RNA–Protein interactions for RNA: YDR201W

SPC19, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeastyeast

Gene SPC19, Length 498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC19YDR201W MTC1P47018 478 aaKnown RBP10.44□□□□□ -0.74
SPC19YDR201W FAP1P53971 965 aa10.08□□□□□ -0.8
SPC19YDR201W PRY3P47033 881 aa9.49□□□□□ -0.89
SPC19YDR201W AAD16Q02895 342 aa9.18□□□□□ -0.94
SPC19YDR201W PRI1P10363 409 aa9.15□□□□□ -0.94
SPC19YDR201W DRS1P32892 752 aaKnown RBP9.12□□□□□ -0.95
SPC19YDR201W HAA1Q12753 694 aaKnown RBP8.92□□□□□ -0.98
SPC19YDR201W YCK3P39962 524 aa8.89□□□□□ -0.99
SPC19YDR201W ISW2Q08773 1120 aa8.82□□□□□ -1
SPC19YDR201W RPG1P38249 964 aaKnown RBP8.7□□□□□ -1.02
SPC19YDR201W TSR3Q12094 313 aaKnown RBP8.58□□□□□ -1.04
SPC19YDR201W MRPL32P25348 183 aa8.3□□□□□ -1.08
SPC19YDR201W DIP2Q12220 943 aaPredicted RBP8.23□□□□□ -1.09
SPC19YDR201W RSE1Q04693 1361 aaKnown RBP8.14□□□□□ -1.11
SPC19YDR201W YGL015CP33199 130 aa8.14□□□□□ -1.11
SPC19YDR201W REB1P21538 810 aa7.94□□□□□ -1.14
SPC19YDR201W RPL17AP05740 184 aaKnown RBP7.9□□□□□ -1.14
SPC19YDR201W RPL17BP46990 184 aaKnown RBP7.9□□□□□ -1.14
SPC19YDR201W AVT3P36062 692 aa7.76□□□□□ -1.17
SPC19YDR201W BUD31P25337 157 aaPredicted RBP7.72□□□□□ -1.17
SPC19YDR201W CDC27P38042 758 aa7.72□□□□□ -1.17
SPC19YDR201W UBP10P53874 792 aaPredicted RBP7.65□□□□□ -1.18
SPC19YDR201W YKR023WP36119 530 aaKnown RBP7.56□□□□□ -1.2
SPC19YDR201W MAP2P38174 421 aaKnown RBP7.56□□□□□ -1.2
SPC19YDR201W SPT21P35209 758 aa7.51□□□□□ -1.21
SPC19YDR201W TFC8Q12308 588 aa7.43□□□□□ -1.22
SPC19YDR201W HOP09932 586 aa7.4□□□□□ -1.22
SPC19YDR201W DCD1P06773 312 aa7.36□□□□□ -1.23
SPC19YDR201W TIF4632P39936 914 aaKnown RBP7.36□□□□□ -1.23
SPC19YDR201W TGL3P40308 642 aa7.33□□□□□ -1.24
SPC19YDR201W UBP9P39967 754 aa7.31□□□□□ -1.24
SPC19YDR201W SCY1P53009 804 aa7.31□□□□□ -1.24
SPC19YDR201W BFR2Q06631 534 aaKnown RBP7.3□□□□□ -1.24
SPC19YDR201W SIS1P25294 352 aaKnown RBP7.29□□□□□ -1.24
SPC19YDR201W SLX5P32828 619 aaKnown RBP7.28□□□□□ -1.24
SPC19YDR201W SGS1P35187 1447 aa7.26□□□□□ -1.25
SPC19YDR201W INO80P53115 1489 aa7.17□□□□□ -1.26
SPC19YDR201W BCH2P36122 765 aa7.16□□□□□ -1.26
SPC19YDR201W RIM101P33400 625 aa7.13□□□□□ -1.27
SPC19YDR201W TCB3Q03640 1545 aaKnown RBP7.08□□□□□ -1.28
SPC19YDR201W TY1B-DR4Q07793 1604 aa7.04□□□□□ -1.28
SPC19YDR201W MON2P48563 1636 aaPredicted RBP7.03□□□□□ -1.28
SPC19YDR201W SPA2P23201 1466 aaKnown RBP6.98□□□□□ -1.29
SPC19YDR201W MST1P07236 462 aa6.95□□□□□ -1.3
SPC19YDR201W SSN2P38931 1420 aa6.93□□□□□ -1.3
SPC19YDR201W EPS1P40557 701 aa6.93□□□□□ -1.3
SPC19YDR201W BDF1P35817 686 aa6.92□□□□□ -1.3
SPC19YDR201W YOR238WQ08634 303 aa6.89□□□□□ -1.31
SPC19YDR201W YBL029C-AQ3E756 94 aa6.89□□□□□ -1.31
SPC19YDR201W HSL1P34244 1518 aa6.89□□□□□ -1.31
SPC19YDR201W SWR1Q05471 1514 aa6.86□□□□□ -1.31
SPC19YDR201W SPT6P23615 1451 aaKnown RBP6.85□□□□□ -1.31
SPC19YDR201W NSR1P27476 414 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31 RIP-Chip
SPC19YDR201W OXP1P28273 1286 aa6.84□□□□□ -1.31
SPC19YDR201W VNX1P42839 908 aa6.81□□□□□ -1.32
SPC19YDR201W YIL055CP40523 627 aaKnown RBP6.8□□□□□ -1.32
SPC19YDR201W PTP3P40048 928 aa6.79□□□□□ -1.32
SPC19YDR201W YAP5P40574 245 aa6.76□□□□□ -1.33
SPC19YDR201W SPP1Q03012 353 aa6.76□□□□□ -1.33
SPC19YDR201W HIR3P47171 1648 aa6.76□□□□□ -1.33
SPC19YDR201W BBC1P47068 1157 aa6.75□□□□□ -1.33
SPC19YDR201W WSC3Q12215 556 aa6.69□□□□□ -1.34
SPC19YDR201W XRN1P22147 1528 aaKnown RBP6.69□□□□□ -1.34
SPC19YDR201W RSM7P47150 247 aa6.68□□□□□ -1.34
SPC19YDR201W AI2P03876 854 aa6.67□□□□□ -1.34
SPC19YDR201W YJL171CP46992 396 aa6.67□□□□□ -1.34
SPC19YDR201W KOG1P38873 1557 aa6.66□□□□□ -1.34
SPC19YDR201W AIR2Q12476 344 aaKnown RBP6.66□□□□□ -1.34
SPC19YDR201W DNA2P38859 1522 aa6.66□□□□□ -1.34
SPC19YDR201W TIF11P38912 153 aaKnown RBP6.65□□□□□ -1.34
SPC19YDR201W FKH1P40466 484 aa6.64□□□□□ -1.35
SPC19YDR201W REV3P14284 1504 aa6.63□□□□□ -1.35
SPC19YDR201W GTT3P39996 337 aa6.62□□□□□ -1.35
SPC19YDR201W THO2P53552 1597 aaKnown RBP6.6□□□□□ -1.35
SPC19YDR201W SIN3P22579 1536 aa6.59□□□□□ -1.35
SPC19YDR201W YAH1Q12184 172 aaKnown RBP6.55□□□□□ -1.36
SPC19YDR201W SSK2P53599 1579 aa6.55□□□□□ -1.36
SPC19YDR201W LDB19Q12502 818 aa6.54□□□□□ -1.36
SPC19YDR201W ULI1P43604 169 aa6.53□□□□□ -1.36
SPC19YDR201W BMT6Q12291 365 aa6.52□□□□□ -1.37
SPC19YDR201W BUD4P47136 1447 aa6.51□□□□□ -1.37
SPC19YDR201W ESP1Q03018 1630 aa6.51□□□□□ -1.37
SPC19YDR201W IOC2Q12072 812 aa6.51□□□□□ -1.37
SPC19YDR201W TAF2P23255 1407 aa6.5□□□□□ -1.37
SPC19YDR201W MYO2P19524 1574 aaKnown RBP6.48□□□□□ -1.37
SPC19YDR201W ATG2P53855 1592 aa6.48□□□□□ -1.37
SPC19YDR201W MSB4Q12317 492 aa6.47□□□□□ -1.37
SPC19YDR201W EAP1P36041 632 aaKnown RBP6.46□□□□□ -1.38
SPC19YDR201W ECM5Q03214 1411 aa6.46□□□□□ -1.38
SPC19YDR201W YLR271WQ06152 274 aa6.44□□□□□ -1.38
SPC19YDR201W PIB1Q06651 286 aa6.44□□□□□ -1.38
SPC19YDR201W MDS3P53094 1487 aa6.43□□□□□ -1.38
SPC19YDR201W PSD2P53037 1138 aaKnown RBP6.43□□□□□ -1.38
SPC19YDR201W PEP1P32319 1579 aa6.4□□□□□ -1.38
SPC19YDR201W SKI3P17883 1432 aaKnown RBP6.4□□□□□ -1.39
SPC19YDR201W MRM1P25270 412 aa6.38□□□□□ -1.39
SPC19YDR201W RTG1P32607 177 aa6.38□□□□□ -1.39
SPC19YDR201W YPK9Q12697 1472 aa6.37□□□□□ -1.39
SPC19YDR201W NCR1Q12200 1170 aa6.37□□□□□ -1.39
SPC19YDR201W YOL036WQ08206 761 aa6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms