RNA–Protein interactions for RNA: YAL003W

EFB1, Transcript of Translation elongation factor 1 beta, yeastyeast

Gene EFB1, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFB1YAL003W MTC1P47018 478 aaKnown RBP11.94□□□□□ -0.5
EFB1YAL003W FAP1P53971 965 aa11.4□□□□□ -0.58
EFB1YAL003W PRY3P47033 881 aa10.77□□□□□ -0.69
EFB1YAL003W DRS1P32892 752 aaKnown RBP10.5□□□□□ -0.73
EFB1YAL003W PRI1P10363 409 aa10.44□□□□□ -0.74
EFB1YAL003W AAD16Q02895 342 aa10.43□□□□□ -0.74
EFB1YAL003W YCK3P39962 524 aa10.26□□□□□ -0.77
EFB1YAL003W HAA1Q12753 694 aaKnown RBP10.07□□□□□ -0.8
EFB1YAL003W ISW2Q08773 1120 aa9.99□□□□□ -0.81
EFB1YAL003W RPG1P38249 964 aaKnown RBP9.94□□□□□ -0.82
EFB1YAL003W TSR3Q12094 313 aaKnown RBP9.82□□□□□ -0.84
EFB1YAL003W DIP2Q12220 943 aaPredicted RBP9.44□□□□□ -0.9
EFB1YAL003W MRPL32P25348 183 aa9.41□□□□□ -0.9
EFB1YAL003W RSE1Q04693 1361 aaKnown RBP9.3□□□□□ -0.92
EFB1YAL003W YGL015CP33199 130 aa9.19□□□□□ -0.94
EFB1YAL003W RPL17AP05740 184 aaKnown RBP9.06□□□□□ -0.96
EFB1YAL003W RPL17BP46990 184 aaKnown RBP9.06□□□□□ -0.96
EFB1YAL003W REB1P21538 810 aa9.03□□□□□ -0.96
EFB1YAL003W AVT3P36062 692 aa8.96□□□□□ -0.98
EFB1YAL003W CDC27P38042 758 aa8.88□□□□□ -0.99
EFB1YAL003W BUD31P25337 157 aaPredicted RBP8.75□□□□□ -1.01
EFB1YAL003W YKR023WP36119 530 aaKnown RBP8.71□□□□□ -1.02
EFB1YAL003W UBP10P53874 792 aaPredicted RBP8.68□□□□□ -1.02
EFB1YAL003W SPT21P35209 758 aa8.67□□□□□ -1.02
EFB1YAL003W MAP2P38174 421 aaKnown RBP8.66□□□□□ -1.02
EFB1YAL003W HOP09932 586 aa8.51□□□□□ -1.05
EFB1YAL003W TFC8Q12308 588 aa8.51□□□□□ -1.05
EFB1YAL003W DCD1P06773 312 aa8.49□□□□□ -1.05
EFB1YAL003W BFR2Q06631 534 aaKnown RBP8.42□□□□□ -1.06
EFB1YAL003W SCY1P53009 804 aa8.36□□□□□ -1.07
EFB1YAL003W TGL3P40308 642 aa8.29□□□□□ -1.08
EFB1YAL003W TIF4632P39936 914 aaKnown RBP8.28□□□□□ -1.08
EFB1YAL003W SLX5P32828 619 aaKnown RBP8.27□□□□□ -1.09
EFB1YAL003W SIS1P25294 352 aaKnown RBP8.22□□□□□ -1.09
EFB1YAL003W RIM101P33400 625 aa8.21□□□□□ -1.1
EFB1YAL003W BCH2P36122 765 aa8.2□□□□□ -1.1
EFB1YAL003W UBP9P39967 754 aa8.19□□□□□ -1.1
EFB1YAL003W EPS1P40557 701 aa7.96□□□□□ -1.14
EFB1YAL003W BDF1P35817 686 aa7.94□□□□□ -1.14
EFB1YAL003W OXP1P28273 1286 aa7.93□□□□□ -1.14
EFB1YAL003W MST1P07236 462 aa7.9□□□□□ -1.14
EFB1YAL003W YBL029C-AQ3E756 94 aa7.85□□□□□ -1.15
EFB1YAL003W YOR238WQ08634 303 aa7.81□□□□□ -1.16
EFB1YAL003W NSR1P27476 414 aaKnown RBP RIP-Chip data7.76□□□□□ -1.17not detected
EFB1YAL003W PTP3P40048 928 aa7.75□□□□□ -1.17
EFB1YAL003W VNX1P42839 908 aa7.75□□□□□ -1.17
EFB1YAL003W SGS1P35187 1447 aa7.74□□□□□ -1.17
EFB1YAL003W YIL055CP40523 627 aaKnown RBP7.73□□□□□ -1.17
EFB1YAL003W MON2P48563 1636 aaPredicted RBP7.67□□□□□ -1.18
EFB1YAL003W YAP5P40574 245 aa7.66□□□□□ -1.18
EFB1YAL003W RSM7P47150 247 aa7.66□□□□□ -1.18
EFB1YAL003W INO80P53115 1489 aa7.66□□□□□ -1.18
EFB1YAL003W BBC1P47068 1157 aa7.65□□□□□ -1.18
EFB1YAL003W SPP1Q03012 353 aa7.65□□□□□ -1.18
EFB1YAL003W AI2P03876 854 aa7.64□□□□□ -1.19
EFB1YAL003W TCB3Q03640 1545 aaKnown RBP7.62□□□□□ -1.19
EFB1YAL003W WSC3Q12215 556 aa7.62□□□□□ -1.19
EFB1YAL003W AIR2Q12476 344 aaKnown RBP7.59□□□□□ -1.19
EFB1YAL003W FKH1P40466 484 aa7.56□□□□□ -1.2
EFB1YAL003W TIF11P38912 153 aaKnown RBP7.55□□□□□ -1.2
EFB1YAL003W YAH1Q12184 172 aaKnown RBP7.55□□□□□ -1.2
EFB1YAL003W TY1B-DR4Q07793 1604 aa7.54□□□□□ -1.2
EFB1YAL003W GTT3P39996 337 aa7.49□□□□□ -1.21
EFB1YAL003W YJL171CP46992 396 aa7.48□□□□□ -1.21
EFB1YAL003W YLR271WQ06152 274 aa7.44□□□□□ -1.22
EFB1YAL003W SWR1Q05471 1514 aa7.43□□□□□ -1.22
EFB1YAL003W IOC2Q12072 812 aa7.43□□□□□ -1.22
EFB1YAL003W LDB19Q12502 818 aa7.43□□□□□ -1.22
EFB1YAL003W ULI1P43604 169 aa7.42□□□□□ -1.22
EFB1YAL003W PIB1Q06651 286 aa7.42□□□□□ -1.22
EFB1YAL003W PSD2P53037 1138 aaKnown RBP7.41□□□□□ -1.22
EFB1YAL003W BMT6Q12291 365 aa7.36□□□□□ -1.23
EFB1YAL003W HSL1P34244 1518 aa7.33□□□□□ -1.24
EFB1YAL003W MRM1P25270 412 aa7.33□□□□□ -1.24
EFB1YAL003W SPT6P23615 1451 aaKnown RBP7.32□□□□□ -1.24
EFB1YAL003W MSB4Q12317 492 aa7.32□□□□□ -1.24
EFB1YAL003W SSN2P38931 1420 aa7.29□□□□□ -1.24
EFB1YAL003W DNA2P38859 1522 aa7.29□□□□□ -1.24
EFB1YAL003W SPA2P23201 1466 aaKnown RBP7.28□□□□□ -1.24
EFB1YAL003W EAP1P36041 632 aaKnown RBP7.27□□□□□ -1.25
EFB1YAL003W YOL036WQ08206 761 aa7.27□□□□□ -1.25
EFB1YAL003W RTG1P32607 177 aa7.26□□□□□ -1.25
EFB1YAL003W KOG1P38873 1557 aa7.25□□□□□ -1.25
EFB1YAL003W TRP5P00931 707 aaKnown RBP7.24□□□□□ -1.25
EFB1YAL003W SET4P42948 560 aa7.24□□□□□ -1.25
EFB1YAL003W VPS29P38759 282 aa7.21□□□□□ -1.26
EFB1YAL003W NCR1Q12200 1170 aa7.21□□□□□ -1.26
EFB1YAL003W YMR1P47147 688 aaKnown RBP RIP-Chip data7.2□□□□□ -1.26not detected
EFB1YAL003W HIR3P47171 1648 aa7.19□□□□□ -1.26
EFB1YAL003W DBP1P24784 617 aaKnown RBP7.19□□□□□ -1.26
EFB1YAL003W TFA1P36100 482 aa7.18□□□□□ -1.26
EFB1YAL003W YNL035CP53962 389 aaKnown RBP7.18□□□□□ -1.26
EFB1YAL003W YFR006WP43590 535 aa7.17□□□□□ -1.26
EFB1YAL003W VMA1P17255 1071 aaKnown RBP7.16□□□□□ -1.26
EFB1YAL003W SEC61P32915 480 aa7.16□□□□□ -1.26
EFB1YAL003W STS1P38637 319 aa7.15□□□□□ -1.26
EFB1YAL003W SSP1P38871 571 aa7.15□□□□□ -1.26
EFB1YAL003W SAM3Q08986 587 aa7.15□□□□□ -1.26
EFB1YAL003W CST9Q06032 482 aa7.14□□□□□ -1.27
EFB1YAL003W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.14□□□□□ -1.27not detected
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms