RNA–Protein interactions for RNA: snR17a

snR17a, Transcript of Small nucleolar RNA (snoRNA) U3, yeastyeast

Gene snR17a, Length 333 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR17asnR17a MTC1P47018 478 aaKnown RBP12.23□□□□□ -0.45
snR17asnR17a DRS1P32892 752 aaKnown RBP11.63□□□□□ -0.55
snR17asnR17a FAP1P53971 965 aa10.81□□□□□ -0.68
snR17asnR17a PRI1P10363 409 aa10.19□□□□□ -0.78
snR17asnR17a ISW2Q08773 1120 aa10.15□□□□□ -0.78
snR17asnR17a AAD16Q02895 342 aa10.13□□□□□ -0.79
snR17asnR17a DIP2Q12220 943 aaPredicted RBP10.13□□□□□ -0.79
snR17asnR17a PRY3P47033 881 aa10.12□□□□□ -0.79
snR17asnR17a RPG1P38249 964 aaKnown RBP9.99□□□□□ -0.81
snR17asnR17a AVT3P36062 692 aa9.79□□□□□ -0.84
snR17asnR17a BFR2Q06631 534 aaKnown RBP9.78□□□□□ -0.84
snR17asnR17a RSE1Q04693 1361 aaKnown RBP9.76□□□□□ -0.85
snR17asnR17a TSR3Q12094 313 aaKnown RBP9.62□□□□□ -0.87
snR17asnR17a HAA1Q12753 694 aaKnown RBP9.55□□□□□ -0.88
snR17asnR17a YCK3P39962 524 aa9.45□□□□□ -0.9
snR17asnR17a RPL17AP05740 184 aaKnown RBP9.41□□□□□ -0.9
snR17asnR17a RPL17BP46990 184 aaKnown RBP9.41□□□□□ -0.9
snR17asnR17a REB1P21538 810 aa9.39□□□□□ -0.91
snR17asnR17a MRPL32P25348 183 aa9.32□□□□□ -0.92
snR17asnR17a SPT21P35209 758 aa8.97□□□□□ -0.97
snR17asnR17a YGL015CP33199 130 aa8.9□□□□□ -0.98
snR17asnR17a YKR023WP36119 530 aaKnown RBP8.83□□□□□ -1
snR17asnR17a CDC27P38042 758 aa8.8□□□□□ -1
snR17asnR17a TFA1P36100 482 aa8.75□□□□□ -1.01
snR17asnR17a RIM101P33400 625 aa8.74□□□□□ -1.01
snR17asnR17a TFC8Q12308 588 aa8.68□□□□□ -1.02
snR17asnR17a HOP09932 586 aa8.66□□□□□ -1.02
snR17asnR17a UBP10P53874 792 aaPredicted RBP8.6□□□□□ -1.03
snR17asnR17a DCD1P06773 312 aa8.58□□□□□ -1.04
snR17asnR17a MAP2P38174 421 aaKnown RBP8.52□□□□□ -1.05
snR17asnR17a OXP1P28273 1286 aa8.42□□□□□ -1.06
snR17asnR17a SCY1P53009 804 aa8.41□□□□□ -1.06
snR17asnR17a YIL055CP40523 627 aaKnown RBP8.4□□□□□ -1.06
snR17asnR17a BCH2P36122 765 aa8.39□□□□□ -1.07
snR17asnR17a PTP3P40048 928 aa8.35□□□□□ -1.07
snR17asnR17a SLX5P32828 619 aaKnown RBP8.32□□□□□ -1.08
snR17asnR17a TIF4632P39936 914 aaKnown RBP8.29□□□□□ -1.08
snR17asnR17a RSM7P47150 247 aa8.23□□□□□ -1.09
snR17asnR17a YAH1Q12184 172 aaKnown RBP8.23□□□□□ -1.09
snR17asnR17a TGL3P40308 642 aa8.22□□□□□ -1.09
snR17asnR17a EPS1P40557 701 aa8.21□□□□□ -1.1
snR17asnR17a BBC1P47068 1157 aa8.18□□□□□ -1.1
snR17asnR17a BDF1P35817 686 aa8.17□□□□□ -1.1
snR17asnR17a AI2P03876 854 aa8.12□□□□□ -1.11
snR17asnR17a SSP1P38871 571 aa8.08□□□□□ -1.12
snR17asnR17a YLR271WQ06152 274 aa8.08□□□□□ -1.12
snR17asnR17a ARP8Q12386 881 aaKnown RBP RIP-Chip data8.07□□□□□ -1.12not detected
snR17asnR17a BUD31P25337 157 aaPredicted RBP8.01□□□□□ -1.13
snR17asnR17a UBP9P39967 754 aa7.95□□□□□ -1.14
snR17asnR17a PSD2P53037 1138 aaKnown RBP7.95□□□□□ -1.14
snR17asnR17a NSR1P27476 414 aaKnown RBP RIP-Chip data7.91□□□□□ -1.14not detected
snR17asnR17a YOR238WQ08634 303 aa7.9□□□□□ -1.14
snR17asnR17a MST1P07236 462 aa7.87□□□□□ -1.15
snR17asnR17a YAP5P40574 245 aa7.87□□□□□ -1.15
snR17asnR17a MGA2P40578 1113 aa7.87□□□□□ -1.15
snR17asnR17a MRM1P25270 412 aa7.84□□□□□ -1.15
snR17asnR17a CST9Q06032 482 aa7.79□□□□□ -1.16
snR17asnR17a RTG3P38165 486 aa7.72□□□□□ -1.17
snR17asnR17a GTT3P39996 337 aa7.71□□□□□ -1.18
snR17asnR17a SIS1P25294 352 aaKnown RBP7.7□□□□□ -1.18
snR17asnR17a YBL029C-AQ3E756 94 aa7.69□□□□□ -1.18
snR17asnR17a YMR1P47147 688 aaKnown RBP RIP-Chip data7.67□□□□□ -1.18not detected
snR17asnR17a VPS29P38759 282 aa7.64□□□□□ -1.19
snR17asnR17a VNX1P42839 908 aa7.64□□□□□ -1.19
snR17asnR17a PIB1Q06651 286 aa7.64□□□□□ -1.19
snR17asnR17a WSC3Q12215 556 aa7.63□□□□□ -1.19
snR17asnR17a DBP1P24784 617 aaKnown RBP7.61□□□□□ -1.19
snR17asnR17a SPP1Q03012 353 aa7.61□□□□□ -1.19
snR17asnR17a RCR1P38212 213 aa7.57□□□□□ -1.2
snR17asnR17a YFR006WP43590 535 aa7.56□□□□□ -1.2
snR17asnR17a TIF11P38912 153 aaKnown RBP7.55□□□□□ -1.2
snR17asnR17a STS1P38637 319 aa7.54□□□□□ -1.2
snR17asnR17a MSB4Q12317 492 aa7.53□□□□□ -1.2
snR17asnR17a VMA1P17255 1071 aaKnown RBP7.51□□□□□ -1.21
snR17asnR17a EAP1P36041 632 aaKnown RBP7.5□□□□□ -1.21
snR17asnR17a ULI1P43604 169 aa7.48□□□□□ -1.21
snR17asnR17a YOL036WQ08206 761 aa7.47□□□□□ -1.21
snR17asnR17a SAM3Q08986 587 aa7.46□□□□□ -1.22
snR17asnR17a SET4P42948 560 aa7.45□□□□□ -1.22
snR17asnR17a MAK11P20484 414 aaKnown RBP7.43□□□□□ -1.22
snR17asnR17a RAM2P29703 316 aa7.43□□□□□ -1.22
snR17asnR17a ABP1P15891 592 aaKnown RBP7.41□□□□□ -1.22
snR17asnR17a IOC2Q12072 812 aa7.41□□□□□ -1.22
snR17asnR17a LDB19Q12502 818 aa7.41□□□□□ -1.22
snR17asnR17a GYP5Q12344 894 aa7.39□□□□□ -1.23
snR17asnR17a TRP5P00931 707 aaKnown RBP7.38□□□□□ -1.23
snR17asnR17a MIF2P35201 549 aa7.37□□□□□ -1.23
snR17asnR17a FKH1P40466 484 aa7.37□□□□□ -1.23
snR17asnR17a YJL171CP46992 396 aa7.36□□□□□ -1.23
snR17asnR17a AIR2Q12476 344 aaKnown RBP7.35□□□□□ -1.23
snR17asnR17a YNL035CP53962 389 aaKnown RBP7.33□□□□□ -1.24
snR17asnR17a HTA1P04911 132 aaKnown RBP7.32□□□□□ -1.24
snR17asnR17a HTA2P04912 132 aa7.32□□□□□ -1.24
snR17asnR17a RTG1P32607 177 aa7.32□□□□□ -1.24
snR17asnR17a GRE2Q12068 342 aaKnown RBP7.32□□□□□ -1.24
snR17asnR17a COQ8P27697 501 aa7.31□□□□□ -1.24
snR17asnR17a SEC61P32915 480 aa7.3□□□□□ -1.24
snR17asnR17a DCW1P36091 449 aa7.3□□□□□ -1.24
snR17asnR17a JIP4Q03361 876 aa7.3□□□□□ -1.24
snR17asnR17a PTC3P34221 468 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms