RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeastyeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HPR1YDR138W DRS1P32892 752 aaKnown RBP10.56□□□□□ -0.72
HPR1YDR138W MTC1P47018 478 aaKnown RBP9.84□□□□□ -0.83
HPR1YDR138W TFA1P36100 482 aa9.42□□□□□ -0.9
HPR1YDR138W BFR2Q06631 534 aaKnown RBP9.41□□□□□ -0.9
HPR1YDR138W AVT3P36062 692 aa8.94□□□□□ -0.98
HPR1YDR138W DIP2Q12220 943 aaPredicted RBP8.78□□□□□ -1
HPR1YDR138W RQC2Q12532 1038 aaKnown RBP8.38□□□□□ -1.07
HPR1YDR138W DMA1P38823 416 aa8.05□□□□□ -1.12
HPR1YDR138W RSE1Q04693 1361 aaKnown RBP8□□□□□ -1.13
HPR1YDR138W TAF7Q05021 590 aa7.95□□□□□ -1.14
HPR1YDR138W PTP3P40048 928 aa7.75□□□□□ -1.17
HPR1YDR138W ISW2Q08773 1120 aa7.72□□□□□ -1.17
HPR1YDR138W RPL17AP05740 184 aaKnown RBP7.7□□□□□ -1.18
HPR1YDR138W RPG1P38249 964 aaKnown RBP7.7□□□□□ -1.18
HPR1YDR138W RPL17BP46990 184 aaKnown RBP7.7□□□□□ -1.18
HPR1YDR138W LEO1P38439 464 aa7.62□□□□□ -1.19
HPR1YDR138W RIM101P33400 625 aa7.62□□□□□ -1.19
HPR1YDR138W SPT21P35209 758 aa7.62□□□□□ -1.19
HPR1YDR138W PRI1P10363 409 aa7.53□□□□□ -1.2
HPR1YDR138W SSP1P38871 571 aa7.52□□□□□ -1.21
HPR1YDR138W OXP1P28273 1286 aa7.47□□□□□ -1.21
HPR1YDR138W REB1P21538 810 aa7.46□□□□□ -1.22
HPR1YDR138W SAS10Q12136 610 aaPredicted RBP7.42□□□□□ -1.22
HPR1YDR138W LEU3P08638 886 aa7.36□□□□□ -1.23
HPR1YDR138W YLR271WQ06152 274 aa7.36□□□□□ -1.23
HPR1YDR138W YAH1Q12184 172 aaKnown RBP7.32□□□□□ -1.24
HPR1YDR138W YKR023WP36119 530 aaKnown RBP7.22□□□□□ -1.25
HPR1YDR138W ABP1P15891 592 aaKnown RBP7.21□□□□□ -1.25
HPR1YDR138W AAD16Q02895 342 aa7.21□□□□□ -1.26
HPR1YDR138W CST9Q06032 482 aa7.2□□□□□ -1.26
HPR1YDR138W TSR3Q12094 313 aaKnown RBP7.19□□□□□ -1.26
HPR1YDR138W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.19□□□□□ -1.26not detected
HPR1YDR138W MGA2P40578 1113 aa7.17□□□□□ -1.26
HPR1YDR138W DMA2P53924 522 aa7.16□□□□□ -1.26
HPR1YDR138W FAP1P53971 965 aa7.15□□□□□ -1.26
HPR1YDR138W YIL055CP40523 627 aaKnown RBP7.12□□□□□ -1.27
HPR1YDR138W RSM7P47150 247 aa7.1□□□□□ -1.27
HPR1YDR138W PSD2P53037 1138 aaKnown RBP7.07□□□□□ -1.28
HPR1YDR138W RPN1P38764 993 aaKnown RBP7.03□□□□□ -1.28
HPR1YDR138W HOP09932 586 aa7.02□□□□□ -1.29
HPR1YDR138W DCD1P06773 312 aa7.02□□□□□ -1.29
HPR1YDR138W TFC8Q12308 588 aa7.02□□□□□ -1.29
HPR1YDR138W RAM2P29703 316 aa7□□□□□ -1.29
HPR1YDR138W AI2P03876 854 aa6.96□□□□□ -1.3
HPR1YDR138W YPR148CQ06523 435 aa6.94□□□□□ -1.3
HPR1YDR138W RCR1P38212 213 aa6.93□□□□□ -1.3
HPR1YDR138W SET1P38827 1080 aaKnown RBP6.92□□□□□ -1.3
HPR1YDR138W CDC27P38042 758 aa6.89□□□□□ -1.31
HPR1YDR138W CKB1P43639 278 aa6.88□□□□□ -1.31
HPR1YDR138W VPS70P47161 811 aa6.88□□□□□ -1.31
HPR1YDR138W RLF2Q12495 606 aa6.87□□□□□ -1.31
HPR1YDR138W SPB4P25808 606 aaPredicted RBP6.87□□□□□ -1.31
HPR1YDR138W BCH2P36122 765 aa6.87□□□□□ -1.31
HPR1YDR138W DSF2P38213 736 aa6.82□□□□□ -1.32
HPR1YDR138W MRM1P25270 412 aa6.78□□□□□ -1.32
HPR1YDR138W KIN1P13185 1064 aa6.76□□□□□ -1.33
HPR1YDR138W MRPL32P25348 183 aa6.75□□□□□ -1.33
HPR1YDR138W PBS2P08018 668 aa6.74□□□□□ -1.33
HPR1YDR138W EPS1P40557 701 aa6.74□□□□□ -1.33
HPR1YDR138W MAK11P20484 414 aaKnown RBP6.73□□□□□ -1.33
HPR1YDR138W BBC1P47068 1157 aa6.73□□□□□ -1.33
HPR1YDR138W YNR021WP53723 404 aaKnown RBP6.71□□□□□ -1.33
HPR1YDR138W GLC3P32775 704 aa6.71□□□□□ -1.34
HPR1YDR138W BDF1P35817 686 aa6.71□□□□□ -1.34
HPR1YDR138W IFH1P39520 1085 aa6.71□□□□□ -1.34
HPR1YDR138W PRY3P47033 881 aa6.7□□□□□ -1.34
HPR1YDR138W NUP42P49686 430 aaKnown RBP6.7□□□□□ -1.34
HPR1YDR138W DIT2P21595 489 aa6.69□□□□□ -1.34
HPR1YDR138W GUA1P38625 525 aaKnown RBP6.68□□□□□ -1.34
HPR1YDR138W YCK3P39962 524 aa6.68□□□□□ -1.34
HPR1YDR138W RTG3P38165 486 aa6.67□□□□□ -1.34
HPR1YDR138W VPS29P38759 282 aa6.67□□□□□ -1.34
HPR1YDR138W COQ8P27697 501 aa6.65□□□□□ -1.34
HPR1YDR138W AIM7Q12156 149 aa6.65□□□□□ -1.35
HPR1YDR138W IES2P40154 320 aa6.63□□□□□ -1.35
HPR1YDR138W EDS1P38073 919 aa6.61□□□□□ -1.35
HPR1YDR138W MAM3Q12296 706 aa6.61□□□□□ -1.35
HPR1YDR138W STS1P38637 319 aa6.57□□□□□ -1.36
HPR1YDR138W REF2P42073 533 aaPredicted RBP6.56□□□□□ -1.36
HPR1YDR138W SCY1P53009 804 aa6.53□□□□□ -1.36
HPR1YDR138W TFB3Q03290 321 aa6.53□□□□□ -1.36
HPR1YDR138W YML020WQ03722 664 aa6.53□□□□□ -1.36
HPR1YDR138W NOP8Q08287 484 aaPredicted RBP6.53□□□□□ -1.36
HPR1YDR138W PKC1P24583 1151 aa6.52□□□□□ -1.37
HPR1YDR138W COX6P00427 148 aa6.52□□□□□ -1.37
HPR1YDR138W HPC2Q01448 625 aa6.51□□□□□ -1.37
HPR1YDR138W NOP53Q12080 455 aaKnown RBP6.51□□□□□ -1.37
HPR1YDR138W MIF2P35201 549 aa6.5□□□□□ -1.37
HPR1YDR138W YDR090CQ03193 310 aa6.5□□□□□ -1.37
HPR1YDR138W GLN1P32288 370 aaKnown RBP6.48□□□□□ -1.37
HPR1YDR138W SUB2Q07478 446 aaKnown RBP6.48□□□□□ -1.37
HPR1YDR138W MAK21Q12176 1025 aaKnown RBP6.47□□□□□ -1.37
HPR1YDR138W YFR006WP43590 535 aa6.47□□□□□ -1.37
HPR1YDR138W ORC1P54784 914 aaPredicted RBP6.46□□□□□ -1.38
HPR1YDR138W MAP2P38174 421 aaKnown RBP6.45□□□□□ -1.38
HPR1YDR138W YMR1P47147 688 aaKnown RBP RIP-Chip data6.45□□□□□ -1.38not detected
HPR1YDR138W PTC3P34221 468 aaKnown RBP6.45□□□□□ -1.38
HPR1YDR138W UBP14P38237 781 aaKnown RBP6.45□□□□□ -1.38
HPR1YDR138W DBP1P24784 617 aaKnown RBP6.44□□□□□ -1.38
HPR1YDR138W ATF2P53296 535 aa6.44□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms