RNA–Protein interactions for RNA: YKL062W

MSN4, Transcript of Stress-responsive transcriptional activator, yeastyeast

Gene MSN4, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN4YKL062W MTC1P47018 478 aaKnown RBP12.44□□□□□ -0.42
MSN4YKL062W DRS1P32892 752 aaKnown RBP12.31□□□□□ -0.44
MSN4YKL062W DIP2Q12220 943 aaPredicted RBP10.55□□□□□ -0.72
MSN4YKL062W BFR2Q06631 534 aaKnown RBP10.55□□□□□ -0.72
MSN4YKL062W FAP1P53971 965 aa10.47□□□□□ -0.73
MSN4YKL062W AVT3P36062 692 aa10.34□□□□□ -0.75
MSN4YKL062W ISW2Q08773 1120 aa10.19□□□□□ -0.78
MSN4YKL062W PRI1P10363 409 aa10.12□□□□□ -0.79
MSN4YKL062W RPG1P38249 964 aaKnown RBP10.06□□□□□ -0.8
MSN4YKL062W RSE1Q04693 1361 aaKnown RBP10.01□□□□□ -0.81
MSN4YKL062W AAD16Q02895 342 aa9.98□□□□□ -0.81
MSN4YKL062W PRY3P47033 881 aa9.8□□□□□ -0.84
MSN4YKL062W TFA1P36100 482 aa9.79□□□□□ -0.84
MSN4YKL062W RPL17AP05740 184 aaKnown RBP9.64□□□□□ -0.87
MSN4YKL062W RPL17BP46990 184 aaKnown RBP9.64□□□□□ -0.87
MSN4YKL062W TSR3Q12094 313 aaKnown RBP9.6□□□□□ -0.87
MSN4YKL062W REB1P21538 810 aa9.56□□□□□ -0.88
MSN4YKL062W SPT21P35209 758 aa9.26□□□□□ -0.93
MSN4YKL062W YCK3P39962 524 aa9.24□□□□□ -0.93
MSN4YKL062W MRPL32P25348 183 aa9.23□□□□□ -0.93
MSN4YKL062W HAA1Q12753 694 aaKnown RBP9.23□□□□□ -0.93
MSN4YKL062W RIM101P33400 625 aa9.11□□□□□ -0.95
MSN4YKL062W YKR023WP36119 530 aaKnown RBP9.02□□□□□ -0.96
MSN4YKL062W CDC27P38042 758 aa8.87□□□□□ -0.99
MSN4YKL062W HOP09932 586 aa8.84□□□□□ -0.99
MSN4YKL062W TFC8Q12308 588 aa8.84□□□□□ -0.99
MSN4YKL062W OXP1P28273 1286 aa8.81□□□□□ -1
MSN4YKL062W DCD1P06773 312 aa8.78□□□□□ -1
MSN4YKL062W YIL055CP40523 627 aaKnown RBP8.72□□□□□ -1.01
MSN4YKL062W YGL015CP33199 130 aa8.68□□□□□ -1.02
MSN4YKL062W PTP3P40048 928 aa8.67□□□□□ -1.02
MSN4YKL062W YAH1Q12184 172 aaKnown RBP8.66□□□□□ -1.02
MSN4YKL062W SSP1P38871 571 aa8.61□□□□□ -1.03
MSN4YKL062W BCH2P36122 765 aa8.58□□□□□ -1.04
MSN4YKL062W RSM7P47150 247 aa8.56□□□□□ -1.04
MSN4YKL062W YLR271WQ06152 274 aa8.54□□□□□ -1.04
MSN4YKL062W UBP10P53874 792 aaPredicted RBP8.53□□□□□ -1.04
MSN4YKL062W MAP2P38174 421 aaKnown RBP8.53□□□□□ -1.04
MSN4YKL062W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.51□□□□□ -1.05not detected
MSN4YKL062W SCY1P53009 804 aa8.48□□□□□ -1.05
MSN4YKL062W AI2P03876 854 aa8.43□□□□□ -1.06
MSN4YKL062W EPS1P40557 701 aa8.41□□□□□ -1.06
MSN4YKL062W BBC1P47068 1157 aa8.4□□□□□ -1.06
MSN4YKL062W BDF1P35817 686 aa8.36□□□□□ -1.07
MSN4YKL062W SLX5P32828 619 aaKnown RBP8.34□□□□□ -1.07
MSN4YKL062W MGA2P40578 1113 aa8.34□□□□□ -1.07
MSN4YKL062W PSD2P53037 1138 aaKnown RBP8.33□□□□□ -1.08
MSN4YKL062W CST9Q06032 482 aa8.27□□□□□ -1.09
MSN4YKL062W TIF4632P39936 914 aaKnown RBP8.21□□□□□ -1.1
MSN4YKL062W MRM1P25270 412 aa8.17□□□□□ -1.1
MSN4YKL062W TGL3P40308 642 aa8.15□□□□□ -1.1
MSN4YKL062W RQC2Q12532 1038 aaKnown RBP8.08□□□□□ -1.12
MSN4YKL062W RTG3P38165 486 aa8.05□□□□□ -1.12
MSN4YKL062W RCR1P38212 213 aa8□□□□□ -1.13
MSN4YKL062W DMA1P38823 416 aa7.99□□□□□ -1.13
MSN4YKL062W NSR1P27476 414 aaKnown RBP RIP-Chip data7.97□□□□□ -1.13not detected
MSN4YKL062W VPS29P38759 282 aa7.96□□□□□ -1.13
MSN4YKL062W YAP5P40574 245 aa7.95□□□□□ -1.14
MSN4YKL062W RAM2P29703 316 aa7.94□□□□□ -1.14
MSN4YKL062W YMR1P47147 688 aaKnown RBP RIP-Chip data7.92□□□□□ -1.14not detected
MSN4YKL062W YOR238WQ08634 303 aa7.91□□□□□ -1.14
MSN4YKL062W MST1P07236 462 aa7.88□□□□□ -1.15
MSN4YKL062W DBP1P24784 617 aaKnown RBP7.87□□□□□ -1.15
MSN4YKL062W STS1P38637 319 aa7.85□□□□□ -1.15
MSN4YKL062W YFR006WP43590 535 aa7.85□□□□□ -1.15
MSN4YKL062W PIB1Q06651 286 aa7.85□□□□□ -1.15
MSN4YKL062W MAK11P20484 414 aaKnown RBP7.84□□□□□ -1.15
MSN4YKL062W BUD31P25337 157 aaPredicted RBP7.79□□□□□ -1.16
MSN4YKL062W GTT3P39996 337 aa7.75□□□□□ -1.17
MSN4YKL062W MIF2P35201 549 aa7.74□□□□□ -1.17
MSN4YKL062W SET1P38827 1080 aaKnown RBP7.74□□□□□ -1.17
MSN4YKL062W COQ8P27697 501 aa7.73□□□□□ -1.17
MSN4YKL062W VMA1P17255 1071 aaKnown RBP7.72□□□□□ -1.17
MSN4YKL062W UBP9P39967 754 aa7.7□□□□□ -1.18
MSN4YKL062W EDS1P38073 919 aa7.68□□□□□ -1.18
MSN4YKL062W WSC3Q12215 556 aa7.66□□□□□ -1.18
MSN4YKL062W SAM3Q08986 587 aa7.65□□□□□ -1.18
MSN4YKL062W NOP53Q12080 455 aaKnown RBP7.65□□□□□ -1.18
MSN4YKL062W YBL029C-AQ3E756 94 aa7.65□□□□□ -1.18
MSN4YKL062W PTC3P34221 468 aaKnown RBP7.64□□□□□ -1.19
MSN4YKL062W SAS10Q12136 610 aaPredicted RBP7.62□□□□□ -1.19
MSN4YKL062W VNX1P42839 908 aa7.61□□□□□ -1.19
MSN4YKL062W IFH1P39520 1085 aa7.6□□□□□ -1.19
MSN4YKL062W YOL036WQ08206 761 aa7.6□□□□□ -1.19
MSN4YKL062W SET4P42948 560 aa7.6□□□□□ -1.19
MSN4YKL062W GYP5Q12344 894 aa7.6□□□□□ -1.19
MSN4YKL062W GRE2Q12068 342 aaKnown RBP7.59□□□□□ -1.19
MSN4YKL062W MSB4Q12317 492 aa7.58□□□□□ -1.2
MSN4YKL062W ATH1P48016 1211 aa7.57□□□□□ -1.2
MSN4YKL062W YPR148CQ06523 435 aa7.57□□□□□ -1.2
MSN4YKL062W GUT1P32190 709 aa7.55□□□□□ -1.2
MSN4YKL062W VPS70P47161 811 aa7.55□□□□□ -1.2
MSN4YKL062W SPP1Q03012 353 aa7.55□□□□□ -1.2
MSN4YKL062W ABP1P15891 592 aaKnown RBP7.53□□□□□ -1.2
MSN4YKL062W TIF11P38912 153 aaKnown RBP7.53□□□□□ -1.2
MSN4YKL062W EAP1P36041 632 aaKnown RBP7.52□□□□□ -1.21
MSN4YKL062W DCW1P36091 449 aa7.52□□□□□ -1.21
MSN4YKL062W ULI1P43604 169 aa7.5□□□□□ -1.21
MSN4YKL062W HTA1P04911 132 aaKnown RBP7.49□□□□□ -1.21
MSN4YKL062W HTA2P04912 132 aa7.49□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms