RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	MTC1	P47018	478 aa	Known RBP	6.09	□□□□□ -1.43
ATG2	YNL242W	BFR2	Q06631	534 aa	Known RBP	5.86	□□□□□ -1.47
ATG2	YNL242W	SGS1	P35187	1447 aa		5.83	□□□□□ -1.48
ATG2	YNL242W	RQC2	Q12532	1038 aa	Known RBP	5.83	□□□□□ -1.48
ATG2	YNL242W	DRS1	P32892	752 aa	Known RBP	5.8	□□□□□ -1.48
ATG2	YNL242W	NOP2	P40991	618 aa	Known RBP	5.73	□□□□□ -1.49
ATG2	YNL242W	SSN2	P38931	1420 aa		5.69	□□□□□ -1.5
ATG2	YNL242W	SPA2	P23201	1466 aa	Known RBP	5.67	□□□□□ -1.5
ATG2	YNL242W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.6	□□□□□ -1.51	not detected
ATG2	YNL242W	INO80	P53115	1489 aa		5.59	□□□□□ -1.51
ATG2	YNL242W	RSE1	Q04693	1361 aa	Known RBP	5.57	□□□□□ -1.52
ATG2	YNL242W	TFA1	P36100	482 aa		5.56	□□□□□ -1.52
ATG2	YNL242W	SAS10	Q12136	610 aa	Predicted RBP	5.51	□□□□□ -1.53
ATG2	YNL242W	CAB3	P36076	571 aa		5.5	□□□□□ -1.53
ATG2	YNL242W	TAF7	Q05021	590 aa		5.46	□□□□□ -1.54
ATG2	YNL242W	SKI3	P17883	1432 aa	Known RBP	5.45	□□□□□ -1.54
ATG2	YNL242W	EBP2	P36049	427 aa	Known RBP	5.42	□□□□□ -1.54
ATG2	YNL242W	LEU3	P08638	886 aa		5.35	□□□□□ -1.55
ATG2	YNL242W	POL5	P39985	1022 aa	Known RBP	5.35	□□□□□ -1.55
ATG2	YNL242W	ENP1	P38333	483 aa	Known RBP	5.34	□□□□□ -1.55
ATG2	YNL242W	YPR148C	Q06523	435 aa		5.32	□□□□□ -1.56
ATG2	YNL242W	TAF2	P23255	1407 aa		5.32	□□□□□ -1.56
ATG2	YNL242W	RTT106	P40161	455 aa		5.31	□□□□□ -1.56
ATG2	YNL242W	MMS22	Q06164	1454 aa		5.29	□□□□□ -1.56
ATG2	YNL242W	SPT7	P35177	1332 aa		5.28	□□□□□ -1.56
ATG2	YNL242W	IFH1	P39520	1085 aa		5.27	□□□□□ -1.57
ATG2	YNL242W	TCB3	Q03640	1545 aa	Known RBP	5.24	□□□□□ -1.57
ATG2	YNL242W	ABP1	P15891	592 aa	Known RBP	5.23	□□□□□ -1.57
ATG2	YNL242W	XRN1	P22147	1528 aa	Known RBP	5.22	□□□□□ -1.57
ATG2	YNL242W	IKI3	Q06706	1349 aa	Known RBP	5.21	□□□□□ -1.57
ATG2	YNL242W	MNN4	P36044	1178 aa		5.21	□□□□□ -1.58
ATG2	YNL242W	ORC1	P54784	914 aa	Predicted RBP	5.21	□□□□□ -1.58
ATG2	YNL242W	AIM44	Q99299	758 aa		5.2	□□□□□ -1.58
ATG2	YNL242W	SIS2	P36024	562 aa		5.2	□□□□□ -1.58
ATG2	YNL242W	AVT3	P36062	692 aa		5.19	□□□□□ -1.58
ATG2	YNL242W	SPT6	P23615	1451 aa	Known RBP	5.19	□□□□□ -1.58
ATG2	YNL242W	YFR016C	P43597	1233 aa	Known RBP	5.19	□□□□□ -1.58
ATG2	YNL242W	LEO1	P38439	464 aa		5.18	□□□□□ -1.58
ATG2	YNL242W	TRM732	Q03496	1420 aa		5.17	□□□□□ -1.58
ATG2	YNL242W	FUN12	P39730	1002 aa	Known RBP	5.17	□□□□□ -1.58
ATG2	YNL242W	NAP1	P25293	417 aa	Known RBP	5.17	□□□□□ -1.58
ATG2	YNL242W	SEC3	P33332	1336 aa	Known RBP	5.16	□□□□□ -1.58
ATG2	YNL242W	SSM4	P40318	1319 aa		5.16	□□□□□ -1.58
ATG2	YNL242W	UFD4	P33202	1483 aa		5.14	□□□□□ -1.59
ATG2	YNL242W	PAF1	P38351	445 aa		5.14	□□□□□ -1.59
ATG2	YNL242W	YTA7	P40340	1379 aa		5.14	□□□□□ -1.59
ATG2	YNL242W	PRS1	P32895	427 aa	Known RBP	5.14	□□□□□ -1.59
ATG2	YNL242W	HSL1	P34244	1518 aa		5.13	□□□□□ -1.59
ATG2	YNL242W	SPP41	P38904	1435 aa		5.13	□□□□□ -1.59
ATG2	YNL242W	CHD1	P32657	1468 aa		5.13	□□□□□ -1.59
ATG2	YNL242W	SCT1	P32784	759 aa		5.13	□□□□□ -1.59
ATG2	YNL242W	PSD2	P53037	1138 aa	Known RBP	5.12	□□□□□ -1.59
ATG2	YNL242W	STU1	P38198	1513 aa		5.12	□□□□□ -1.59
ATG2	YNL242W	EAF7	P53911	425 aa	Known RBP	5.12	□□□□□ -1.59
ATG2	YNL242W	MYO2	P19524	1574 aa	Known RBP	5.11	□□□□□ -1.59
ATG2	YNL242W	STH1	P32597	1359 aa		5.11	□□□□□ -1.59
ATG2	YNL242W	CLC1	P17891	233 aa		5.1	□□□□□ -1.59
ATG2	YNL242W	RPC31	P17890	251 aa		5.09	□□□□□ -1.59
ATG2	YNL242W	PAN1	P32521	1480 aa		5.09	□□□□□ -1.6
ATG2	YNL242W	URN1	Q06525	465 aa	Known RBP	5.09	□□□□□ -1.6
ATG2	YNL242W	REV3	P14284	1504 aa		5.07	□□□□□ -1.6
ATG2	YNL242W	HIR3	P47171	1648 aa		5.07	□□□□□ -1.6
ATG2	YNL242W	CKB1	P43639	278 aa		5.07	□□□□□ -1.6
ATG2	YNL242W	FPR3	P38911	411 aa	Known RBP	5.06	□□□□□ -1.6
ATG2	YNL242W	CFT1	Q06632	1357 aa	Known RBP	5.06	□□□□□ -1.6
ATG2	YNL242W	BPT1	P14772	1559 aa		5.06	□□□□□ -1.6
ATG2	YNL242W	NOP7	P53261	605 aa	Known RBP	5.05	□□□□□ -1.6
ATG2	YNL242W	SCC2	Q04002	1493 aa		5.04	□□□□□ -1.6
ATG2	YNL242W	BUD4	P47136	1447 aa		5.03	□□□□□ -1.6
ATG2	YNL242W	IME2	P32581	645 aa		5.03	□□□□□ -1.6
ATG2	YNL242W	SMC4	Q12267	1418 aa		5.02	□□□□□ -1.61
ATG2	YNL242W	MIF2	P35201	549 aa		5.01	□□□□□ -1.61
ATG2	YNL242W	TCB2	P48231	1178 aa		5.01	□□□□□ -1.61
ATG2	YNL242W	CWC22	P53333	577 aa	Known RBP	5.01	□□□□□ -1.61
ATG2	YNL242W	THO2	P53552	1597 aa	Known RBP	5	□□□□□ -1.61
ATG2	YNL242W	MRX12	P47084	519 aa		5	□□□□□ -1.61
ATG2	YNL242W	TY1B-DR4	Q07793	1604 aa		5	□□□□□ -1.61
ATG2	YNL242W	POL1	P13382	1468 aa		4.99	□□□□□ -1.61
ATG2	YNL242W	ASF1	P32447	279 aa		4.99	□□□□□ -1.61
ATG2	YNL242W	RNA1	P11745	407 aa	Known RBP	4.98	□□□□□ -1.61
ATG2	YNL242W	TSC11	P40061	1430 aa		4.98	□□□□□ -1.61
ATG2	YNL242W	YRB30	P53107	440 aa	Predicted RBP	4.97	□□□□□ -1.61
ATG2	YNL242W	DJP1	P40564	432 aa		4.97	□□□□□ -1.61
ATG2	YNL242W	ECM5	Q03214	1411 aa		4.97	□□□□□ -1.61
ATG2	YNL242W	YJL181W	P46987	611 aa		4.97	□□□□□ -1.61
ATG2	YNL242W	MON2	P48563	1636 aa	Predicted RBP	4.97	□□□□□ -1.61
ATG2	YNL242W	GEA1	P47102	1408 aa	Predicted RBP	4.96	□□□□□ -1.61
ATG2	YNL242W	PDS5	Q04264	1277 aa		4.96	□□□□□ -1.62
ATG2	YNL242W	SSK2	P53599	1579 aa		4.96	□□□□□ -1.62
ATG2	YNL242W	OPY1	P38271	328 aa		4.95	□□□□□ -1.62
ATG2	YNL242W	BUD21	Q08492	214 aa	Predicted RBP	4.94	□□□□□ -1.62
ATG2	YNL242W	QCR6	P00127	147 aa		4.93	□□□□□ -1.62
ATG2	YNL242W	RPS0B	P46654	252 aa	Known RBP	4.93	□□□□□ -1.62
ATG2	YNL242W	SNF7	P39929	240 aa	Known RBP	4.92	□□□□□ -1.62
ATG2	YNL242W	SWR1	Q05471	1514 aa		4.92	□□□□□ -1.62
ATG2	YNL242W	MHP1	P43638	1398 aa		4.92	□□□□□ -1.62
ATG2	YNL242W	SNQ2	P32568	1501 aa	Known RBP	4.92	□□□□□ -1.62
ATG2	YNL242W	PDR10	P51533	1564 aa		4.92	□□□□□ -1.62
ATG2	YNL242W	NST1	P53935	1240 aa		4.92	□□□□□ -1.62
ATG2	YNL242W	DNA2	P38859	1522 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms