RNA–Protein interactions for RNA: YMR054W

STV1, Transcript of Subunit a of the vacuolar-ATPase V0 domain, yeastyeast

Gene STV1, Length 2,673 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
STV1YMR054W DRS1P32892 752 aaKnown RBP9.16□□□□□ -0.94
STV1YMR054W TFA1P36100 482 aa8.56□□□□□ -1.04
STV1YMR054W BFR2Q06631 534 aaKnown RBP8.3□□□□□ -1.08
STV1YMR054W MTC1P47018 478 aaKnown RBP8.23□□□□□ -1.09
STV1YMR054W RQC2Q12532 1038 aaKnown RBP7.93□□□□□ -1.14
STV1YMR054W TAF7Q05021 590 aa7.82□□□□□ -1.16
STV1YMR054W AVT3P36062 692 aa7.75□□□□□ -1.17
STV1YMR054W DIP2Q12220 943 aaPredicted RBP7.49□□□□□ -1.21
STV1YMR054W DMA1P38823 416 aa7.39□□□□□ -1.23
STV1YMR054W LEO1P38439 464 aa7.21□□□□□ -1.26
STV1YMR054W LEU3P08638 886 aa6.84□□□□□ -1.31
STV1YMR054W PTP3P40048 928 aa6.81□□□□□ -1.32
STV1YMR054W ABP1P15891 592 aaKnown RBP6.8□□□□□ -1.32
STV1YMR054W SAS10Q12136 610 aaPredicted RBP6.76□□□□□ -1.33
STV1YMR054W RSE1Q04693 1361 aaKnown RBP6.74□□□□□ -1.33
STV1YMR054W DMA2P53924 522 aa6.69□□□□□ -1.34
STV1YMR054W IFH1P39520 1085 aa6.63□□□□□ -1.35
STV1YMR054W SSP1P38871 571 aa6.58□□□□□ -1.36
STV1YMR054W MON2P48563 1636 aaPredicted RBP6.53□□□□□ -1.36
STV1YMR054W RIM101P33400 625 aa6.52□□□□□ -1.37
STV1YMR054W RLF2Q12495 606 aa6.5□□□□□ -1.37
STV1YMR054W RPN1P38764 993 aaKnown RBP6.49□□□□□ -1.37
STV1YMR054W ORC1P54784 914 aaPredicted RBP6.48□□□□□ -1.37
STV1YMR054W RPL17AP05740 184 aaKnown RBP6.47□□□□□ -1.37
STV1YMR054W RPL17BP46990 184 aaKnown RBP6.47□□□□□ -1.37
STV1YMR054W IOC4Q04213 475 aa6.47□□□□□ -1.37
STV1YMR054W SPT21P35209 758 aa6.46□□□□□ -1.37
STV1YMR054W NAP1P25293 417 aaKnown RBP6.43□□□□□ -1.38
STV1YMR054W OXP1P28273 1286 aa6.4□□□□□ -1.38
STV1YMR054W CKB1P43639 278 aa6.36□□□□□ -1.39
STV1YMR054W YLR271WQ06152 274 aa6.36□□□□□ -1.39
STV1YMR054W ISW2Q08773 1120 aa6.35□□□□□ -1.39
STV1YMR054W RPG1P38249 964 aaKnown RBP6.32□□□□□ -1.4
STV1YMR054W YAH1Q12184 172 aaKnown RBP6.28□□□□□ -1.4
STV1YMR054W NOP8Q08287 484 aaPredicted RBP6.28□□□□□ -1.4
STV1YMR054W AIM44Q99299 758 aa6.27□□□□□ -1.41
STV1YMR054W YML020WQ03722 664 aa6.25□□□□□ -1.41
STV1YMR054W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
STV1YMR054W MGA2P40578 1113 aa6.24□□□□□ -1.41
STV1YMR054W CST9Q06032 482 aa6.23□□□□□ -1.41
STV1YMR054W INO80P53115 1489 aa6.22□□□□□ -1.41
STV1YMR054W REB1P21538 810 aa6.22□□□□□ -1.41
STV1YMR054W YPR148CQ06523 435 aa6.21□□□□□ -1.42
STV1YMR054W SPB4P25808 606 aaPredicted RBP6.17□□□□□ -1.42
STV1YMR054W KIN1P13185 1064 aa6.16□□□□□ -1.42
STV1YMR054W DSF2P38213 736 aa6.13□□□□□ -1.43
STV1YMR054W RAM2P29703 316 aa6.12□□□□□ -1.43
STV1YMR054W VPS70P47161 811 aa6.12□□□□□ -1.43
STV1YMR054W SET1P38827 1080 aaKnown RBP6.11□□□□□ -1.43
STV1YMR054W PRI1P10363 409 aa6.09□□□□□ -1.43
STV1YMR054W SLX8P40072 274 aa6.09□□□□□ -1.43
STV1YMR054W PSD2P53037 1138 aaKnown RBP6.09□□□□□ -1.43
STV1YMR054W YNR021WP53723 404 aaKnown RBP6.09□□□□□ -1.44
STV1YMR054W MAM3Q12296 706 aa6.09□□□□□ -1.44
STV1YMR054W URN1Q06525 465 aaKnown RBP6.08□□□□□ -1.44
STV1YMR054W GUA1P38625 525 aaKnown RBP6.07□□□□□ -1.44
STV1YMR054W RSM7P47150 247 aa6.07□□□□□ -1.44
STV1YMR054W YIL055CP40523 627 aaKnown RBP6.06□□□□□ -1.44
STV1YMR054W MRX12P47084 519 aa6.05□□□□□ -1.44
STV1YMR054W GLC3P32775 704 aa6.05□□□□□ -1.44
STV1YMR054W GEF1P37020 779 aa6.04□□□□□ -1.44
STV1YMR054W SUB2Q07478 446 aaKnown RBP6.04□□□□□ -1.44
STV1YMR054W KOG1P38873 1557 aa6.04□□□□□ -1.44
STV1YMR054W AIM7Q12156 149 aa6.03□□□□□ -1.44
STV1YMR054W SSA1P10591 642 aaKnown RBP6.02□□□□□ -1.44
STV1YMR054W YKR023WP36119 530 aaKnown RBP6.02□□□□□ -1.44
STV1YMR054W PBS2P08018 668 aa6.02□□□□□ -1.45
STV1YMR054W NUP42P49686 430 aaKnown RBP5.99□□□□□ -1.45
STV1YMR054W PAM1P37304 830 aaKnown RBP5.98□□□□□ -1.45
STV1YMR054W DIT2P21595 489 aa5.97□□□□□ -1.45
STV1YMR054W RCR1P38212 213 aa5.97□□□□□ -1.45
STV1YMR054W DNA2P38859 1522 aa5.95□□□□□ -1.46
STV1YMR054W ATG36P46983 293 aa5.94□□□□□ -1.46
STV1YMR054W HPC2Q01448 625 aa5.94□□□□□ -1.46
STV1YMR054W TFB3Q03290 321 aa5.94□□□□□ -1.46
STV1YMR054W TOP1P04786 769 aa5.94□□□□□ -1.46
STV1YMR054W IES2P40154 320 aa5.93□□□□□ -1.46
STV1YMR054W GLN1P32288 370 aaKnown RBP5.92□□□□□ -1.46
STV1YMR054W HGH1P48362 394 aaKnown RBP5.92□□□□□ -1.46
STV1YMR054W PKC1P24583 1151 aa5.92□□□□□ -1.46
STV1YMR054W AI2P03876 854 aa5.92□□□□□ -1.46
STV1YMR054W NOP7P53261 605 aaKnown RBP5.91□□□□□ -1.46
STV1YMR054W SEN54Q02825 467 aaPredicted RBP5.9□□□□□ -1.46
STV1YMR054W SNU71P53207 620 aaKnown RBP5.9□□□□□ -1.47
STV1YMR054W LAM6Q08001 693 aa5.88□□□□□ -1.47
STV1YMR054W RRN6P32786 894 aa5.87□□□□□ -1.47
STV1YMR054W SWR1Q05471 1514 aa5.87□□□□□ -1.47
STV1YMR054W YTA7P40340 1379 aa5.86□□□□□ -1.47
STV1YMR054W MAK11P20484 414 aaKnown RBP5.85□□□□□ -1.47
STV1YMR054W BIM1P40013 344 aa5.85□□□□□ -1.47
STV1YMR054W FAR11P53917 953 aa5.85□□□□□ -1.47
STV1YMR054W TFC8Q12308 588 aa5.85□□□□□ -1.47
STV1YMR054W SPC42P36094 363 aa5.85□□□□□ -1.47
STV1YMR054W OCA5P38738 679 aa5.85□□□□□ -1.47
STV1YMR054W ATG32P40458 529 aa5.85□□□□□ -1.47
STV1YMR054W MAK21Q12176 1025 aaKnown RBP5.85□□□□□ -1.47
STV1YMR054W HOP09932 586 aa5.83□□□□□ -1.48
STV1YMR054W BRL1P38770 471 aa5.83□□□□□ -1.48
STV1YMR054W SSF1P38789 453 aaPredicted RBP5.83□□□□□ -1.48
STV1YMR054W SWE1P32944 819 aa5.83□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms