RNA–Protein interactions for RNA: YBR283C

SSH1, Transcript of Subunit of the Ssh1 translocon complex, yeastyeast

Gene SSH1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSH1YBR283C FAP1P53971 965 aa9.49□□□□□ -0.89
SSH1YBR283C PRY3P47033 881 aa9□□□□□ -0.97
SSH1YBR283C DRS1P32892 752 aaKnown RBP8.45□□□□□ -1.06
SSH1YBR283C YCK3P39962 524 aa8.45□□□□□ -1.06
SSH1YBR283C HAA1Q12753 694 aaKnown RBP8.28□□□□□ -1.08
SSH1YBR283C MTC1P47018 478 aaKnown RBP8.25□□□□□ -1.09
SSH1YBR283C AAD16Q02895 342 aa8.08□□□□□ -1.12
SSH1YBR283C PRI1P10363 409 aa7.89□□□□□ -1.15
SSH1YBR283C BUD31P25337 157 aaPredicted RBP7.57□□□□□ -1.2
SSH1YBR283C INO80P53115 1489 aa7.43□□□□□ -1.22
SSH1YBR283C BFR2Q06631 534 aaKnown RBP7.43□□□□□ -1.22
SSH1YBR283C MON2P48563 1636 aaPredicted RBP7.41□□□□□ -1.22
SSH1YBR283C TSR3Q12094 313 aaKnown RBP7.39□□□□□ -1.23
SSH1YBR283C YGL015CP33199 130 aa7.3□□□□□ -1.24
SSH1YBR283C SGS1P35187 1447 aa7.28□□□□□ -1.24
SSH1YBR283C TCB3Q03640 1545 aaKnown RBP7.2□□□□□ -1.26
SSH1YBR283C TY1B-DR4Q07793 1604 aa7.18□□□□□ -1.26
SSH1YBR283C SWR1Q05471 1514 aa7.17□□□□□ -1.26
SSH1YBR283C TFA1P36100 482 aa7.15□□□□□ -1.27
SSH1YBR283C DIP2Q12220 943 aaPredicted RBP7.12□□□□□ -1.27
SSH1YBR283C RPG1P38249 964 aaKnown RBP7.11□□□□□ -1.27
SSH1YBR283C DNA2P38859 1522 aa7.1□□□□□ -1.27
SSH1YBR283C ISW2Q08773 1120 aa7.09□□□□□ -1.27
SSH1YBR283C AVT3P36062 692 aa7.07□□□□□ -1.28
SSH1YBR283C MRPL32P25348 183 aa7.06□□□□□ -1.28
SSH1YBR283C SIS1P25294 352 aaKnown RBP7.03□□□□□ -1.28
SSH1YBR283C HSL1P34244 1518 aa6.99□□□□□ -1.29
SSH1YBR283C KOG1P38873 1557 aa6.98□□□□□ -1.29
SSH1YBR283C SPT6P23615 1451 aaKnown RBP6.97□□□□□ -1.29
SSH1YBR283C SPA2P23201 1466 aaKnown RBP6.93□□□□□ -1.3
SSH1YBR283C HIR3P47171 1648 aa6.85□□□□□ -1.31
SSH1YBR283C SSN2P38931 1420 aa6.81□□□□□ -1.32
SSH1YBR283C XRN1P22147 1528 aaKnown RBP6.77□□□□□ -1.33
SSH1YBR283C ECM5Q03214 1411 aa6.76□□□□□ -1.33
SSH1YBR283C RSE1Q04693 1361 aaKnown RBP6.72□□□□□ -1.33
SSH1YBR283C BUD4P47136 1447 aa6.7□□□□□ -1.34
SSH1YBR283C THO2P53552 1597 aaKnown RBP6.68□□□□□ -1.34
SSH1YBR283C REV3P14284 1504 aa6.64□□□□□ -1.35
SSH1YBR283C TAF2P23255 1407 aa6.64□□□□□ -1.35
SSH1YBR283C MDS3P53094 1487 aa6.63□□□□□ -1.35
SSH1YBR283C ATG2P53855 1592 aa6.58□□□□□ -1.36
SSH1YBR283C PEP1P32319 1579 aa6.58□□□□□ -1.36
SSH1YBR283C UBP9P39967 754 aa6.56□□□□□ -1.36
SSH1YBR283C SKI3P17883 1432 aaKnown RBP6.55□□□□□ -1.36
SSH1YBR283C SIN3P22579 1536 aa6.53□□□□□ -1.36
SSH1YBR283C SSK2P53599 1579 aa6.51□□□□□ -1.37
SSH1YBR283C ESP1Q03018 1630 aa6.48□□□□□ -1.37
SSH1YBR283C RQC2Q12532 1038 aaKnown RBP6.47□□□□□ -1.37
SSH1YBR283C BPT1P14772 1559 aa6.44□□□□□ -1.38
SSH1YBR283C MAP2P38174 421 aaKnown RBP6.42□□□□□ -1.38
SSH1YBR283C UBP10P53874 792 aaPredicted RBP6.41□□□□□ -1.38
SSH1YBR283C CDC27P38042 758 aa6.41□□□□□ -1.38
SSH1YBR283C UFD4P33202 1483 aa6.4□□□□□ -1.39
SSH1YBR283C RPL17AP05740 184 aaKnown RBP6.39□□□□□ -1.39
SSH1YBR283C RPL17BP46990 184 aaKnown RBP6.39□□□□□ -1.39
SSH1YBR283C MYO2P19524 1574 aaKnown RBP6.38□□□□□ -1.39
SSH1YBR283C SCC2Q04002 1493 aa6.37□□□□□ -1.39
SSH1YBR283C YPK9Q12697 1472 aa6.37□□□□□ -1.39
SSH1YBR283C REB1P21538 810 aa6.33□□□□□ -1.4
SSH1YBR283C YCF1P39109 1515 aaKnown RBP6.32□□□□□ -1.4
SSH1YBR283C RPO31P04051 1460 aa6.32□□□□□ -1.4
SSH1YBR283C TY2B-LR1P0C2J3 1770 aa6.3□□□□□ -1.4
SSH1YBR283C TY2B-FP0CX63 1770 aa6.3□□□□□ -1.4
SSH1YBR283C TY2B-GR2P0CX64 1770 aa6.3□□□□□ -1.4
SSH1YBR283C TY2B-CP25384 1770 aa6.3□□□□□ -1.4
SSH1YBR283C TY2B-DR2Q03494 1770 aa6.3□□□□□ -1.4
SSH1YBR283C TY1B-DR1Q03855 1755 aa6.3□□□□□ -1.4
SSH1YBR283C TY2B-DR3Q07791 1770 aaKnown RBP6.3□□□□□ -1.4
SSH1YBR283C TY2B-OR1Q12113 1770 aa6.3□□□□□ -1.4
SSH1YBR283C TY2B-DR1Q12472 1770 aa6.3□□□□□ -1.4
SSH1YBR283C TY2B-OR2Q12501 1770 aa6.3□□□□□ -1.4
SSH1YBR283C RKR1Q04781 1562 aa6.26□□□□□ -1.41
SSH1YBR283C TY1B-BRQ12193 1756 aa6.25□□□□□ -1.41
SSH1YBR283C TY1B-GR3Q12316 1755 aa6.25□□□□□ -1.41
SSH1YBR283C TY1B-ORQ92393 1755 aa6.25□□□□□ -1.41
SSH1YBR283C STU1P38198 1513 aa6.24□□□□□ -1.41
SSH1YBR283C CDC25P04821 1589 aa6.24□□□□□ -1.41
SSH1YBR283C TOP2P06786 1428 aaKnown RBP6.24□□□□□ -1.41
SSH1YBR283C POL1P13382 1468 aa6.24□□□□□ -1.41
SSH1YBR283C CHD1P32657 1468 aa6.24□□□□□ -1.41
SSH1YBR283C TY1B-DR3Q99231 1755 aa6.23□□□□□ -1.41
SSH1YBR283C TY2B-BQ12491 1770 aa6.23□□□□□ -1.41
SSH1YBR283C ESC1Q03661 1658 aaKnown RBP6.22□□□□□ -1.41
SSH1YBR283C DNF1P32660 1571 aa6.21□□□□□ -1.41
SSH1YBR283C TY1B-HO13535 1793 aa6.2□□□□□ -1.42
SSH1YBR283C TY1B-DR5P0C2I2 1755 aa6.2□□□□□ -1.42
SSH1YBR283C TY1B-DR6P0C2I3 1755 aa6.2□□□□□ -1.42
SSH1YBR283C TY1B-LR2P0C2I5 1755 aa6.2□□□□□ -1.42
SSH1YBR283C TY1B-LR3P0C2I6 1755 aaKnown RBP6.2□□□□□ -1.42
SSH1YBR283C TY1B-PR1P0C2I9 1755 aaKnown RBP6.2□□□□□ -1.42
SSH1YBR283C TY1B-PR2P0C2J0 1756 aa6.2□□□□□ -1.42
SSH1YBR283C TY1B-PR3P0C2J1 1755 aaKnown RBP6.2□□□□□ -1.42
SSH1YBR283C TY1B-JR1P47098 1755 aa6.2□□□□□ -1.42
SSH1YBR283C TY1B-ML2Q03434 1755 aaKnown RBP6.2□□□□□ -1.42
SSH1YBR283C TY1B-ER1Q03612 1755 aa6.2□□□□□ -1.42
SSH1YBR283C TY1B-ML1Q04711 1755 aaKnown RBP6.2□□□□□ -1.42
SSH1YBR283C TY1B-GR2Q12269 1755 aa6.2□□□□□ -1.42
SSH1YBR283C TY1B-OLQ12273 1755 aa6.2□□□□□ -1.42
SSH1YBR283C TY1B-PLQ12414 1755 aaKnown RBP6.2□□□□□ -1.42
SSH1YBR283C PAN1P32521 1480 aa6.19□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms