Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 RPL14AYKL006W 417 nt3.66□□□□□ -1.82
SSH1P38353 SEC72YLR292C 582 nt3.66□□□□□ -1.82
SSH1P38353 CWC25YNL245C 540 nt3.66□□□□□ -1.82
SSH1P38353 YPL278CYPL278C 303 nt3.66□□□□□ -1.82
SSH1P38353 HPR1YDR138W 2259 nt3.66□□□□□ -1.82
SSH1P38353 IDS2YJL146W 1410 nt3.66□□□□□ -1.82
SSH1P38353 ATG32YIL146C 1590 nt3.66□□□□□ -1.82
SSH1P38353 POL1YNL102W 4407 nt3.66□□□□□ -1.82
SSH1P38353 LYP1YNL268W 1836 nt3.65□□□□□ -1.82
SSH1P38353 PEP7YDR323C 1548 nt3.65□□□□□ -1.82
SSH1P38353 VMA1YDL185W 3216 nt3.65□□□□□ -1.82
SSH1P38353 ABP140YOR239W 1887 nt3.65□□□□□ -1.82
SSH1P38353 MAL13YGR288W 1422 nt3.65□□□□□ -1.83
SSH1P38353 PTA1YAL043C 2358 nt3.65□□□□□ -1.83
SSH1P38353 RPC53YDL150W 1269 nt3.65□□□□□ -1.83
SSH1P38353 GEP4YHR100C 558 nt3.65□□□□□ -1.83
SSH1P38353 YIL163CYIL163C 354 nt3.65□□□□□ -1.83
SSH1P38353 PRM9YAR031W 897 nt3.65□□□□□ -1.83
SSH1P38353 VPS69YPR087W 321 nt3.65□□□□□ -1.83
SSH1P38353 EFM2YBR271W 1260 nt3.65□□□□□ -1.83
SSH1P38353 GGA1YDR358W 1674 nt3.65□□□□□ -1.83
SSH1P38353 MMT1YMR177W 1533 nt3.65□□□□□ -1.83
SSH1P38353 SWP82YFL049W 1872 nt3.64□□□□□ -1.83
SSH1P38353 RAD57YDR004W 1383 nt3.64□□□□□ -1.83
SSH1P38353 KTR7YIL085C 1554 nt3.64□□□□□ -1.83
SSH1P38353 SUL2YLR092W 2682 nt3.64□□□□□ -1.83
SSH1P38353 PTC1YDL006W 846 nt3.64□□□□□ -1.83
SSH1P38353 PRE9YGR135W 777 nt3.64□□□□□ -1.83
SSH1P38353 EFB1YAL003W 621 nt3.64□□□□□ -1.83
SSH1P38353 YMR010WYMR010W 1218 nt3.64□□□□□ -1.83
SSH1P38353 AST1YBL069W 1290 nt3.64□□□□□ -1.83
SSH1P38353 RRP40YOL142W 723 nt3.64□□□□□ -1.83
SSH1P38353 TIF5YPR041W 1218 nt3.64□□□□□ -1.83
SSH1P38353 YPR059CYPR059C 387 nt3.64□□□□□ -1.83
SSH1P38353 DHR2YKL078W 2208 nt3.64□□□□□ -1.83
SSH1P38353 MSN4YKL062W 1893 nt3.64□□□□□ -1.83
SSH1P38353 TPA1YER049W 1935 nt3.64□□□□□ -1.83
SSH1P38353 POL12YBL035C 2118 nt3.64□□□□□ -1.83
SSH1P38353 MST1YKL194C 1389 nt3.63□□□□□ -1.83
SSH1P38353 YTM1YOR272W 1383 nt3.63□□□□□ -1.83
SSH1P38353 SRS2YJL092W 3525 nt3.63□□□□□ -1.83
SSH1P38353 SSH1YBR283C 1473 nt3.63□□□□□ -1.83
SSH1P38353 PHO13YDL236W 939 nt3.63□□□□□ -1.83
SSH1P38353 LSB1YGR136W 726 nt3.63□□□□□ -1.83
SSH1P38353 MRP4YHL004W 1185 nt3.63□□□□□ -1.83
SSH1P38353 SPO12YHR152W 522 nt3.63□□□□□ -1.83
SSH1P38353 SHE1YBL031W 1017 nt3.63□□□□□ -1.83
SSH1P38353 HEK2YBL032W 1146 nt3.63□□□□□ -1.83
SSH1P38353 YOR379CYOR379C 339 nt3.63□□□□□ -1.83
SSH1P38353 snR17asnR17a 333 nt3.63□□□□□ -1.83
SSH1P38353 snR37snR37 386 nt3.63□□□□□ -1.83
SSH1P38353 YBR219CYBR219C 384 nt3.63□□□□□ -1.83
SSH1P38353 CDC9YDL164C 2268 nt3.63□□□□□ -1.83
SSH1P38353 MUM3YOR298W 1440 nt3.62□□□□□ -1.83
SSH1P38353 NHX1YDR456W 1902 nt3.62□□□□□ -1.83
SSH1P38353 TMN2YDR107C 2019 nt3.62□□□□□ -1.83
SSH1P38353 YEL053W-AYEL053W-A 348 nt3.62□□□□□ -1.83
SSH1P38353 YER067C-AYER067C-A 324 nt3.62□□□□□ -1.83
SSH1P38353 YER085CYER085C 522 nt3.62□□□□□ -1.83
SSH1P38353 ACP1YKL192C 378 nt3.62□□□□□ -1.83
SSH1P38353 RPP0YLR340W 939 nt3.62□□□□□ -1.83
SSH1P38353 YLR364C-AYLR364C-A 123 nt3.62□□□□□ -1.83
SSH1P38353 MRPS9YBR146W 837 nt3.62□□□□□ -1.83
SSH1P38353 VPS36YLR417W 1701 nt3.61□□□□□ -1.83
SSH1P38353 STV1YMR054W 2673 nt3.61□□□□□ -1.83
SSH1P38353 YCR075W-AYCR075W-A 228 nt3.61□□□□□ -1.83
SSH1P38353 SLX8YER116C 825 nt3.61□□□□□ -1.83
SSH1P38353 NSE1YLR007W 1011 nt3.61□□□□□ -1.83
SSH1P38353 SIW14YNL032W 846 nt3.61□□□□□ -1.83
SSH1P38353 NCE103YNL036W 666 nt3.61□□□□□ -1.83
SSH1P38353 NAT3YPR131C 588 nt3.61□□□□□ -1.83
SSH1P38353 YPR150WYPR150W 522 nt3.61□□□□□ -1.83
SSH1P38353 PCL10YGL134W 1302 nt3.61□□□□□ -1.83
SSH1P38353 TRM11YOL124C 1302 nt3.61□□□□□ -1.83
SSH1P38353 ATG2YNL242W 4779 nt3.61□□□□□ -1.83
SSH1P38353 FLO10YKR102W 3510 nt3.61□□□□□ -1.83
SSH1P38353 YHR112CYHR112C 1137 nt3.6□□□□□ -1.83
SSH1P38353 AIM22YJL046W 1230 nt3.6□□□□□ -1.83
SSH1P38353 YJR112W-AYJR112W-A 330 nt3.6□□□□□ -1.83
SSH1P38353 RRN9YMR270C 1098 nt3.6□□□□□ -1.83
SSH1P38353 RPS19AYOL121C 435 nt3.6□□□□□ -1.83
SSH1P38353 ISA2YPR067W 558 nt3.6□□□□□ -1.83
SSH1P38353 PWR1PWR1 941 nt3.6□□□□□ -1.83
SSH1P38353 RER1YCL001W 567 nt3.6□□□□□ -1.83
SSH1P38353 DEG1YFL001W 1329 nt3.6□□□□□ -1.83
SSH1P38353 OCT1YKL134C 2319 nt3.6□□□□□ -1.83
SSH1P38353 ADY3YDL239C 2373 nt3.6□□□□□ -1.83
SSH1P38353 EMC1YCL045C 2283 nt3.59□□□□□ -1.83
SSH1P38353 APL4YPR029C 2499 nt3.59□□□□□ -1.83
SSH1P38353 ELO2YCR034W 1044 nt3.59□□□□□ -1.83
SSH1P38353 RXT3YDL076C 885 nt3.59□□□□□ -1.83
SSH1P38353 NBP2YDR162C 711 nt3.59□□□□□ -1.83
SSH1P38353 SPC34YKR037C 888 nt3.59□□□□□ -1.83
SSH1P38353 YAR023CYAR023C 540 nt3.59□□□□□ -1.83
SSH1P38353 YNL143CYNL143C 393 nt3.59□□□□□ -1.83
SSH1P38353 ZRC1YMR243C 1329 nt3.59□□□□□ -1.83
SSH1P38353 ERB1YMR049C 2424 nt3.58□□□□□ -1.84
SSH1P38353 DAS2YDR020C 699 nt3.58□□□□□ -1.84
SSH1P38353 SPC19YDR201W 498 nt3.58□□□□□ -1.84
SSH1P38353 SCD6YPR129W 1050 nt3.58□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 47.4 ms