RNA–Protein interactions for RNA: YDL076C

RXT3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene RXT3, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RXT3YDL076C FAP1P53971 965 aa13.98□□□□□ -0.17
RXT3YDL076C MTC1P47018 478 aaKnown RBP13.85□□□□□ -0.19
RXT3YDL076C PRY3P47033 881 aa13.18□□□□□ -0.3
RXT3YDL076C AAD16Q02895 342 aa12.47□□□□□ -0.41
RXT3YDL076C PRI1P10363 409 aa12.37□□□□□ -0.43
RXT3YDL076C YCK3P39962 524 aa12.31□□□□□ -0.44
RXT3YDL076C HAA1Q12753 694 aaKnown RBP12.22□□□□□ -0.45
RXT3YDL076C ISW2Q08773 1120 aa11.78□□□□□ -0.52
RXT3YDL076C DRS1P32892 752 aaKnown RBP11.75□□□□□ -0.53
RXT3YDL076C RPG1P38249 964 aaKnown RBP11.7□□□□□ -0.54
RXT3YDL076C TSR3Q12094 313 aaKnown RBP11.69□□□□□ -0.54
RXT3YDL076C MRPL32P25348 183 aa11.21□□□□□ -0.61
RXT3YDL076C YGL015CP33199 130 aa11.07□□□□□ -0.64
RXT3YDL076C DIP2Q12220 943 aaPredicted RBP10.73□□□□□ -0.69
RXT3YDL076C RSE1Q04693 1361 aaKnown RBP10.71□□□□□ -0.69
RXT3YDL076C BUD31P25337 157 aaPredicted RBP10.68□□□□□ -0.7
RXT3YDL076C REB1P21538 810 aa10.57□□□□□ -0.72
RXT3YDL076C RPL17AP05740 184 aaKnown RBP10.48□□□□□ -0.73
RXT3YDL076C RPL17BP46990 184 aaKnown RBP10.48□□□□□ -0.73
RXT3YDL076C CDC27P38042 758 aa10.42□□□□□ -0.74
RXT3YDL076C MAP2P38174 421 aaKnown RBP10.25□□□□□ -0.77
RXT3YDL076C UBP10P53874 792 aaPredicted RBP10.24□□□□□ -0.77
RXT3YDL076C SIS1P25294 352 aaKnown RBP10.11□□□□□ -0.79
RXT3YDL076C YKR023WP36119 530 aaKnown RBP10.07□□□□□ -0.8
RXT3YDL076C DCD1P06773 312 aa9.94□□□□□ -0.82
RXT3YDL076C AVT3P36062 692 aa9.94□□□□□ -0.82
RXT3YDL076C HOP09932 586 aa9.92□□□□□ -0.82
RXT3YDL076C UBP9P39967 754 aa9.92□□□□□ -0.82
RXT3YDL076C SPT21P35209 758 aa9.88□□□□□ -0.83
RXT3YDL076C TIF4632P39936 914 aaKnown RBP9.88□□□□□ -0.83
RXT3YDL076C TFC8Q12308 588 aa9.86□□□□□ -0.83
RXT3YDL076C SCY1P53009 804 aa9.84□□□□□ -0.83
RXT3YDL076C TGL3P40308 642 aa9.8□□□□□ -0.84
RXT3YDL076C SLX5P32828 619 aaKnown RBP9.76□□□□□ -0.85
RXT3YDL076C BFR2Q06631 534 aaKnown RBP9.63□□□□□ -0.87
RXT3YDL076C BCH2P36122 765 aa9.51□□□□□ -0.89
RXT3YDL076C YBL029C-AQ3E756 94 aa9.37□□□□□ -0.91
RXT3YDL076C TFA1P36100 482 aa9.28□□□□□ -0.92
RXT3YDL076C RIM101P33400 625 aa9.24□□□□□ -0.93
RXT3YDL076C MST1P07236 462 aa9.21□□□□□ -0.94
RXT3YDL076C EPS1P40557 701 aa9.18□□□□□ -0.94
RXT3YDL076C YOR238WQ08634 303 aa9.18□□□□□ -0.94
RXT3YDL076C BDF1P35817 686 aa9.17□□□□□ -0.94
RXT3YDL076C VNX1P42839 908 aa9.16□□□□□ -0.94
RXT3YDL076C SPP1Q03012 353 aa9.12□□□□□ -0.95
RXT3YDL076C WSC3Q12215 556 aa9.06□□□□□ -0.96
RXT3YDL076C YJL171CP46992 396 aa9.05□□□□□ -0.96
RXT3YDL076C AIR2Q12476 344 aaKnown RBP9.01□□□□□ -0.97
RXT3YDL076C NSR1P27476 414 aaKnown RBP RIP-Chip data8.96□□□□□ -0.98not detected
RXT3YDL076C YAP5P40574 245 aa8.95□□□□□ -0.98
RXT3YDL076C FKH1P40466 484 aa8.94□□□□□ -0.98
RXT3YDL076C OXP1P28273 1286 aa8.91□□□□□ -0.98
RXT3YDL076C PTP3P40048 928 aa8.91□□□□□ -0.98
RXT3YDL076C TIF11P38912 153 aaKnown RBP8.9□□□□□ -0.98
RXT3YDL076C INO80P53115 1489 aa8.86□□□□□ -0.99
RXT3YDL076C GTT3P39996 337 aa8.83□□□□□ -1
RXT3YDL076C YIL055CP40523 627 aaKnown RBP8.83□□□□□ -1
RXT3YDL076C LDB19Q12502 818 aa8.82□□□□□ -1
RXT3YDL076C BBC1P47068 1157 aa8.81□□□□□ -1
RXT3YDL076C BMT6Q12291 365 aa8.8□□□□□ -1
RXT3YDL076C MON2P48563 1636 aaPredicted RBP8.75□□□□□ -1.01
RXT3YDL076C ULI1P43604 169 aa8.73□□□□□ -1.01
RXT3YDL076C AI2P03876 854 aa8.71□□□□□ -1.02
RXT3YDL076C IOC2Q12072 812 aa8.69□□□□□ -1.02
RXT3YDL076C RSM7P47150 247 aa8.67□□□□□ -1.02
RXT3YDL076C PIB1Q06651 286 aa8.64□□□□□ -1.03
RXT3YDL076C YAH1Q12184 172 aaKnown RBP8.57□□□□□ -1.04
RXT3YDL076C RTG1P32607 177 aa8.52□□□□□ -1.05
RXT3YDL076C MSB4Q12317 492 aa8.5□□□□□ -1.05
RXT3YDL076C EAP1P36041 632 aaKnown RBP8.49□□□□□ -1.05
RXT3YDL076C NCR1Q12200 1170 aa8.49□□□□□ -1.05
RXT3YDL076C TRP5P00931 707 aaKnown RBP8.45□□□□□ -1.06
RXT3YDL076C SET4P42948 560 aa8.45□□□□□ -1.06
RXT3YDL076C YOL036WQ08206 761 aa8.41□□□□□ -1.06
RXT3YDL076C RQC2Q12532 1038 aaKnown RBP8.39□□□□□ -1.07
RXT3YDL076C YNL035CP53962 389 aaKnown RBP8.38□□□□□ -1.07
RXT3YDL076C SEC61P32915 480 aa8.37□□□□□ -1.07
RXT3YDL076C TCB3Q03640 1545 aaKnown RBP8.37□□□□□ -1.07
RXT3YDL076C DNA2P38859 1522 aa8.35□□□□□ -1.07
RXT3YDL076C MRM1P25270 412 aa8.35□□□□□ -1.07
RXT3YDL076C SWR1Q05471 1514 aa8.34□□□□□ -1.08
RXT3YDL076C BCK2P33306 851 aa8.33□□□□□ -1.08
RXT3YDL076C TFG1P41895 735 aaPredicted RBP8.32□□□□□ -1.08
RXT3YDL076C KOG1P38873 1557 aa8.31□□□□□ -1.08
RXT3YDL076C PSD2P53037 1138 aaKnown RBP8.3□□□□□ -1.08
RXT3YDL076C YLR271WQ06152 274 aa8.3□□□□□ -1.08
RXT3YDL076C SAP30P38429 201 aa8.29□□□□□ -1.08
RXT3YDL076C TY1B-DR4Q07793 1604 aa8.22□□□□□ -1.09
RXT3YDL076C DBP1P24784 617 aaKnown RBP8.22□□□□□ -1.09
RXT3YDL076C YFR006WP43590 535 aa8.22□□□□□ -1.09
RXT3YDL076C CHL1P22516 861 aaPredicted RBP8.21□□□□□ -1.1
RXT3YDL076C YMR1P47147 688 aaKnown RBP RIP-Chip data8.21□□□□□ -1.1not detected
RXT3YDL076C SGS1P35187 1447 aa8.2□□□□□ -1.1
RXT3YDL076C VMA1P17255 1071 aaKnown RBP8.19□□□□□ -1.1
RXT3YDL076C YDL129WQ07555 291 aa8.16□□□□□ -1.1
RXT3YDL076C PRE3P38624 215 aa8.15□□□□□ -1.1
RXT3YDL076C DAN4P47179 1161 aa8.15□□□□□ -1.1
RXT3YDL076C SAM3Q08986 587 aa8.14□□□□□ -1.11
RXT3YDL076C VPS29P38759 282 aa8.13□□□□□ -1.11
RXT3YDL076C STS1P38637 319 aa8.12□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms