205ENST00000586400 CLIP1P30622 1438 aa33.87■■■■□ 3.01
TMEM235-205ENST00000586400 CADPSQ9ULU8 1353 aa33.85■■■■□ 3.01
TMEM235-205ENST00000586400 TTBK1Q5TCY1 1321 aaPredicted RBP33.84■■■■□ 3.01
TMEM235-205ENST00000586400 PRXQ9BXM0 1461 aa33.81■■■■□ 3
TMEM235-205ENST00000586400 ERICH3Q5RHP9 1530 aa33.75■■■□□ 2.99
TMEM235-205ENST00000586400 KIF27Q86VH2 1401 aa33.73■■■□□ 2.99
TMEM235-205ENST00000586400 VPS8Q8N3P4 1428 aa33.69■■■□□ 2.98
TMEM235-205ENST00000586400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.65■■■□□ 2.98
TMEM235-205ENST00000586400 RANGAP1P46060 587 aaPredicted RBP33.59■■■□□ 2.97
TMEM235-205ENST00000586400 CCER1Q8TC90 406 aaPredicted RBP33.51■■■□□ 2.95
TMEM235-205ENST00000586400 CUX2O14529 1486 aa33.48■■■□□ 2.95
TMEM235-205ENST00000586400 FGD5Q6ZNL6 1462 aa33.48■■■□□ 2.95
TMEM235-205ENST00000586400 FANCD2Q9BXW9 1451 aa33.48■■■□□ 2.95
TMEM235-205ENST00000586400 IGF1RP08069 1367 aa33.45■■■□□ 2.94
TMEM235-205ENST00000586400 ARAP1Q96P48 1450 aa33.44■■■□□ 2.94
TMEM235-205ENST00000586400 APLP2Q06481 763 aa33.39■■■□□ 2.93
TMEM235-205ENST00000586400 NESP48681 1621 aa33.37■■■□□ 2.93
TMEM235-205ENST00000586400 DNMBPQ6XZF7 1577 aa33.28■■■□□ 2.92
TMEM235-205ENST00000586400 CARMIL1Q5VZK9 1371 aa33.25■■■□□ 2.91
TMEM235-205ENST00000586400 ARHGAP35Q9NRY4 1499 aa33.25■■■□□ 2.91
TMEM235-205ENST00000586400 TOPBP1Q92547 1522 aa33.23■■■□□ 2.91
TMEM235-205ENST00000586400 RAD54L2Q9Y4B4 1467 aa33.18■■■□□ 2.9
TMEM235-205ENST00000586400 LAMC3Q9Y6N6 1575 aa33.18■■■□□ 2.9
TMEM235-205ENST00000586400 POLA1P09884 1462 aaPredicted RBP33.18■■■□□ 2.9
TMEM235-205ENST00000586400 HNRNPUL2Q1KMD3 747 aaKnown RBP33.17■■■□□ 2.9
TMEM235-205ENST00000586400 ABCA10Q8WWZ4 1543 aa33.15■■■□□ 2.9
TMEM235-205ENST00000586400 DNAJC5BQ9UF47 199 aa33.14■■■□□ 2.9
TMEM235-205ENST00000586400 KANK4Q5T7N3 995 aaPredicted RBP33.13■■■□□ 2.89
TMEM235-205ENST00000586400 URB2Q14146 1524 aaKnown RBP33.05■■■□□ 2.88
TMEM235-205ENST00000586400 PDS5BQ9NTI5 1447 aa32.95■■■□□ 2.86
TMEM235-205ENST00000586400 WDR97A6NE52 1622 aa32.9■■■□□ 2.86
TMEM235-205ENST00000586400 RRBP1Q9P2E9 1410 aaKnown RBP32.87■■■□□ 2.85
TMEM235-205ENST00000586400 CUL7Q14999 1698 aa32.87■■■□□ 2.85
TMEM235-205ENST00000586400 KIF21AQ7Z4S6 1674 aa32.82■■■□□ 2.84
TMEM235-205ENST00000586400 MAP3K1Q13233 1512 aa32.81■■■□□ 2.84
TMEM235-205ENST00000586400 TDRD9Q8NDG6 1382 aaKnown RBP32.78■■■□□ 2.84
TMEM235-205ENST00000586400 TIAM1Q13009 1591 aa32.78■■■□□ 2.84
TMEM235-205ENST00000586400 ABCA5Q8WWZ7 1642 aa32.77■■■□□ 2.84
TMEM235-205ENST00000586400 P3H3Q8IVL6 736 aa32.74■■■□□ 2.83
TMEM235-205ENST00000586400 FHAD1B1AJZ9 1412 aa32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms