RNA–Protein interactions for RNA: YHR152W

SPO12, Transcript of Nucleolar protein of unknown function, yeastyeast

Gene SPO12, Length 522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO12YHR152W DRS1P32892 752 aaKnown RBP15.92■□□□□ 0.14
SPO12YHR152W MTC1P47018 478 aaKnown RBP15.49■□□□□ 0.07
SPO12YHR152W BFR2Q06631 534 aaKnown RBP13.94□□□□□ -0.18
SPO12YHR152W DIP2Q12220 943 aaPredicted RBP13.43□□□□□ -0.26
SPO12YHR152W TFA1P36100 482 aa13.41□□□□□ -0.26
SPO12YHR152W AVT3P36062 692 aa13.37□□□□□ -0.27
SPO12YHR152W RSE1Q04693 1361 aaKnown RBP12.57□□□□□ -0.4
SPO12YHR152W ISW2Q08773 1120 aa12.5□□□□□ -0.41
SPO12YHR152W RPG1P38249 964 aaKnown RBP12.32□□□□□ -0.44
SPO12YHR152W FAP1P53971 965 aa12.23□□□□□ -0.45
SPO12YHR152W PRI1P10363 409 aa12.22□□□□□ -0.45
SPO12YHR152W RPL17AP05740 184 aaKnown RBP12.08□□□□□ -0.48
SPO12YHR152W RPL17BP46990 184 aaKnown RBP12.08□□□□□ -0.48
SPO12YHR152W AAD16Q02895 342 aa11.96□□□□□ -0.49
SPO12YHR152W REB1P21538 810 aa11.87□□□□□ -0.51
SPO12YHR152W RQC2Q12532 1038 aaKnown RBP11.73□□□□□ -0.53
SPO12YHR152W SPT21P35209 758 aa11.69□□□□□ -0.54
SPO12YHR152W TSR3Q12094 313 aaKnown RBP11.62□□□□□ -0.55
SPO12YHR152W RIM101P33400 625 aa11.61□□□□□ -0.55
SPO12YHR152W PRY3P47033 881 aa11.46□□□□□ -0.57
SPO12YHR152W PTP3P40048 928 aa11.41□□□□□ -0.58
SPO12YHR152W OXP1P28273 1286 aa11.27□□□□□ -0.61
SPO12YHR152W SSP1P38871 571 aa11.25□□□□□ -0.61
SPO12YHR152W YKR023WP36119 530 aaKnown RBP11.22□□□□□ -0.61
SPO12YHR152W DMA1P38823 416 aa11.17□□□□□ -0.62
SPO12YHR152W MRPL32P25348 183 aa11.16□□□□□ -0.62
SPO12YHR152W YAH1Q12184 172 aaKnown RBP11.11□□□□□ -0.63
SPO12YHR152W YIL055CP40523 627 aaKnown RBP11.07□□□□□ -0.64
SPO12YHR152W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.02□□□□□ -0.65not detected
SPO12YHR152W YLR271WQ06152 274 aa11□□□□□ -0.65
SPO12YHR152W TFC8Q12308 588 aa10.99□□□□□ -0.65
SPO12YHR152W HOP09932 586 aa10.97□□□□□ -0.65
SPO12YHR152W RSM7P47150 247 aa10.92□□□□□ -0.66
SPO12YHR152W CDC27P38042 758 aa10.89□□□□□ -0.67
SPO12YHR152W YCK3P39962 524 aa10.89□□□□□ -0.67
SPO12YHR152W DCD1P06773 312 aa10.86□□□□□ -0.67
SPO12YHR152W HAA1Q12753 694 aaKnown RBP10.83□□□□□ -0.68
SPO12YHR152W MGA2P40578 1113 aa10.82□□□□□ -0.68
SPO12YHR152W AI2P03876 854 aa10.69□□□□□ -0.7
SPO12YHR152W PSD2P53037 1138 aaKnown RBP10.69□□□□□ -0.7
SPO12YHR152W CST9Q06032 482 aa10.69□□□□□ -0.7
SPO12YHR152W BCH2P36122 765 aa10.68□□□□□ -0.7
SPO12YHR152W BBC1P47068 1157 aa10.59□□□□□ -0.71
SPO12YHR152W EPS1P40557 701 aa10.52□□□□□ -0.73
SPO12YHR152W SAS10Q12136 610 aaPredicted RBP10.49□□□□□ -0.73
SPO12YHR152W BDF1P35817 686 aa10.44□□□□□ -0.74
SPO12YHR152W SCY1P53009 804 aa10.42□□□□□ -0.74
SPO12YHR152W MRM1P25270 412 aa10.38□□□□□ -0.75
SPO12YHR152W UBP10P53874 792 aaPredicted RBP10.38□□□□□ -0.75
SPO12YHR152W RAM2P29703 316 aa10.36□□□□□ -0.75
SPO12YHR152W MAP2P38174 421 aaKnown RBP10.36□□□□□ -0.75
SPO12YHR152W LEO1P38439 464 aa10.35□□□□□ -0.75
SPO12YHR152W RCR1P38212 213 aa10.3□□□□□ -0.76
SPO12YHR152W YGL015CP33199 130 aa10.29□□□□□ -0.76
SPO12YHR152W RTG3P38165 486 aa10.28□□□□□ -0.76
SPO12YHR152W LEU3P08638 886 aa10.27□□□□□ -0.77
SPO12YHR152W SET1P38827 1080 aaKnown RBP10.22□□□□□ -0.77
SPO12YHR152W SLX5P32828 619 aaKnown RBP10.2□□□□□ -0.78
SPO12YHR152W TAF7Q05021 590 aa10.2□□□□□ -0.78
SPO12YHR152W MAK11P20484 414 aaKnown RBP10.16□□□□□ -0.78
SPO12YHR152W VPS29P38759 282 aa10.15□□□□□ -0.78
SPO12YHR152W YPR148CQ06523 435 aa10.13□□□□□ -0.79
SPO12YHR152W IFH1P39520 1085 aa10.1□□□□□ -0.79
SPO12YHR152W CKB1P43639 278 aa10.07□□□□□ -0.8
SPO12YHR152W VPS70P47161 811 aa10.07□□□□□ -0.8
SPO12YHR152W YMR1P47147 688 aaKnown RBP RIP-Chip data10.03□□□□□ -0.8not detected
SPO12YHR152W COQ8P27697 501 aa10.02□□□□□ -0.81
SPO12YHR152W SPB4P25808 606 aaPredicted RBP9.99□□□□□ -0.81
SPO12YHR152W STS1P38637 319 aa9.99□□□□□ -0.81
SPO12YHR152W NOP53Q12080 455 aaKnown RBP9.97□□□□□ -0.81
SPO12YHR152W RPN1P38764 993 aaKnown RBP9.96□□□□□ -0.82
SPO12YHR152W DBP1P24784 617 aaKnown RBP9.95□□□□□ -0.82
SPO12YHR152W TIF4632P39936 914 aaKnown RBP9.94□□□□□ -0.82
SPO12YHR152W MIF2P35201 549 aa9.92□□□□□ -0.82
SPO12YHR152W EDS1P38073 919 aa9.92□□□□□ -0.82
SPO12YHR152W YFR006WP43590 535 aa9.92□□□□□ -0.82
SPO12YHR152W YOR238WQ08634 303 aa9.92□□□□□ -0.82
SPO12YHR152W NSR1P27476 414 aaKnown RBP RIP-Chip data9.91□□□□□ -0.82not detected
SPO12YHR152W DSF2P38213 736 aa9.87□□□□□ -0.83
SPO12YHR152W TGL3P40308 642 aa9.87□□□□□ -0.83
SPO12YHR152W PBS2P08018 668 aa9.85□□□□□ -0.83
SPO12YHR152W YAP5P40574 245 aa9.83□□□□□ -0.84
SPO12YHR152W PTC3P34221 468 aaKnown RBP9.81□□□□□ -0.84
SPO12YHR152W REF2P42073 533 aaPredicted RBP9.79□□□□□ -0.84
SPO12YHR152W PIB1Q06651 286 aa9.78□□□□□ -0.84
SPO12YHR152W VMA1P17255 1071 aaKnown RBP9.74□□□□□ -0.85
SPO12YHR152W MAM3Q12296 706 aa9.72□□□□□ -0.85
SPO12YHR152W YNR021WP53723 404 aaKnown RBP9.71□□□□□ -0.86
SPO12YHR152W MAK21Q12176 1025 aaKnown RBP9.69□□□□□ -0.86
SPO12YHR152W DMA2P53924 522 aa9.68□□□□□ -0.86
SPO12YHR152W IES2P40154 320 aa9.67□□□□□ -0.86
SPO12YHR152W COX6P00427 148 aa9.65□□□□□ -0.86
SPO12YHR152W MST1P07236 462 aa9.65□□□□□ -0.86
SPO12YHR152W SAM3Q08986 587 aa9.65□□□□□ -0.86
SPO12YHR152W GRE2Q12068 342 aaKnown RBP9.65□□□□□ -0.86
SPO12YHR152W ATH1P48016 1211 aa9.64□□□□□ -0.87
SPO12YHR152W NUP42P49686 430 aaKnown RBP9.64□□□□□ -0.87
SPO12YHR152W GUT1P32190 709 aa9.63□□□□□ -0.87
SPO12YHR152W KIN1P13185 1064 aa9.62□□□□□ -0.87
SPO12YHR152W DIT2P21595 489 aa9.61□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms