RNA–Protein interactions for RNA: YDR456W

NHX1, Transcript of Na+/H+ and K+/H+ exchanger, yeastyeast

Gene NHX1, Length 1,902 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NHX1YDR456W DRS1P32892 752 aaKnown RBP8.64□□□□□ -1.03
NHX1YDR456W MTC1P47018 478 aaKnown RBP8.59□□□□□ -1.03
NHX1YDR456W TFA1P36100 482 aa7.56□□□□□ -1.2
NHX1YDR456W BFR2Q06631 534 aaKnown RBP7.44□□□□□ -1.22
NHX1YDR456W DIP2Q12220 943 aaPredicted RBP7.35□□□□□ -1.23
NHX1YDR456W AVT3P36062 692 aa7.28□□□□□ -1.24
NHX1YDR456W FAP1P53971 965 aa7.27□□□□□ -1.25
NHX1YDR456W RQC2Q12532 1038 aaKnown RBP6.99□□□□□ -1.29
NHX1YDR456W ISW2Q08773 1120 aa6.93□□□□□ -1.3
NHX1YDR456W PRI1P10363 409 aa6.92□□□□□ -1.3
NHX1YDR456W RPG1P38249 964 aaKnown RBP6.92□□□□□ -1.3
NHX1YDR456W TAF7Q05021 590 aa6.92□□□□□ -1.3
NHX1YDR456W RSE1Q04693 1361 aaKnown RBP6.9□□□□□ -1.31
NHX1YDR456W PRY3P47033 881 aa6.89□□□□□ -1.31
NHX1YDR456W AAD16Q02895 342 aa6.77□□□□□ -1.33
NHX1YDR456W RPL17AP05740 184 aaKnown RBP6.68□□□□□ -1.34
NHX1YDR456W RPL17BP46990 184 aaKnown RBP6.68□□□□□ -1.34
NHX1YDR456W YCK3P39962 524 aa6.64□□□□□ -1.35
NHX1YDR456W TSR3Q12094 313 aaKnown RBP6.62□□□□□ -1.35
NHX1YDR456W REB1P21538 810 aa6.56□□□□□ -1.36
NHX1YDR456W DMA1P38823 416 aa6.56□□□□□ -1.36
NHX1YDR456W SPT21P35209 758 aa6.47□□□□□ -1.37
NHX1YDR456W LEO1P38439 464 aa6.38□□□□□ -1.39
NHX1YDR456W HAA1Q12753 694 aaKnown RBP6.36□□□□□ -1.39
NHX1YDR456W RIM101P33400 625 aa6.35□□□□□ -1.39
NHX1YDR456W YKR023WP36119 530 aaKnown RBP6.29□□□□□ -1.4
NHX1YDR456W MRPL32P25348 183 aa6.25□□□□□ -1.41
NHX1YDR456W SPA2P23201 1466 aaKnown RBP6.25□□□□□ -1.41
NHX1YDR456W OXP1P28273 1286 aa6.21□□□□□ -1.42
NHX1YDR456W DCD1P06773 312 aa6.17□□□□□ -1.42
NHX1YDR456W CDC27P38042 758 aa6.17□□□□□ -1.42
NHX1YDR456W HOP09932 586 aa6.16□□□□□ -1.42
NHX1YDR456W PTP3P40048 928 aa6.16□□□□□ -1.42
NHX1YDR456W TFC8Q12308 588 aa6.12□□□□□ -1.43
NHX1YDR456W SGS1P35187 1447 aa6.11□□□□□ -1.43
NHX1YDR456W YAH1Q12184 172 aaKnown RBP6.09□□□□□ -1.44
NHX1YDR456W SKI3P17883 1432 aaKnown RBP6.03□□□□□ -1.44
NHX1YDR456W LEU3P08638 886 aa6.03□□□□□ -1.44
NHX1YDR456W SSP1P38871 571 aa6.03□□□□□ -1.44
NHX1YDR456W SSN2P38931 1420 aa6.03□□□□□ -1.44
NHX1YDR456W INO80P53115 1489 aa6.02□□□□□ -1.45
NHX1YDR456W ABP1P15891 592 aaKnown RBP6.02□□□□□ -1.45
NHX1YDR456W YLR271WQ06152 274 aa6.01□□□□□ -1.45
NHX1YDR456W YIL055CP40523 627 aaKnown RBP6.01□□□□□ -1.45
NHX1YDR456W SAS10Q12136 610 aaPredicted RBP5.98□□□□□ -1.45
NHX1YDR456W BCH2P36122 765 aa5.96□□□□□ -1.46
NHX1YDR456W RSM7P47150 247 aa5.94□□□□□ -1.46
NHX1YDR456W DMA2P53924 522 aa5.94□□□□□ -1.46
NHX1YDR456W MAP2P38174 421 aaKnown RBP5.87□□□□□ -1.47
NHX1YDR456W IFH1P39520 1085 aa5.87□□□□□ -1.47
NHX1YDR456W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
NHX1YDR456W AI2P03876 854 aa5.86□□□□□ -1.47
NHX1YDR456W CST9Q06032 482 aa5.86□□□□□ -1.47
NHX1YDR456W SCY1P53009 804 aa5.85□□□□□ -1.47
NHX1YDR456W EPS1P40557 701 aa5.84□□□□□ -1.48
NHX1YDR456W PSD2P53037 1138 aaKnown RBP5.84□□□□□ -1.48
NHX1YDR456W YGL015CP33199 130 aa5.82□□□□□ -1.48
NHX1YDR456W NOP2P40991 618 aaKnown RBP5.82□□□□□ -1.48
NHX1YDR456W BDF1P35817 686 aa5.81□□□□□ -1.48
NHX1YDR456W MGA2P40578 1113 aa5.81□□□□□ -1.48
NHX1YDR456W UBP10P53874 792 aaPredicted RBP5.79□□□□□ -1.48
NHX1YDR456W BBC1P47068 1157 aa5.76□□□□□ -1.49
NHX1YDR456W RLF2Q12495 606 aa5.75□□□□□ -1.49
NHX1YDR456W CHD1P32657 1468 aa5.75□□□□□ -1.49
NHX1YDR456W TCB3Q03640 1545 aaKnown RBP5.74□□□□□ -1.49
NHX1YDR456W RPN1P38764 993 aaKnown RBP5.74□□□□□ -1.49
NHX1YDR456W IOC4Q04213 475 aa5.73□□□□□ -1.49
NHX1YDR456W ORC1P54784 914 aaPredicted RBP5.72□□□□□ -1.49
NHX1YDR456W MRM1P25270 412 aa5.7□□□□□ -1.5
NHX1YDR456W RCR1P38212 213 aa5.7□□□□□ -1.5
NHX1YDR456W NAP1P25293 417 aaKnown RBP5.69□□□□□ -1.5
NHX1YDR456W SLX5P32828 619 aaKnown RBP5.68□□□□□ -1.5
NHX1YDR456W BUD31P25337 157 aaPredicted RBP5.66□□□□□ -1.5
NHX1YDR456W MMS22Q06164 1454 aa5.65□□□□□ -1.51
NHX1YDR456W CKB1P43639 278 aa5.62□□□□□ -1.51
NHX1YDR456W RAM2P29703 316 aa5.61□□□□□ -1.51
NHX1YDR456W XRN1P22147 1528 aaKnown RBP5.6□□□□□ -1.51
NHX1YDR456W VPS29P38759 282 aa5.57□□□□□ -1.52
NHX1YDR456W SPT6P23615 1451 aaKnown RBP5.56□□□□□ -1.52
NHX1YDR456W RTG3P38165 486 aa5.56□□□□□ -1.52
NHX1YDR456W NSR1P27476 414 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
NHX1YDR456W THO2P53552 1597 aaKnown RBP5.55□□□□□ -1.52
NHX1YDR456W UFD4P33202 1483 aa5.55□□□□□ -1.52
NHX1YDR456W SPP41P38904 1435 aa5.55□□□□□ -1.52
NHX1YDR456W ENP1P38333 483 aaKnown RBP5.54□□□□□ -1.52
NHX1YDR456W NOP8Q08287 484 aaPredicted RBP5.54□□□□□ -1.52
NHX1YDR456W AIM44Q99299 758 aa5.54□□□□□ -1.52
NHX1YDR456W YML020WQ03722 664 aa5.53□□□□□ -1.52
NHX1YDR456W TY1B-DR4Q07793 1604 aa5.53□□□□□ -1.52
NHX1YDR456W HSL1P34244 1518 aa5.52□□□□□ -1.53
NHX1YDR456W STS1P38637 319 aa5.51□□□□□ -1.53
NHX1YDR456W TIF4632P39936 914 aaKnown RBP5.51□□□□□ -1.53
NHX1YDR456W TGL3P40308 642 aa5.5□□□□□ -1.53
NHX1YDR456W YTA7P40340 1379 aa5.5□□□□□ -1.53
NHX1YDR456W YFR006WP43590 535 aa5.5□□□□□ -1.53
NHX1YDR456W MYO2P19524 1574 aaKnown RBP5.5□□□□□ -1.53
NHX1YDR456W SEC3P33332 1336 aaKnown RBP5.49□□□□□ -1.53
NHX1YDR456W CAB3P36076 571 aa5.49□□□□□ -1.53
NHX1YDR456W PIB1Q06651 286 aa5.49□□□□□ -1.53
NHX1YDR456W SIN3P22579 1536 aa5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms