RNA–Protein interactions for RNA: YPR029C

APL4, Transcript of Gamma-adaptin, yeastyeast

Gene APL4, Length 2,499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APL4YPR029C DRS1P32892 752 aaKnown RBP7.04□□□□□ -1.28
APL4YPR029C RQC2Q12532 1038 aaKnown RBP6.82□□□□□ -1.32
APL4YPR029C TFA1P36100 482 aa6.77□□□□□ -1.33
APL4YPR029C TAF7Q05021 590 aa6.64□□□□□ -1.35
APL4YPR029C BFR2Q06631 534 aaKnown RBP6.52□□□□□ -1.37
APL4YPR029C MTC1P47018 478 aaKnown RBP6.08□□□□□ -1.44
APL4YPR029C LEO1P38439 464 aa5.96□□□□□ -1.46
APL4YPR029C DMA1P38823 416 aa5.91□□□□□ -1.46
APL4YPR029C AVT3P36062 692 aa5.84□□□□□ -1.47
APL4YPR029C DIP2Q12220 943 aaPredicted RBP5.68□□□□□ -1.5
APL4YPR029C AIM44Q99299 758 aa5.65□□□□□ -1.5
APL4YPR029C URN1Q06525 465 aaKnown RBP5.62□□□□□ -1.51
APL4YPR029C NAP1P25293 417 aaKnown RBP5.58□□□□□ -1.52
APL4YPR029C LEU3P08638 886 aa5.52□□□□□ -1.53
APL4YPR029C IOC4Q04213 475 aa5.47□□□□□ -1.53
APL4YPR029C IFH1P39520 1085 aa5.45□□□□□ -1.54
APL4YPR029C YRB30P53107 440 aaPredicted RBP5.42□□□□□ -1.54
APL4YPR029C DMA2P53924 522 aa5.4□□□□□ -1.54
APL4YPR029C RLF2Q12495 606 aa5.38□□□□□ -1.55
APL4YPR029C ORC1P54784 914 aaPredicted RBP5.32□□□□□ -1.56
APL4YPR029C SAS10Q12136 610 aaPredicted RBP5.31□□□□□ -1.56
APL4YPR029C RPN1P38764 993 aaKnown RBP5.31□□□□□ -1.56
APL4YPR029C PTP3P40048 928 aa5.3□□□□□ -1.56
APL4YPR029C TOP1P04786 769 aa5.29□□□□□ -1.56
APL4YPR029C ABP1P15891 592 aaKnown RBP5.26□□□□□ -1.57
APL4YPR029C SNU71P53207 620 aaKnown RBP5.22□□□□□ -1.57
APL4YPR029C CKB1P43639 278 aa5.16□□□□□ -1.58
APL4YPR029C YML020WQ03722 664 aa5.14□□□□□ -1.59
APL4YPR029C BRL1P38770 471 aa5.13□□□□□ -1.59
APL4YPR029C RSE1Q04693 1361 aaKnown RBP5.12□□□□□ -1.59
APL4YPR029C NOP7P53261 605 aaKnown RBP5.12□□□□□ -1.59
APL4YPR029C MNN4P36044 1178 aa5.11□□□□□ -1.59
APL4YPR029C SSP1P38871 571 aa5.1□□□□□ -1.59
APL4YPR029C NOP8Q08287 484 aaPredicted RBP5.1□□□□□ -1.59
APL4YPR029C HGH1P48362 394 aaKnown RBP5.07□□□□□ -1.6
APL4YPR029C FAP1P53971 965 aa5.07□□□□□ -1.6
APL4YPR029C SUB1P54000 292 aaKnown RBP5.06□□□□□ -1.6
APL4YPR029C SIS2P36024 562 aa5.05□□□□□ -1.6
APL4YPR029C ASF1P32447 279 aa5.03□□□□□ -1.6
APL4YPR029C NUG1P40010 520 aaKnown RBP5.03□□□□□ -1.6
APL4YPR029C SLX8P40072 274 aa5.03□□□□□ -1.6
APL4YPR029C YFR016CP43597 1233 aaKnown RBP5.03□□□□□ -1.6
APL4YPR029C VPS72Q03388 795 aa5.03□□□□□ -1.6
APL4YPR029C KRI1P42846 591 aaKnown RBP5.02□□□□□ -1.61
APL4YPR029C SPB4P25808 606 aaPredicted RBP5□□□□□ -1.61
APL4YPR029C SWE1P32944 819 aa4.99□□□□□ -1.61
APL4YPR029C BRN1P38170 754 aa4.99□□□□□ -1.61
APL4YPR029C GIN4Q12263 1142 aa4.99□□□□□ -1.61
APL4YPR029C MDG1P53885 366 aa4.98□□□□□ -1.61
APL4YPR029C GEF1P37020 779 aa4.98□□□□□ -1.61
APL4YPR029C RTS3P53289 263 aa4.98□□□□□ -1.61
APL4YPR029C SSA1P10591 642 aaKnown RBP4.97□□□□□ -1.61
APL4YPR029C MET10P39692 1035 aa4.96□□□□□ -1.62
APL4YPR029C RPS0BP46654 252 aaKnown RBP4.96□□□□□ -1.62
APL4YPR029C ARP8Q12386 881 aaKnown RBP RIP-Chip data4.96□□□□□ -1.62not detected
APL4YPR029C DOS2P54858 310 aa4.94□□□□□ -1.62
APL4YPR029C SLD2P34252 453 aa4.94□□□□□ -1.62
APL4YPR029C OSW7P43611 510 aa4.94□□□□□ -1.62
APL4YPR029C FAR11P53917 953 aa4.94□□□□□ -1.62
APL4YPR029C YTA7P40340 1379 aa4.93□□□□□ -1.62
APL4YPR029C KIN1P13185 1064 aa4.92□□□□□ -1.62
APL4YPR029C ATG36P46983 293 aa4.92□□□□□ -1.62
APL4YPR029C MRX12P47084 519 aa4.91□□□□□ -1.62
APL4YPR029C NAB3P38996 802 aaKnown RBP RIP-Chip data4.91□□□□□ -1.62not detected
APL4YPR029C SPC42P36094 363 aa4.9□□□□□ -1.62
APL4YPR029C LAM6Q08001 693 aa4.89□□□□□ -1.63
APL4YPR029C PAM1P37304 830 aaKnown RBP4.89□□□□□ -1.63
APL4YPR029C RIM101P33400 625 aa4.88□□□□□ -1.63
APL4YPR029C YJR008WP47085 338 aa4.88□□□□□ -1.63
APL4YPR029C TPO2P53283 614 aa4.88□□□□□ -1.63
APL4YPR029C SUB2Q07478 446 aaKnown RBP4.87□□□□□ -1.63
APL4YPR029C SSF1P38789 453 aaPredicted RBP4.86□□□□□ -1.63
APL4YPR029C YNR021WP53723 404 aaKnown RBP4.86□□□□□ -1.63
APL4YPR029C RPL17AP05740 184 aaKnown RBP4.86□□□□□ -1.63
APL4YPR029C EBP2P36049 427 aaKnown RBP4.86□□□□□ -1.63
APL4YPR029C RPL17BP46990 184 aaKnown RBP4.86□□□□□ -1.63
APL4YPR029C MAM3Q12296 706 aa4.86□□□□□ -1.63
APL4YPR029C TOA1P32773 286 aa4.85□□□□□ -1.63
APL4YPR029C BUD21Q08492 214 aaPredicted RBP4.84□□□□□ -1.63
APL4YPR029C FPR4Q06205 392 aaPredicted RBP4.84□□□□□ -1.64
APL4YPR029C HIF1Q12373 385 aa4.84□□□□□ -1.64
APL4YPR029C VPS70P47161 811 aa4.83□□□□□ -1.64
APL4YPR029C RRN6P32786 894 aa4.83□□□□□ -1.64
APL4YPR029C YAF9P53930 226 aa4.83□□□□□ -1.64
APL4YPR029C HEM3P28789 327 aa4.82□□□□□ -1.64
APL4YPR029C OCA5P38738 679 aa4.82□□□□□ -1.64
APL4YPR029C MGA2P40578 1113 aa4.82□□□□□ -1.64
APL4YPR029C AIM7Q12156 149 aa4.82□□□□□ -1.64
APL4YPR029C PDR1P12383 1068 aa4.81□□□□□ -1.64
APL4YPR029C DSF2P38213 736 aa4.81□□□□□ -1.64
APL4YPR029C NMD2P38798 1089 aaKnown RBP4.81□□□□□ -1.64
APL4YPR029C YPR148CQ06523 435 aa4.81□□□□□ -1.64
APL4YPR029C YAH1Q12184 172 aaKnown RBP4.81□□□□□ -1.64
APL4YPR029C JSN1P47135 1091 aaKnown RBP RIP-Chip data4.81□□□□□ -1.64not detected
APL4YPR029C GUA1P38625 525 aaKnown RBP4.79□□□□□ -1.64
APL4YPR029C ZDS1P50111 915 aaKnown RBP4.79□□□□□ -1.64
APL4YPR029C CWC22P53333 577 aaKnown RBP4.79□□□□□ -1.64
APL4YPR029C KIP3P53086 805 aaKnown RBP4.78□□□□□ -1.64
APL4YPR029C HPC2Q01448 625 aa4.78□□□□□ -1.64
APL4YPR029C UBX5Q06682 500 aa4.78□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms