RNA–Protein interactions for RNA: YKR037C

SPC34, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeastyeast

Gene SPC34, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC34YKR037C DRS1P32892 752 aaKnown RBP14.29□□□□□ -0.12
SPC34YKR037C MTC1P47018 478 aaKnown RBP13.64□□□□□ -0.23
SPC34YKR037C BFR2Q06631 534 aaKnown RBP12.59□□□□□ -0.39
SPC34YKR037C TFA1P36100 482 aa12.17□□□□□ -0.46
SPC34YKR037C DIP2Q12220 943 aaPredicted RBP11.96□□□□□ -0.49
SPC34YKR037C AVT3P36062 692 aa11.92□□□□□ -0.5
SPC34YKR037C FAP1P53971 965 aa11.83□□□□□ -0.52
SPC34YKR037C INO80P53115 1489 aa11.24□□□□□ -0.61
SPC34YKR037C MON2P48563 1636 aaPredicted RBP11.23□□□□□ -0.61
SPC34YKR037C PRY3P47033 881 aa11.16□□□□□ -0.62
SPC34YKR037C RSE1Q04693 1361 aaKnown RBP11.15□□□□□ -0.63
SPC34YKR037C ISW2Q08773 1120 aa11□□□□□ -0.65
SPC34YKR037C RQC2Q12532 1038 aaKnown RBP10.91□□□□□ -0.66
SPC34YKR037C RPG1P38249 964 aaKnown RBP10.85□□□□□ -0.67
SPC34YKR037C AAD16Q02895 342 aa10.74□□□□□ -0.69
SPC34YKR037C RPL17AP05740 184 aaKnown RBP10.72□□□□□ -0.69
SPC34YKR037C PRI1P10363 409 aa10.72□□□□□ -0.69
SPC34YKR037C RPL17BP46990 184 aaKnown RBP10.72□□□□□ -0.69
SPC34YKR037C DNA2P38859 1522 aa10.67□□□□□ -0.7
SPC34YKR037C REB1P21538 810 aa10.54□□□□□ -0.72
SPC34YKR037C YCK3P39962 524 aa10.54□□□□□ -0.72
SPC34YKR037C HAA1Q12753 694 aaKnown RBP10.49□□□□□ -0.73
SPC34YKR037C KOG1P38873 1557 aa10.43□□□□□ -0.74
SPC34YKR037C PTP3P40048 928 aa10.34□□□□□ -0.75
SPC34YKR037C SWR1Q05471 1514 aa10.3□□□□□ -0.76
SPC34YKR037C SPT21P35209 758 aa10.3□□□□□ -0.76
SPC34YKR037C RIM101P33400 625 aa10.29□□□□□ -0.76
SPC34YKR037C DMA1P38823 416 aa10.28□□□□□ -0.76
SPC34YKR037C TSR3Q12094 313 aaKnown RBP10.19□□□□□ -0.78
SPC34YKR037C SPA2P23201 1466 aaKnown RBP10.16□□□□□ -0.78
SPC34YKR037C SSP1P38871 571 aa10.1□□□□□ -0.79
SPC34YKR037C OXP1P28273 1286 aa10.01□□□□□ -0.81
SPC34YKR037C YAH1Q12184 172 aaKnown RBP9.98□□□□□ -0.81
SPC34YKR037C YIL055CP40523 627 aaKnown RBP9.91□□□□□ -0.82
SPC34YKR037C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.89□□□□□ -0.83not detected
SPC34YKR037C YKR023WP36119 530 aaKnown RBP9.86□□□□□ -0.83
SPC34YKR037C YLR271WQ06152 274 aa9.82□□□□□ -0.84
SPC34YKR037C TY1B-DR4Q07793 1604 aa9.82□□□□□ -0.84
SPC34YKR037C MRPL32P25348 183 aa9.78□□□□□ -0.84
SPC34YKR037C MIF2P35201 549 aa9.77□□□□□ -0.85
SPC34YKR037C TCB3Q03640 1545 aaKnown RBP9.75□□□□□ -0.85
SPC34YKR037C RSM7P47150 247 aa9.72□□□□□ -0.85
SPC34YKR037C HOP09932 586 aa9.71□□□□□ -0.86
SPC34YKR037C MGA2P40578 1113 aa9.67□□□□□ -0.86
SPC34YKR037C TFC8Q12308 588 aa9.67□□□□□ -0.86
SPC34YKR037C DCD1P06773 312 aa9.62□□□□□ -0.87
SPC34YKR037C TAF7Q05021 590 aa9.62□□□□□ -0.87
SPC34YKR037C LEO1P38439 464 aa9.58□□□□□ -0.88
SPC34YKR037C CST9Q06032 482 aa9.56□□□□□ -0.88
SPC34YKR037C YGL015CP33199 130 aa9.54□□□□□ -0.88
SPC34YKR037C CDC27P38042 758 aa9.54□□□□□ -0.88
SPC34YKR037C AI2P03876 854 aa9.51□□□□□ -0.89
SPC34YKR037C ECM5Q03214 1411 aa9.49□□□□□ -0.89
SPC34YKR037C SAS10Q12136 610 aaPredicted RBP9.49□□□□□ -0.89
SPC34YKR037C PSD2P53037 1138 aaKnown RBP9.47□□□□□ -0.89
SPC34YKR037C BCH2P36122 765 aa9.42□□□□□ -0.9
SPC34YKR037C BBC1P47068 1157 aa9.42□□□□□ -0.9
SPC34YKR037C REV3P14284 1504 aa9.38□□□□□ -0.91
SPC34YKR037C LEU3P08638 886 aa9.37□□□□□ -0.91
SPC34YKR037C YFR006WP43590 535 aa9.37□□□□□ -0.91
SPC34YKR037C BUD4P47136 1447 aa9.31□□□□□ -0.92
SPC34YKR037C SPT6P23615 1451 aaKnown RBP9.3□□□□□ -0.92
SPC34YKR037C MDS3P53094 1487 aa9.3□□□□□ -0.92
SPC34YKR037C EPS1P40557 701 aa9.3□□□□□ -0.92
SPC34YKR037C THO2P53552 1597 aaKnown RBP9.29□□□□□ -0.92
SPC34YKR037C HSL1P34244 1518 aa9.28□□□□□ -0.92
SPC34YKR037C RAM2P29703 316 aa9.27□□□□□ -0.93
SPC34YKR037C MRM1P25270 412 aa9.26□□□□□ -0.93
SPC34YKR037C BDF1P35817 686 aa9.21□□□□□ -0.94
SPC34YKR037C SET1P38827 1080 aaKnown RBP9.21□□□□□ -0.94
SPC34YKR037C RCR1P38212 213 aa9.18□□□□□ -0.94
SPC34YKR037C SCY1P53009 804 aa9.17□□□□□ -0.94
SPC34YKR037C BUD31P25337 157 aaPredicted RBP9.16□□□□□ -0.94
SPC34YKR037C RTG3P38165 486 aa9.15□□□□□ -0.94
SPC34YKR037C BPT1P14772 1559 aa9.13□□□□□ -0.95
SPC34YKR037C SPB4P25808 606 aaPredicted RBP9.13□□□□□ -0.95
SPC34YKR037C VPS70P47161 811 aa9.13□□□□□ -0.95
SPC34YKR037C RPN1P38764 993 aaKnown RBP9.12□□□□□ -0.95
SPC34YKR037C CKB1P43639 278 aa9.1□□□□□ -0.95
SPC34YKR037C PEP1P32319 1579 aa9.09□□□□□ -0.95
SPC34YKR037C YPR148CQ06523 435 aa9.08□□□□□ -0.96
SPC34YKR037C MAP2P38174 421 aaKnown RBP9.07□□□□□ -0.96
SPC34YKR037C IFH1P39520 1085 aa9.07□□□□□ -0.96
SPC34YKR037C MAK11P20484 414 aaKnown RBP9.06□□□□□ -0.96
SPC34YKR037C UBP10P53874 792 aaPredicted RBP9.04□□□□□ -0.96
SPC34YKR037C HIR3P47171 1648 aa9.02□□□□□ -0.96
SPC34YKR037C ABP1P15891 592 aaKnown RBP9.01□□□□□ -0.97
SPC34YKR037C VPS29P38759 282 aa8.99□□□□□ -0.97
SPC34YKR037C DMA2P53924 522 aa8.98□□□□□ -0.97
SPC34YKR037C SGS1P35187 1447 aa8.97□□□□□ -0.97
SPC34YKR037C YCF1P39109 1515 aaKnown RBP8.96□□□□□ -0.97
SPC34YKR037C SLX5P32828 619 aaKnown RBP8.96□□□□□ -0.98
SPC34YKR037C COQ8P27697 501 aa8.95□□□□□ -0.98
SPC34YKR037C PBS2P08018 668 aa8.92□□□□□ -0.98
SPC34YKR037C YMR1P47147 688 aaKnown RBP RIP-Chip data8.9□□□□□ -0.98not detected
SPC34YKR037C TAF2P23255 1407 aa8.89□□□□□ -0.99
SPC34YKR037C DSF2P38213 736 aa8.89□□□□□ -0.99
SPC34YKR037C MYO2P19524 1574 aaKnown RBP8.89□□□□□ -0.99
SPC34YKR037C BNI1P41832 1953 aa8.88□□□□□ -0.99
SPC34YKR037C LTE1P07866 1435 aa8.88□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms