RNA–Protein interactions for RNA: YNL245C

CWC25, Transcript of Splicing factor required for the first step of pre-mRNA splicing, yeastyeast

Gene CWC25, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CWC25YNL245C DRS1P32892 752 aaKnown RBP17.9■□□□□ 0.46
CWC25YNL245C MTC1P47018 478 aaKnown RBP17.55■□□□□ 0.4
CWC25YNL245C BFR2Q06631 534 aaKnown RBP15.59■□□□□ 0.09
CWC25YNL245C DIP2Q12220 943 aaPredicted RBP15.15■□□□□ 0.02
CWC25YNL245C AVT3P36062 692 aa14.99□□□□□ -0.01
CWC25YNL245C TFA1P36100 482 aa14.8□□□□□ -0.04
CWC25YNL245C ISW2Q08773 1120 aa14.22□□□□□ -0.13
CWC25YNL245C RSE1Q04693 1361 aaKnown RBP14.22□□□□□ -0.13
CWC25YNL245C FAP1P53971 965 aa14.16□□□□□ -0.14
CWC25YNL245C RPG1P38249 964 aaKnown RBP14.04□□□□□ -0.16
CWC25YNL245C PRI1P10363 409 aa13.95□□□□□ -0.18
CWC25YNL245C RPL17AP05740 184 aaKnown RBP13.69□□□□□ -0.22
CWC25YNL245C RPL17BP46990 184 aaKnown RBP13.69□□□□□ -0.22
CWC25YNL245C AAD16Q02895 342 aa13.68□□□□□ -0.22
CWC25YNL245C REB1P21538 810 aa13.49□□□□□ -0.25
CWC25YNL245C TSR3Q12094 313 aaKnown RBP13.3□□□□□ -0.28
CWC25YNL245C PRY3P47033 881 aa13.24□□□□□ -0.29
CWC25YNL245C SPT21P35209 758 aa13.17□□□□□ -0.3
CWC25YNL245C RIM101P33400 625 aa13.04□□□□□ -0.32
CWC25YNL245C PTP3P40048 928 aa12.8□□□□□ -0.36
CWC25YNL245C RQC2Q12532 1038 aaKnown RBP12.78□□□□□ -0.36
CWC25YNL245C MRPL32P25348 183 aa12.75□□□□□ -0.37
CWC25YNL245C YKR023WP36119 530 aaKnown RBP12.7□□□□□ -0.38
CWC25YNL245C OXP1P28273 1286 aa12.67□□□□□ -0.38
CWC25YNL245C SSP1P38871 571 aa12.58□□□□□ -0.4
CWC25YNL245C YAH1Q12184 172 aaKnown RBP12.55□□□□□ -0.4
CWC25YNL245C YCK3P39962 524 aa12.51□□□□□ -0.41
CWC25YNL245C YIL055CP40523 627 aaKnown RBP12.5□□□□□ -0.41
CWC25YNL245C HOP09932 586 aa12.47□□□□□ -0.41
CWC25YNL245C HAA1Q12753 694 aaKnown RBP12.46□□□□□ -0.41
CWC25YNL245C TFC8Q12308 588 aa12.44□□□□□ -0.42
CWC25YNL245C CDC27P38042 758 aa12.39□□□□□ -0.43
CWC25YNL245C DCD1P06773 312 aa12.38□□□□□ -0.43
CWC25YNL245C YLR271WQ06152 274 aa12.36□□□□□ -0.43
CWC25YNL245C ARP8Q12386 881 aaKnown RBP RIP-Chip data12.36□□□□□ -0.43not detected
CWC25YNL245C DMA1P38823 416 aa12.31□□□□□ -0.44
CWC25YNL245C RSM7P47150 247 aa12.29□□□□□ -0.44
CWC25YNL245C MGA2P40578 1113 aa12.11□□□□□ -0.47
CWC25YNL245C BCH2P36122 765 aa12.1□□□□□ -0.47
CWC25YNL245C AI2P03876 854 aa12.06□□□□□ -0.48
CWC25YNL245C CST9Q06032 482 aa12.01□□□□□ -0.49
CWC25YNL245C PSD2P53037 1138 aaKnown RBP11.99□□□□□ -0.49
CWC25YNL245C BBC1P47068 1157 aa11.97□□□□□ -0.49
CWC25YNL245C EPS1P40557 701 aa11.92□□□□□ -0.5
CWC25YNL245C SCY1P53009 804 aa11.87□□□□□ -0.51
CWC25YNL245C MAP2P38174 421 aaKnown RBP11.83□□□□□ -0.52
CWC25YNL245C BDF1P35817 686 aa11.81□□□□□ -0.52
CWC25YNL245C UBP10P53874 792 aaPredicted RBP11.81□□□□□ -0.52
CWC25YNL245C YGL015CP33199 130 aa11.8□□□□□ -0.52
CWC25YNL245C MRM1P25270 412 aa11.72□□□□□ -0.53
CWC25YNL245C SLX5P32828 619 aaKnown RBP11.62□□□□□ -0.55
CWC25YNL245C RAM2P29703 316 aa11.59□□□□□ -0.55
CWC25YNL245C RCR1P38212 213 aa11.59□□□□□ -0.55
CWC25YNL245C RTG3P38165 486 aa11.55□□□□□ -0.56
CWC25YNL245C SAS10Q12136 610 aaPredicted RBP11.53□□□□□ -0.56
CWC25YNL245C VPS29P38759 282 aa11.4□□□□□ -0.58
CWC25YNL245C SET1P38827 1080 aaKnown RBP11.4□□□□□ -0.58
CWC25YNL245C MAK11P20484 414 aaKnown RBP11.38□□□□□ -0.59
CWC25YNL245C TIF4632P39936 914 aaKnown RBP11.34□□□□□ -0.59
CWC25YNL245C YMR1P47147 688 aaKnown RBP RIP-Chip data11.3□□□□□ -0.6not detected
CWC25YNL245C STS1P38637 319 aa11.25□□□□□ -0.61
CWC25YNL245C LEU3P08638 886 aa11.23□□□□□ -0.61
CWC25YNL245C DBP1P24784 617 aaKnown RBP11.23□□□□□ -0.61
CWC25YNL245C COQ8P27697 501 aa11.23□□□□□ -0.61
CWC25YNL245C TGL3P40308 642 aa11.23□□□□□ -0.61
CWC25YNL245C YFR006WP43590 535 aa11.23□□□□□ -0.61
CWC25YNL245C LEO1P38439 464 aa11.22□□□□□ -0.61
CWC25YNL245C VPS70P47161 811 aa11.22□□□□□ -0.61
CWC25YNL245C YPR148CQ06523 435 aa11.22□□□□□ -0.61
CWC25YNL245C IFH1P39520 1085 aa11.21□□□□□ -0.61
CWC25YNL245C YOR238WQ08634 303 aa11.21□□□□□ -0.61
CWC25YNL245C NSR1P27476 414 aaKnown RBP RIP-Chip data11.17□□□□□ -0.62not detected
CWC25YNL245C MIF2P35201 549 aa11.17□□□□□ -0.62
CWC25YNL245C YAP5P40574 245 aa11.15□□□□□ -0.62
CWC25YNL245C CKB1P43639 278 aa11.14□□□□□ -0.63
CWC25YNL245C PIB1Q06651 286 aa11.14□□□□□ -0.63
CWC25YNL245C EDS1P38073 919 aa11.12□□□□□ -0.63
CWC25YNL245C SPB4P25808 606 aaPredicted RBP11.09□□□□□ -0.63
CWC25YNL245C NOP53Q12080 455 aaKnown RBP11.09□□□□□ -0.63
CWC25YNL245C PTC3P34221 468 aaKnown RBP11.01□□□□□ -0.65
CWC25YNL245C VMA1P17255 1071 aaKnown RBP10.99□□□□□ -0.65
CWC25YNL245C PBS2P08018 668 aa10.95□□□□□ -0.66
CWC25YNL245C MST1P07236 462 aa10.92□□□□□ -0.66
CWC25YNL245C DSF2P38213 736 aa10.91□□□□□ -0.66
CWC25YNL245C RPN1P38764 993 aaKnown RBP10.91□□□□□ -0.66
CWC25YNL245C REF2P42073 533 aaPredicted RBP10.9□□□□□ -0.66
CWC25YNL245C TAF7Q05021 590 aa10.88□□□□□ -0.67
CWC25YNL245C GTT3P39996 337 aa10.87□□□□□ -0.67
CWC25YNL245C ATH1P48016 1211 aa10.86□□□□□ -0.67
CWC25YNL245C GRE2Q12068 342 aaKnown RBP10.86□□□□□ -0.67
CWC25YNL245C SAM3Q08986 587 aa10.85□□□□□ -0.67
CWC25YNL245C GUT1P32190 709 aa10.81□□□□□ -0.68
CWC25YNL245C MAM3Q12296 706 aa10.81□□□□□ -0.68
CWC25YNL245C GYP5Q12344 894 aa10.79□□□□□ -0.68
CWC25YNL245C IES2P40154 320 aa10.76□□□□□ -0.69
CWC25YNL245C VHR2P40041 505 aa10.75□□□□□ -0.69
CWC25YNL245C MAK21Q12176 1025 aaKnown RBP10.75□□□□□ -0.69
CWC25YNL245C COX6P00427 148 aa10.74□□□□□ -0.69
CWC25YNL245C YOL036WQ08206 761 aa10.74□□□□□ -0.69
CWC25YNL245C SET4P42948 560 aa10.71□□□□□ -0.69
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms