RNA–Protein interactions for RNA: ENST00000586400.5

TMEM235-205, Transcript of transmembrane protein 235, humanhuman

TSL 1 (best) BASIC

Gene TMEM235, Length 2,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235-205ENST00000586400 NISCHQ9Y2I1 1504 aa47.07■■■■■ 5.13
TMEM235-205ENST00000586400 CCDC180Q9P1Z9 1646 aa40.33■■■■■ 4.05
TMEM235-205ENST00000586400 ZCCHC6Q5VYS8 1495 aaKnown RBP39.72■■■■□ 3.95
TMEM235-205ENST00000586400 SHROOM4Q9ULL8 1493 aa39.45■■■■□ 3.91
TMEM235-205ENST00000586400 DCAF8L2P0C7V8 631 aa38.85■■■■□ 3.81
TMEM235-205ENST00000586400 DCAF1Q9Y4B6 1507 aa38.75■■■■□ 3.79
TMEM235-205ENST00000586400 SUPT5HO00267 1087 aaKnown RBP38.46■■■■□ 3.75
TMEM235-205ENST00000586400 MYO15BQ96JP2 1530 aa37.86■■■■□ 3.65
TMEM235-205ENST00000586400 ABCC9O60706 1549 aa37.57■■■■□ 3.61
TMEM235-205ENST00000586400 SCRIBQ14160 1630 aa37.52■■■■□ 3.6
TMEM235-205ENST00000586400 NACADO15069 1562 aa37.39■■■■□ 3.58
TMEM235-205ENST00000586400 CHIC1Q5VXU3 224 aa37.3■■■■□ 3.56
TMEM235-205ENST00000586400 RSF1Q96T23 1441 aaPredicted RBP37.01■■■■□ 3.52
TMEM235-205ENST00000586400 RB1CC1Q8TDY2 1594 aa36.84■■■■□ 3.49
TMEM235-205ENST00000586400 CECR2Q9BXF3 1484 aa36.67■■■■□ 3.46
TMEM235-205ENST00000586400 MROH2BQ7Z745 1585 aa36.51■■■■□ 3.44
TMEM235-205ENST00000586400 UNC13AQ9UPW8 1703 aa36.28■■■■□ 3.4
TMEM235-205ENST00000586400 WIZO95785 1651 aa36.27■■■■□ 3.4
TMEM235-205ENST00000586400 BAZ1AQ9NRL2 1556 aaPredicted RBP36.18■■■■□ 3.38
TMEM235-205ENST00000586400 LOC105371045A0A1W2PR82 267 aa36.07■■■■□ 3.36
TMEM235-205ENST00000586400 TRIM41Q8WV44 630 aa35.95■■■■□ 3.35
TMEM235-205ENST00000586400 SMARCA4P51532 1647 aa35.94■■■■□ 3.34
TMEM235-205ENST00000586400 BICRAQ9NZM4 1560 aa35.89■■■■□ 3.34
TMEM235-205ENST00000586400 PABPN1Q86U42 306 aaKnown RBP eCLIP35.78■■■■□ 3.32
TMEM235-205ENST00000586400 TOP2AP11388 1531 aaKnown RBP35.76■■■■□ 3.31
TMEM235-205ENST00000586400 EIF4G1Q04637 1599 aaKnown RBP35.66■■■■□ 3.3
TMEM235-205ENST00000586400 CCDC88BA6NC98 1476 aa35.57■■■■□ 3.28
TMEM235-205ENST00000586400 SMARCA2P51531 1590 aa35.54■■■■□ 3.28
TMEM235-205ENST00000586400 FAM9AQ8IZU1 332 aaPredicted RBP35.5■■■■□ 3.27
TMEM235-205ENST00000586400 PCGF6Q9BYE7 350 aa35.46■■■■□ 3.27
TMEM235-205ENST00000586400 PEG3Q9GZU2 1588 aa35.38■■■■□ 3.25
TMEM235-205ENST00000586400 ABCC8Q09428 1581 aa35.22■■■■□ 3.23
TMEM235-205ENST00000586400 HRCP23327 699 aa35.19■■■■□ 3.22
TMEM235-205ENST00000586400 ATAD2BQ9ULI0 1458 aa35.15■■■■□ 3.22
TMEM235-205ENST00000586400 EHMT2Q96KQ7 1210 aa35.09■■■■□ 3.21
TMEM235-205ENST00000586400 TRIM26Q12899 539 aaPredicted RBP35.03■■■■□ 3.2
TMEM235-205ENST00000586400 BAZ1BQ9UIG0 1483 aaKnown RBP34.96■■■■□ 3.19
TMEM235-205ENST00000586400 SOGA1O94964 1423 aa34.81■■■■□ 3.16
TMEM235-205ENST00000586400 WRNQ14191 1432 aaPredicted RBP eCLIP34.75■■■■□ 3.15
TMEM235-205ENST00000586400 RUSC2Q8N2Y8 1516 aa34.66■■■■□ 3.14
TMEM235-205ENST00000586400 EEA1Q15075 1411 aa34.64■■■■□ 3.14
TMEM235-205ENST00000586400 NCAPD3P42695 1498 aa34.61■■■■□ 3.13
TMEM235-205ENST00000586400 SYNJ1O43426 1573 aa34.61■■■■□ 3.13
TMEM235-205ENST00000586400 CSRNP3Q8WYN3 585 aa34.58■■■■□ 3.13
TMEM235-205ENST00000586400 HMGXB3Q12766 1538 aa34.56■■■■□ 3.12
TMEM235-205ENST00000586400 TNIKQ9UKE5 1360 aa34.45■■■■□ 3.11
TMEM235-205ENST00000586400 PPARGC1BQ86YN6 1023 aaKnown RBP34.44■■■■□ 3.1
TMEM235-205ENST00000586400 CEP162Q5TB80 1403 aa34.4■■■■□ 3.1
TMEM235-205ENST00000586400 GOLGA3Q08378 1498 aa34.31■■■■□ 3.08
TMEM235-205ENST00000586400 TOP2BQ02880 1626 aa34.28■■■■□ 3.08
TMEM235-205ENST00000586400 UBTFP17480 764 aaKnown RBP34.28■■■■□ 3.08
TMEM235-205ENST00000586400 KIF21BO75037 1637 aa34.19■■■■□ 3.06
TMEM235-205ENST00000586400 CEP164Q9UPV0 1460 aa34.19■■■■□ 3.06
TMEM235-205ENST00000586400 BIVM-ERCC5R4GMW8 1640 aa34.18■■■■□ 3.06
TMEM235-205ENST00000586400 CFTRP13569 1480 aa34.16■■■■□ 3.06
TMEM235-205ENST00000586400 CUX1P39880 1505 aa34.04■■■■□ 3.04
TMEM235-205ENST00000586400 ZEB1P37275 1124 aaPredicted RBP34.02■■■■□ 3.04
TMEM235-205ENST00000586400 RAPGEF2Q9Y4G8 1499 aa34■■■■□ 3.03
TMEM235-205ENST00000586400 CC2D2AQ9P2K1 1620 aa33.93■■■■□ 3.02
TMEM235-205ENST00000586400 PRDM2Q13029 1718 aa33.87■■■■□ 3.01
TMEM235-205ENST00000586400 CLIP1P30622 1438 aa33.87■■■■□ 3.01
TMEM235-205ENST00000586400 CADPSQ9ULU8 1353 aa33.85■■■■□ 3.01
TMEM235-205ENST00000586400 TTBK1Q5TCY1 1321 aaPredicted RBP33.84■■■■□ 3.01
TMEM235-205ENST00000586400 PRXQ9BXM0 1461 aa33.81■■■■□ 3
TMEM235-205ENST00000586400 ERICH3Q5RHP9 1530 aa33.75■■■□□ 2.99
TMEM235-205ENST00000586400 KIF27Q86VH2 1401 aa33.73■■■□□ 2.99
TMEM235-205ENST00000586400 VPS8Q8N3P4 1428 aa33.69■■■□□ 2.98
TMEM235-205ENST00000586400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.65■■■□□ 2.98
TMEM235-205ENST00000586400 RANGAP1P46060 587 aaPredicted RBP33.59■■■□□ 2.97
TMEM235-205ENST00000586400 CCER1Q8TC90 406 aaPredicted RBP33.51■■■□□ 2.95
TMEM235-205ENST00000586400 CUX2O14529 1486 aa33.48■■■□□ 2.95
TMEM235-205ENST00000586400 FGD5Q6ZNL6 1462 aa33.48■■■□□ 2.95
TMEM235-205ENST00000586400 FANCD2Q9BXW9 1451 aa33.48■■■□□ 2.95
TMEM235-205ENST00000586400 IGF1RP08069 1367 aa33.45■■■□□ 2.94
TMEM235-205ENST00000586400 ARAP1Q96P48 1450 aa33.44■■■□□ 2.94
TMEM235-205ENST00000586400 APLP2Q06481 763 aa33.39■■■□□ 2.93
TMEM235-205ENST00000586400 NESP48681 1621 aa33.37■■■□□ 2.93
TMEM235-205ENST00000586400 DNMBPQ6XZF7 1577 aa33.28■■■□□ 2.92
TMEM235-205ENST00000586400 CARMIL1Q5VZK9 1371 aa33.25■■■□□ 2.91
TMEM235-205ENST00000586400 ARHGAP35Q9NRY4 1499 aa33.25■■■□□ 2.91
TMEM235-205ENST00000586400 TOPBP1Q92547 1522 aa33.23■■■□□ 2.91
TMEM235-205ENST00000586400 RAD54L2Q9Y4B4 1467 aa33.18■■■□□ 2.9
TMEM235-205ENST00000586400 LAMC3Q9Y6N6 1575 aa33.18■■■□□ 2.9
TMEM235-205ENST00000586400 POLA1P09884 1462 aaPredicted RBP33.18■■■□□ 2.9
TMEM235-205ENST00000586400 HNRNPUL2Q1KMD3 747 aaKnown RBP33.17■■■□□ 2.9
TMEM235-205ENST00000586400 ABCA10Q8WWZ4 1543 aa33.15■■■□□ 2.9
TMEM235-205ENST00000586400 DNAJC5BQ9UF47 199 aa33.14■■■□□ 2.9
TMEM235-205ENST00000586400 KANK4Q5T7N3 995 aaPredicted RBP33.13■■■□□ 2.89
TMEM235-205ENST00000586400 URB2Q14146 1524 aaKnown RBP33.05■■■□□ 2.88
TMEM235-205ENST00000586400 PDS5BQ9NTI5 1447 aa32.95■■■□□ 2.86
TMEM235-205ENST00000586400 WDR97A6NE52 1622 aa32.9■■■□□ 2.86
TMEM235-205ENST00000586400 RRBP1Q9P2E9 1410 aaKnown RBP32.87■■■□□ 2.85
TMEM235-205ENST00000586400 CUL7Q14999 1698 aa32.87■■■□□ 2.85
TMEM235-205ENST00000586400 KIF21AQ7Z4S6 1674 aa32.82■■■□□ 2.84
TMEM235-205ENST00000586400 MAP3K1Q13233 1512 aa32.81■■■□□ 2.84
TMEM235-205ENST00000586400 TDRD9Q8NDG6 1382 aaKnown RBP32.78■■■□□ 2.84
TMEM235-205ENST00000586400 TIAM1Q13009 1591 aa32.78■■■□□ 2.84
TMEM235-205ENST00000586400 ABCA5Q8WWZ7 1642 aa32.77■■■□□ 2.84
TMEM235-205ENST00000586400 P3H3Q8IVL6 736 aa32.74■■■□□ 2.83
TMEM235-205ENST00000586400 FHAD1B1AJZ9 1412 aa32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms