RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeastyeast

Gene LSB1, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB1YGR136W MTC1P47018 478 aaKnown RBP13.31□□□□□ -0.28
LSB1YGR136W FAP1P53971 965 aa12.83□□□□□ -0.36
LSB1YGR136W PRY3P47033 881 aa12.09□□□□□ -0.47
LSB1YGR136W AAD16Q02895 342 aa11.71□□□□□ -0.53
LSB1YGR136W PRI1P10363 409 aa11.67□□□□□ -0.54
LSB1YGR136W DRS1P32892 752 aaKnown RBP11.63□□□□□ -0.55
LSB1YGR136W YCK3P39962 524 aa11.41□□□□□ -0.58
LSB1YGR136W HAA1Q12753 694 aaKnown RBP11.35□□□□□ -0.59
LSB1YGR136W ISW2Q08773 1120 aa11.22□□□□□ -0.61
LSB1YGR136W RPG1P38249 964 aaKnown RBP11.11□□□□□ -0.63
LSB1YGR136W TSR3Q12094 313 aaKnown RBP10.96□□□□□ -0.65
LSB1YGR136W MRPL32P25348 183 aa10.57□□□□□ -0.72
LSB1YGR136W DIP2Q12220 943 aaPredicted RBP10.5□□□□□ -0.73
LSB1YGR136W RSE1Q04693 1361 aaKnown RBP10.39□□□□□ -0.75
LSB1YGR136W YGL015CP33199 130 aa10.38□□□□□ -0.75
LSB1YGR136W REB1P21538 810 aa10.11□□□□□ -0.79
LSB1YGR136W RPL17AP05740 184 aaKnown RBP10.08□□□□□ -0.8
LSB1YGR136W RPL17BP46990 184 aaKnown RBP10.08□□□□□ -0.8
LSB1YGR136W AVT3P36062 692 aa9.91□□□□□ -0.82
LSB1YGR136W CDC27P38042 758 aa9.88□□□□□ -0.83
LSB1YGR136W BUD31P25337 157 aaPredicted RBP9.85□□□□□ -0.83
LSB1YGR136W UBP10P53874 792 aaPredicted RBP9.74□□□□□ -0.85
LSB1YGR136W YKR023WP36119 530 aaKnown RBP9.68□□□□□ -0.86
LSB1YGR136W MAP2P38174 421 aaKnown RBP9.66□□□□□ -0.86
LSB1YGR136W SPT21P35209 758 aa9.61□□□□□ -0.87
LSB1YGR136W TFC8Q12308 588 aa9.48□□□□□ -0.89
LSB1YGR136W HOP09932 586 aa9.45□□□□□ -0.9
LSB1YGR136W DCD1P06773 312 aa9.41□□□□□ -0.9
LSB1YGR136W TIF4632P39936 914 aaKnown RBP9.34□□□□□ -0.91
LSB1YGR136W TGL3P40308 642 aa9.34□□□□□ -0.91
LSB1YGR136W SCY1P53009 804 aa9.32□□□□□ -0.92
LSB1YGR136W SIS1P25294 352 aaKnown RBP9.29□□□□□ -0.92
LSB1YGR136W BFR2Q06631 534 aaKnown RBP9.29□□□□□ -0.92
LSB1YGR136W UBP9P39967 754 aa9.28□□□□□ -0.92
LSB1YGR136W SLX5P32828 619 aaKnown RBP9.27□□□□□ -0.93
LSB1YGR136W BCH2P36122 765 aa9.13□□□□□ -0.95
LSB1YGR136W RIM101P33400 625 aa9.12□□□□□ -0.95
LSB1YGR136W MST1P07236 462 aa8.86□□□□□ -0.99
LSB1YGR136W EPS1P40557 701 aa8.85□□□□□ -0.99
LSB1YGR136W BDF1P35817 686 aa8.84□□□□□ -0.99
LSB1YGR136W YBL029C-AQ3E756 94 aa8.78□□□□□ -1
LSB1YGR136W OXP1P28273 1286 aa8.77□□□□□ -1.01
LSB1YGR136W YOR238WQ08634 303 aa8.77□□□□□ -1.01
LSB1YGR136W NSR1P27476 414 aaKnown RBP RIP-Chip data8.7□□□□□ -1.02not detected
LSB1YGR136W VNX1P42839 908 aa8.69□□□□□ -1.02
LSB1YGR136W PTP3P40048 928 aa8.64□□□□□ -1.03
LSB1YGR136W YIL055CP40523 627 aaKnown RBP8.64□□□□□ -1.03
LSB1YGR136W YAP5P40574 245 aa8.59□□□□□ -1.03
LSB1YGR136W SPP1Q03012 353 aa8.59□□□□□ -1.03
LSB1YGR136W BBC1P47068 1157 aa8.57□□□□□ -1.04
LSB1YGR136W RSM7P47150 247 aa8.53□□□□□ -1.04
LSB1YGR136W WSC3Q12215 556 aa8.52□□□□□ -1.05
LSB1YGR136W AIR2Q12476 344 aaKnown RBP8.51□□□□□ -1.05
LSB1YGR136W AI2P03876 854 aa8.5□□□□□ -1.05
LSB1YGR136W TFA1P36100 482 aa8.5□□□□□ -1.05
LSB1YGR136W TIF11P38912 153 aaKnown RBP8.48□□□□□ -1.05
LSB1YGR136W FKH1P40466 484 aa8.46□□□□□ -1.06
LSB1YGR136W YJL171CP46992 396 aa8.46□□□□□ -1.06
LSB1YGR136W GTT3P39996 337 aa8.41□□□□□ -1.06
LSB1YGR136W YAH1Q12184 172 aaKnown RBP8.36□□□□□ -1.07
LSB1YGR136W LDB19Q12502 818 aa8.33□□□□□ -1.08
LSB1YGR136W ULI1P43604 169 aa8.32□□□□□ -1.08
LSB1YGR136W IOC2Q12072 812 aa8.32□□□□□ -1.08
LSB1YGR136W BMT6Q12291 365 aa8.29□□□□□ -1.08
LSB1YGR136W YLR271WQ06152 274 aa8.22□□□□□ -1.09
LSB1YGR136W PIB1Q06651 286 aa8.22□□□□□ -1.09
LSB1YGR136W MSB4Q12317 492 aa8.22□□□□□ -1.09
LSB1YGR136W PSD2P53037 1138 aaKnown RBP8.2□□□□□ -1.1
LSB1YGR136W EAP1P36041 632 aaKnown RBP8.19□□□□□ -1.1
LSB1YGR136W MRM1P25270 412 aa8.14□□□□□ -1.11
LSB1YGR136W RTG1P32607 177 aa8.13□□□□□ -1.11
LSB1YGR136W NCR1Q12200 1170 aa8.11□□□□□ -1.11
LSB1YGR136W TRP5P00931 707 aaKnown RBP8.1□□□□□ -1.11
LSB1YGR136W YOL036WQ08206 761 aa8.1□□□□□ -1.11
LSB1YGR136W SET4P42948 560 aa8.08□□□□□ -1.12
LSB1YGR136W YNL035CP53962 389 aaKnown RBP8.06□□□□□ -1.12
LSB1YGR136W SEC61P32915 480 aa8.05□□□□□ -1.12
LSB1YGR136W YMR1P47147 688 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
LSB1YGR136W DBP1P24784 617 aaKnown RBP8.01□□□□□ -1.13
LSB1YGR136W VPS29P38759 282 aa8□□□□□ -1.13
LSB1YGR136W VMA1P17255 1071 aaKnown RBP7.98□□□□□ -1.13
LSB1YGR136W SAM3Q08986 587 aa7.98□□□□□ -1.13
LSB1YGR136W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.97□□□□□ -1.13not detected
LSB1YGR136W TFG1P41895 735 aaPredicted RBP7.95□□□□□ -1.14
LSB1YGR136W YFR006WP43590 535 aa7.95□□□□□ -1.14
LSB1YGR136W RTG3P38165 486 aa7.94□□□□□ -1.14
LSB1YGR136W STS1P38637 319 aa7.92□□□□□ -1.14
LSB1YGR136W SSP1P38871 571 aa7.92□□□□□ -1.14
LSB1YGR136W DAN4P47179 1161 aa7.9□□□□□ -1.14
LSB1YGR136W JIP4Q03361 876 aa7.89□□□□□ -1.15
LSB1YGR136W BCK2P33306 851 aa7.88□□□□□ -1.15
LSB1YGR136W SAP30P38429 201 aa7.88□□□□□ -1.15
LSB1YGR136W CST9Q06032 482 aa7.87□□□□□ -1.15
LSB1YGR136W ABP1P15891 592 aaKnown RBP7.86□□□□□ -1.15
LSB1YGR136W CHL1P22516 861 aaPredicted RBP7.86□□□□□ -1.15
LSB1YGR136W YDL129WQ07555 291 aa7.85□□□□□ -1.15
LSB1YGR136W MGA2P40578 1113 aa7.84□□□□□ -1.15
LSB1YGR136W GYP5Q12344 894 aa7.81□□□□□ -1.16
LSB1YGR136W PRE3P38624 215 aa7.8□□□□□ -1.16
LSB1YGR136W HTA1P04911 132 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms