RNA–Protein interactions for RNA: YHR100C

GEP4, Transcript of Mitochondrial phosphatidylglycerophosphatase (PGP phosphatase), yeastyeast

Gene GEP4, Length 558 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEP4YHR100C FAP1P53971 965 aa8.68□□□□□ -1.02
GEP4YHR100C MTC1P47018 478 aaKnown RBP8.31□□□□□ -1.08
GEP4YHR100C PRY3P47033 881 aa8.23□□□□□ -1.09
GEP4YHR100C DRS1P32892 752 aaKnown RBP7.86□□□□□ -1.15
GEP4YHR100C YCK3P39962 524 aa7.69□□□□□ -1.18
GEP4YHR100C HAA1Q12753 694 aaKnown RBP7.54□□□□□ -1.2
GEP4YHR100C AAD16Q02895 342 aa7.34□□□□□ -1.23
GEP4YHR100C PRI1P10363 409 aa7.15□□□□□ -1.26
GEP4YHR100C ISW2Q08773 1120 aa6.93□□□□□ -1.3
GEP4YHR100C BUD31P25337 157 aaPredicted RBP6.9□□□□□ -1.3
GEP4YHR100C RPG1P38249 964 aaKnown RBP6.88□□□□□ -1.31
GEP4YHR100C DIP2Q12220 943 aaPredicted RBP6.86□□□□□ -1.31
GEP4YHR100C TSR3Q12094 313 aaKnown RBP6.72□□□□□ -1.33
GEP4YHR100C YGL015CP33199 130 aa6.66□□□□□ -1.34
GEP4YHR100C RSE1Q04693 1361 aaKnown RBP6.62□□□□□ -1.35
GEP4YHR100C AVT3P36062 692 aa6.55□□□□□ -1.36
GEP4YHR100C BFR2Q06631 534 aaKnown RBP6.54□□□□□ -1.36
GEP4YHR100C REB1P21538 810 aa6.44□□□□□ -1.38
GEP4YHR100C RPL17AP05740 184 aaKnown RBP6.43□□□□□ -1.38
GEP4YHR100C SIS1P25294 352 aaKnown RBP6.43□□□□□ -1.38
GEP4YHR100C RPL17BP46990 184 aaKnown RBP6.43□□□□□ -1.38
GEP4YHR100C MRPL32P25348 183 aa6.42□□□□□ -1.38
GEP4YHR100C RQC2Q12532 1038 aaKnown RBP6.3□□□□□ -1.4
GEP4YHR100C SPT21P35209 758 aa6.05□□□□□ -1.44
GEP4YHR100C CDC27P38042 758 aa6.05□□□□□ -1.44
GEP4YHR100C YKR023WP36119 530 aaKnown RBP6.03□□□□□ -1.44
GEP4YHR100C HOP09932 586 aa5.98□□□□□ -1.45
GEP4YHR100C UBP9P39967 754 aa5.98□□□□□ -1.45
GEP4YHR100C DCD1P06773 312 aa5.97□□□□□ -1.45
GEP4YHR100C TAF7Q05021 590 aa5.95□□□□□ -1.46
GEP4YHR100C TFC8Q12308 588 aa5.9□□□□□ -1.46
GEP4YHR100C MAP2P38174 421 aaKnown RBP5.89□□□□□ -1.47
GEP4YHR100C RIM101P33400 625 aa5.87□□□□□ -1.47
GEP4YHR100C UBP10P53874 792 aaPredicted RBP5.83□□□□□ -1.48
GEP4YHR100C TFA1P36100 482 aa5.8□□□□□ -1.48
GEP4YHR100C SCY1P53009 804 aa5.79□□□□□ -1.48
GEP4YHR100C BCH2P36122 765 aa5.73□□□□□ -1.49
GEP4YHR100C SLX5P32828 619 aaKnown RBP5.7□□□□□ -1.5
GEP4YHR100C YIL055CP40523 627 aaKnown RBP5.7□□□□□ -1.5
GEP4YHR100C OXP1P28273 1286 aa5.69□□□□□ -1.5
GEP4YHR100C PTP3P40048 928 aa5.69□□□□□ -1.5
GEP4YHR100C TIF4632P39936 914 aaKnown RBP5.67□□□□□ -1.5
GEP4YHR100C YAH1Q12184 172 aaKnown RBP5.63□□□□□ -1.51
GEP4YHR100C TGL3P40308 642 aa5.59□□□□□ -1.51
GEP4YHR100C EPS1P40557 701 aa5.59□□□□□ -1.51
GEP4YHR100C BDF1P35817 686 aa5.57□□□□□ -1.52
GEP4YHR100C RSM7P47150 247 aa5.55□□□□□ -1.52
GEP4YHR100C BBC1P47068 1157 aa5.53□□□□□ -1.52
GEP4YHR100C AI2P03876 854 aa5.51□□□□□ -1.53
GEP4YHR100C URN1Q06525 465 aaKnown RBP5.47□□□□□ -1.53
GEP4YHR100C YLR271WQ06152 274 aa5.45□□□□□ -1.54
GEP4YHR100C YBL029C-AQ3E756 94 aa5.41□□□□□ -1.54
GEP4YHR100C SSP1P38871 571 aa5.39□□□□□ -1.55
GEP4YHR100C YOR238WQ08634 303 aa5.38□□□□□ -1.55
GEP4YHR100C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
GEP4YHR100C YJL171CP46992 396 aa5.36□□□□□ -1.55
GEP4YHR100C MRM1P25270 412 aa5.33□□□□□ -1.56
GEP4YHR100C YAP5P40574 245 aa5.33□□□□□ -1.56
GEP4YHR100C RGA2Q06407 1009 aa5.33□□□□□ -1.56
GEP4YHR100C PSD2P53037 1138 aaKnown RBP5.32□□□□□ -1.56
GEP4YHR100C MST1P07236 462 aa5.3□□□□□ -1.56
GEP4YHR100C PIB1Q06651 286 aa5.3□□□□□ -1.56
GEP4YHR100C WSC3Q12215 556 aa5.3□□□□□ -1.56
GEP4YHR100C GTT3P39996 337 aa5.28□□□□□ -1.56
GEP4YHR100C AIR2Q12476 344 aaKnown RBP5.28□□□□□ -1.56
GEP4YHR100C CST9Q06032 482 aa5.27□□□□□ -1.57
GEP4YHR100C NSR1P27476 414 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
GEP4YHR100C MGA2P40578 1113 aa5.25□□□□□ -1.57
GEP4YHR100C VNX1P42839 908 aa5.23□□□□□ -1.57
GEP4YHR100C SPP1Q03012 353 aa5.23□□□□□ -1.57
GEP4YHR100C LEO1P38439 464 aa5.21□□□□□ -1.58
GEP4YHR100C RTG3P38165 486 aa5.2□□□□□ -1.58
GEP4YHR100C YFR006WP43590 535 aa5.19□□□□□ -1.58
GEP4YHR100C YRB30P53107 440 aaPredicted RBP5.19□□□□□ -1.58
GEP4YHR100C DBP1P24784 617 aaKnown RBP5.17□□□□□ -1.58
GEP4YHR100C NAP1P25293 417 aaKnown RBP5.17□□□□□ -1.58
GEP4YHR100C SIS2P36024 562 aa5.16□□□□□ -1.58
GEP4YHR100C YMR1P47147 688 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
GEP4YHR100C AIM44Q99299 758 aa5.16□□□□□ -1.58
GEP4YHR100C RCR1P38212 213 aa5.15□□□□□ -1.59
GEP4YHR100C VPS29P38759 282 aa5.15□□□□□ -1.59
GEP4YHR100C FKH1P40466 484 aa5.15□□□□□ -1.59
GEP4YHR100C TIF11P38912 153 aaKnown RBP5.14□□□□□ -1.59
GEP4YHR100C ULI1P43604 169 aa5.12□□□□□ -1.59
GEP4YHR100C SET4P42948 560 aa5.11□□□□□ -1.59
GEP4YHR100C STS1P38637 319 aa5.1□□□□□ -1.59
GEP4YHR100C EBP2P36049 427 aaKnown RBP5.09□□□□□ -1.59
GEP4YHR100C BMT6Q12291 365 aa5.09□□□□□ -1.59
GEP4YHR100C LDB19Q12502 818 aa5.09□□□□□ -1.59
GEP4YHR100C VMA1P17255 1071 aaKnown RBP5.07□□□□□ -1.6
GEP4YHR100C CAB3P36076 571 aa5.07□□□□□ -1.6
GEP4YHR100C DMA1P38823 416 aa5.07□□□□□ -1.6
GEP4YHR100C YOL036WQ08206 761 aa5.07□□□□□ -1.6
GEP4YHR100C EAP1P36041 632 aaKnown RBP5.05□□□□□ -1.6
GEP4YHR100C YFR016CP43597 1233 aaKnown RBP5.04□□□□□ -1.6
GEP4YHR100C IOC4Q04213 475 aa5.04□□□□□ -1.6
GEP4YHR100C IOC2Q12072 812 aa5.04□□□□□ -1.6
GEP4YHR100C MSB4Q12317 492 aa5.04□□□□□ -1.6
GEP4YHR100C TRP5P00931 707 aaKnown RBP5.03□□□□□ -1.6
GEP4YHR100C RTG1P32607 177 aa5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms