RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 NISCHQ9Y2I1 1504 aa51.58■■■■■ 5.85
EPCAM-202ENST00000405271 CCDC180Q9P1Z9 1646 aa45.62■■■■■ 4.89
EPCAM-202ENST00000405271 ABCC9O60706 1549 aa44.71■■■■■ 4.75
EPCAM-202ENST00000405271 ZCCHC6Q5VYS8 1495 aaKnown RBP43.23■■■■■ 4.51
EPCAM-202ENST00000405271 DCAF8L2P0C7V8 631 aa42.85■■■■■ 4.45
EPCAM-202ENST00000405271 RB1CC1Q8TDY2 1594 aa42.81■■■■■ 4.44
EPCAM-202ENST00000405271 DCAF1Q9Y4B6 1507 aa42.79■■■■■ 4.44
EPCAM-202ENST00000405271 NACADO15069 1562 aa42.73■■■■■ 4.43
EPCAM-202ENST00000405271 MYO15BQ96JP2 1530 aa42.58■■■■■ 4.41
EPCAM-202ENST00000405271 PABPN1Q86U42 306 aaKnown RBP eCLIP41.84■■■■■ 4.29
EPCAM-202ENST00000405271 UNC13AQ9UPW8 1703 aa41.74■■■■■ 4.27
EPCAM-202ENST00000405271 SCRIBQ14160 1630 aa41.57■■■■■ 4.25
EPCAM-202ENST00000405271 BICRAQ9NZM4 1560 aa41.56■■■■■ 4.24
EPCAM-202ENST00000405271 DNAJC5BQ9UF47 199 aa41.4■■■■■ 4.22
EPCAM-202ENST00000405271 SHROOM4Q9ULL8 1493 aa41.23■■■■■ 4.19
EPCAM-202ENST00000405271 EIF4G1Q04637 1599 aaKnown RBP40.47■■■■■ 4.07
EPCAM-202ENST00000405271 CC2D2AQ9P2K1 1620 aa40.37■■■■■ 4.05
EPCAM-202ENST00000405271 CECR2Q9BXF3 1484 aa40.2■■■■■ 4.03
EPCAM-202ENST00000405271 BAZ1AQ9NRL2 1556 aaPredicted RBP39.97■■■■□ 3.99
EPCAM-202ENST00000405271 SMARCA4P51532 1647 aa39.9■■■■□ 3.98
EPCAM-202ENST00000405271 MROH2BQ7Z745 1585 aa39.75■■■■□ 3.95
EPCAM-202ENST00000405271 RSF1Q96T23 1441 aaPredicted RBP39.61■■■■□ 3.93
EPCAM-202ENST00000405271 NCAPD3P42695 1498 aa39.51■■■■□ 3.92
EPCAM-202ENST00000405271 PEG3Q9GZU2 1588 aa39.49■■■■□ 3.91
EPCAM-202ENST00000405271 ATAD2BQ9ULI0 1458 aa39.48■■■■□ 3.91
EPCAM-202ENST00000405271 WIZO95785 1651 aa39.48■■■■□ 3.91
EPCAM-202ENST00000405271 SMARCA2P51531 1590 aa39.38■■■■□ 3.9
EPCAM-202ENST00000405271 SUPT5HO00267 1087 aaKnown RBP39.27■■■■□ 3.88
EPCAM-202ENST00000405271 HMGXB3Q12766 1538 aa39.19■■■■□ 3.86
EPCAM-202ENST00000405271 BAZ1BQ9UIG0 1483 aaKnown RBP39.11■■■■□ 3.85
EPCAM-202ENST00000405271 TOP2AP11388 1531 aaKnown RBP39.1■■■■□ 3.85
EPCAM-202ENST00000405271 NESP48681 1621 aa38.62■■■■□ 3.77
EPCAM-202ENST00000405271 ERCC6Q03468 1493 aa38.53■■■■□ 3.76
EPCAM-202ENST00000405271 CCDC88BA6NC98 1476 aa38.52■■■■□ 3.76
EPCAM-202ENST00000405271 LAMC3Q9Y6N6 1575 aa38.4■■■■□ 3.74
EPCAM-202ENST00000405271 CADPSQ9ULU8 1353 aa38.37■■■■□ 3.73
EPCAM-202ENST00000405271 PDS5BQ9NTI5 1447 aa38.24■■■■□ 3.71
EPCAM-202ENST00000405271 PRDM2Q13029 1718 aa38.22■■■■□ 3.71
EPCAM-202ENST00000405271 CUX2O14529 1486 aa38.19■■■■□ 3.7
EPCAM-202ENST00000405271 CFTRP13569 1480 aa38.06■■■■□ 3.68
EPCAM-202ENST00000405271 KIF21AQ7Z4S6 1674 aa38.02■■■■□ 3.68
EPCAM-202ENST00000405271 THOC2Q8NI27 1593 aaKnown RBP37.98■■■■□ 3.67
EPCAM-202ENST00000405271 FANCD2Q9BXW9 1451 aa37.88■■■■□ 3.65
EPCAM-202ENST00000405271 MRC2Q9UBG0 1479 aa37.82■■■■□ 3.64
EPCAM-202ENST00000405271 CEP164Q9UPV0 1460 aa37.82■■■■□ 3.64
EPCAM-202ENST00000405271 WDR62O43379 1518 aa37.68■■■■□ 3.62
EPCAM-202ENST00000405271 URB2Q14146 1524 aaKnown RBP37.51■■■■□ 3.6
EPCAM-202ENST00000405271 ABCC8Q09428 1581 aa37.5■■■■□ 3.59
EPCAM-202ENST00000405271 DNAJC5Q9H3Z4 198 aa37.45■■■■□ 3.59
EPCAM-202ENST00000405271 WRNQ14191 1432 aaPredicted RBP eCLIP37.36■■■■□ 3.57
EPCAM-202ENST00000405271 BIVM-ERCC5R4GMW8 1640 aa37.35■■■■□ 3.57
EPCAM-202ENST00000405271 SYNJ1O43426 1573 aa37.31■■■■□ 3.56
EPCAM-202ENST00000405271 CHIC1Q5VXU3 224 aa37.29■■■■□ 3.56
EPCAM-202ENST00000405271 TOP2BQ02880 1626 aa37.29■■■■□ 3.56
EPCAM-202ENST00000405271 DNMBPQ6XZF7 1577 aa37.26■■■■□ 3.56
EPCAM-202ENST00000405271 CUX1P39880 1505 aa37.26■■■■□ 3.55
EPCAM-202ENST00000405271 TOPBP1Q92547 1522 aa37.23■■■■□ 3.55
EPCAM-202ENST00000405271 TRIM41Q8WV44 630 aa37.08■■■■□ 3.53
EPCAM-202ENST00000405271 IFT140Q96RY7 1462 aa37.05■■■■□ 3.52
EPCAM-202ENST00000405271 FGD5Q6ZNL6 1462 aa36.95■■■■□ 3.51
EPCAM-202ENST00000405271 ZNF608Q9ULD9 1512 aaPredicted RBP36.95■■■■□ 3.51
EPCAM-202ENST00000405271 POLA1P09884 1462 aaPredicted RBP36.91■■■■□ 3.5
EPCAM-202ENST00000405271 WDR97A6NE52 1622 aa36.81■■■■□ 3.48
EPCAM-202ENST00000405271 SOGA1O94964 1423 aa36.8■■■■□ 3.48
EPCAM-202ENST00000405271 TARBP1Q13395 1621 aaKnown RBP36.8■■■■□ 3.48
EPCAM-202ENST00000405271 RAD54L2Q9Y4B4 1467 aa36.79■■■■□ 3.48
EPCAM-202ENST00000405271 AQRO60306 1485 aaKnown RBP eCLIP36.74■■■■□ 3.478e-7■■■□□ 16.1
EPCAM-202ENST00000405271 OSCARQ8IYS5 282 aa36.69■■■■□ 3.46
EPCAM-202ENST00000405271 EIF4G3O43432 1585 aaKnown RBP36.68■■■■□ 3.46
EPCAM-202ENST00000405271 TDRD9Q8NDG6 1382 aaKnown RBP36.66■■■■□ 3.46
EPCAM-202ENST00000405271 ABCA10Q8WWZ4 1543 aa36.66■■■■□ 3.46
EPCAM-202ENST00000405271 EEA1Q15075 1411 aa36.54■■■■□ 3.44
EPCAM-202ENST00000405271 ABCA5Q8WWZ7 1642 aa36.53■■■■□ 3.44
EPCAM-202ENST00000405271 KIF27Q86VH2 1401 aa36.48■■■■□ 3.43
EPCAM-202ENST00000405271 RUSC2Q8N2Y8 1516 aa36.45■■■■□ 3.42
EPCAM-202ENST00000405271 PBRM1Q86U86 1689 aa36.43■■■■□ 3.42
EPCAM-202ENST00000405271 FBLN2P98095 1184 aa36.39■■■■□ 3.42
EPCAM-202ENST00000405271 GRIN2BQ13224 1484 aa36.35■■■■□ 3.41
EPCAM-202ENST00000405271 GAPVD1Q14C86 1478 aa36.34■■■■□ 3.41
EPCAM-202ENST00000405271 SNAPC4Q5SXM2 1469 aa36.32■■■■□ 3.41
EPCAM-202ENST00000405271 ERICH3Q5RHP9 1530 aa36.28■■■■□ 3.4
EPCAM-202ENST00000405271 CUL7Q14999 1698 aa36.27■■■■□ 3.4
EPCAM-202ENST00000405271 MAGI1Q96QZ7 1491 aaPredicted RBP36.26■■■■□ 3.39
EPCAM-202ENST00000405271 CHMP7Q8WUX9 453 aaPredicted RBP36.24■■■■□ 3.39
EPCAM-202ENST00000405271 FAM9AQ8IZU1 332 aaPredicted RBP36.24■■■■□ 3.39
EPCAM-202ENST00000405271 CHD1O14646 1710 aa36.22■■■■□ 3.39
EPCAM-202ENST00000405271 KIF21BO75037 1637 aa36.2■■■■□ 3.39
EPCAM-202ENST00000405271 CSRNP3Q8WYN3 585 aa36.18■■■■□ 3.38
EPCAM-202ENST00000405271 SYNJ2O15056 1496 aa36.14■■■■□ 3.38
EPCAM-202ENST00000405271 IGF1RP08069 1367 aa36.12■■■■□ 3.37
EPCAM-202ENST00000405271 ADAMTS12P58397 1594 aa36.09■■■■□ 3.37
EPCAM-202ENST00000405271 PRXQ9BXM0 1461 aa36.06■■■■□ 3.36
EPCAM-202ENST00000405271 ARHGEF11O15085 1522 aa35.98■■■■□ 3.35
EPCAM-202ENST00000405271 RIMBP3CA6NJZ7 1639 aa35.97■■■■□ 3.35
EPCAM-202ENST00000405271 RIMBP3BA6NNM3 1639 aa35.97■■■■□ 3.35
EPCAM-202ENST00000405271 RIMBP3Q9UFD9 1639 aa35.97■■■■□ 3.35
EPCAM-202ENST00000405271 CARMIL1Q5VZK9 1371 aa35.96■■■■□ 3.35
EPCAM-202ENST00000405271 GOLGA3Q08378 1498 aa35.96■■■■□ 3.35
EPCAM-202ENST00000405271 RAPGEF2Q9Y4G8 1499 aa35.94■■■■□ 3.34
EPCAM-202ENST00000405271 FHAD1B1AJZ9 1412 aa35.93■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms