RNA–Protein interactions for RNA: YLR007W

NSE1, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene NSE1, Length 1,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSE1YLR007W MTC1P47018 478 aaKnown RBP15.32■□□□□ 0.04
NSE1YLR007W DRS1P32892 752 aaKnown RBP14.38□□□□□ -0.11
NSE1YLR007W FAP1P53971 965 aa13.72□□□□□ -0.21
NSE1YLR007W PRY3P47033 881 aa12.89□□□□□ -0.35
NSE1YLR007W PRI1P10363 409 aa12.88□□□□□ -0.35
NSE1YLR007W AAD16Q02895 342 aa12.77□□□□□ -0.37
NSE1YLR007W ISW2Q08773 1120 aa12.65□□□□□ -0.38
NSE1YLR007W DIP2Q12220 943 aaPredicted RBP12.57□□□□□ -0.4
NSE1YLR007W RPG1P38249 964 aaKnown RBP12.55□□□□□ -0.4
NSE1YLR007W YCK3P39962 524 aa12.23□□□□□ -0.45
NSE1YLR007W TSR3Q12094 313 aaKnown RBP12.19□□□□□ -0.46
NSE1YLR007W AVT3P36062 692 aa12.15□□□□□ -0.46
NSE1YLR007W BFR2Q06631 534 aaKnown RBP12.13□□□□□ -0.47
NSE1YLR007W RSE1Q04693 1361 aaKnown RBP12.12□□□□□ -0.47
NSE1YLR007W HAA1Q12753 694 aaKnown RBP12.05□□□□□ -0.48
NSE1YLR007W RPL17AP05740 184 aaKnown RBP11.76□□□□□ -0.53
NSE1YLR007W RPL17BP46990 184 aaKnown RBP11.76□□□□□ -0.53
NSE1YLR007W REB1P21538 810 aa11.68□□□□□ -0.54
NSE1YLR007W MRPL32P25348 183 aa11.67□□□□□ -0.54
NSE1YLR007W TFA1P36100 482 aa11.48□□□□□ -0.57
NSE1YLR007W SPT21P35209 758 aa11.26□□□□□ -0.61
NSE1YLR007W YGL015CP33199 130 aa11.16□□□□□ -0.62
NSE1YLR007W CDC27P38042 758 aa11.15□□□□□ -0.62
NSE1YLR007W YKR023WP36119 530 aaKnown RBP11.14□□□□□ -0.63
NSE1YLR007W HOP09932 586 aa10.92□□□□□ -0.66
NSE1YLR007W DCD1P06773 312 aa10.89□□□□□ -0.67
NSE1YLR007W TFC8Q12308 588 aa10.89□□□□□ -0.67
NSE1YLR007W RIM101P33400 625 aa10.87□□□□□ -0.67
NSE1YLR007W MAP2P38174 421 aaKnown RBP10.79□□□□□ -0.68
NSE1YLR007W UBP10P53874 792 aaPredicted RBP10.77□□□□□ -0.69
NSE1YLR007W SCY1P53009 804 aa10.58□□□□□ -0.72
NSE1YLR007W BCH2P36122 765 aa10.54□□□□□ -0.72
NSE1YLR007W OXP1P28273 1286 aa10.53□□□□□ -0.72
NSE1YLR007W SLX5P32828 619 aaKnown RBP10.41□□□□□ -0.74
NSE1YLR007W PTP3P40048 928 aa10.34□□□□□ -0.75
NSE1YLR007W YIL055CP40523 627 aaKnown RBP10.33□□□□□ -0.76
NSE1YLR007W TIF4632P39936 914 aaKnown RBP10.31□□□□□ -0.76
NSE1YLR007W EPS1P40557 701 aa10.29□□□□□ -0.76
NSE1YLR007W TGL3P40308 642 aa10.27□□□□□ -0.77
NSE1YLR007W BDF1P35817 686 aa10.24□□□□□ -0.77
NSE1YLR007W YAH1Q12184 172 aaKnown RBP10.23□□□□□ -0.77
NSE1YLR007W BUD31P25337 157 aaPredicted RBP10.21□□□□□ -0.77
NSE1YLR007W RSM7P47150 247 aa10.19□□□□□ -0.78
NSE1YLR007W AI2P03876 854 aa10.11□□□□□ -0.79
NSE1YLR007W BBC1P47068 1157 aa10.07□□□□□ -0.8
NSE1YLR007W YLR271WQ06152 274 aa10.06□□□□□ -0.8
NSE1YLR007W SSP1P38871 571 aa9.92□□□□□ -0.82
NSE1YLR007W UBP9P39967 754 aa9.91□□□□□ -0.82
NSE1YLR007W PSD2P53037 1138 aaKnown RBP9.89□□□□□ -0.83
NSE1YLR007W MST1P07236 462 aa9.86□□□□□ -0.83
NSE1YLR007W NSR1P27476 414 aaKnown RBP RIP-Chip data9.84□□□□□ -0.83not detected
NSE1YLR007W YOR238WQ08634 303 aa9.83□□□□□ -0.84
NSE1YLR007W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.83□□□□□ -0.84not detected
NSE1YLR007W YAP5P40574 245 aa9.78□□□□□ -0.84
NSE1YLR007W MRM1P25270 412 aa9.75□□□□□ -0.85
NSE1YLR007W SIS1P25294 352 aaKnown RBP9.73□□□□□ -0.85
NSE1YLR007W YBL029C-AQ3E756 94 aa9.73□□□□□ -0.85
NSE1YLR007W CST9Q06032 482 aa9.72□□□□□ -0.85
NSE1YLR007W MGA2P40578 1113 aa9.66□□□□□ -0.86
NSE1YLR007W PIB1Q06651 286 aa9.62□□□□□ -0.87
NSE1YLR007W VNX1P42839 908 aa9.61□□□□□ -0.87
NSE1YLR007W WSC3Q12215 556 aa9.59□□□□□ -0.87
NSE1YLR007W DMA1P38823 416 aa9.58□□□□□ -0.88
NSE1YLR007W GTT3P39996 337 aa9.56□□□□□ -0.88
NSE1YLR007W VPS29P38759 282 aa9.53□□□□□ -0.88
NSE1YLR007W RTG3P38165 486 aa9.52□□□□□ -0.89
NSE1YLR007W SPP1Q03012 353 aa9.52□□□□□ -0.89
NSE1YLR007W RCR1P38212 213 aa9.5□□□□□ -0.89
NSE1YLR007W YMR1P47147 688 aaKnown RBP RIP-Chip data9.49□□□□□ -0.89not detected
NSE1YLR007W RQC2Q12532 1038 aaKnown RBP9.48□□□□□ -0.89
NSE1YLR007W DBP1P24784 617 aaKnown RBP9.46□□□□□ -0.9
NSE1YLR007W YFR006WP43590 535 aa9.46□□□□□ -0.9
NSE1YLR007W STS1P38637 319 aa9.44□□□□□ -0.9
NSE1YLR007W TIF11P38912 153 aaKnown RBP9.44□□□□□ -0.9
NSE1YLR007W VMA1P17255 1071 aaKnown RBP9.35□□□□□ -0.91
NSE1YLR007W ULI1P43604 169 aa9.34□□□□□ -0.91
NSE1YLR007W YOL036WQ08206 761 aa9.33□□□□□ -0.92
NSE1YLR007W SET4P42948 560 aa9.32□□□□□ -0.92
NSE1YLR007W IOC2Q12072 812 aa9.31□□□□□ -0.92
NSE1YLR007W MSB4Q12317 492 aa9.31□□□□□ -0.92
NSE1YLR007W LDB19Q12502 818 aa9.31□□□□□ -0.92
NSE1YLR007W FKH1P40466 484 aa9.3□□□□□ -0.92
NSE1YLR007W AIR2Q12476 344 aaKnown RBP9.29□□□□□ -0.92
NSE1YLR007W SAM3Q08986 587 aa9.26□□□□□ -0.93
NSE1YLR007W EAP1P36041 632 aaKnown RBP9.24□□□□□ -0.93
NSE1YLR007W TRP5P00931 707 aaKnown RBP9.22□□□□□ -0.93
NSE1YLR007W RAM2P29703 316 aa9.21□□□□□ -0.94
NSE1YLR007W RTG1P32607 177 aa9.16□□□□□ -0.94
NSE1YLR007W YJL171CP46992 396 aa9.16□□□□□ -0.94
NSE1YLR007W GYP5Q12344 894 aa9.15□□□□□ -0.94
NSE1YLR007W MAK11P20484 414 aaKnown RBP9.14□□□□□ -0.95
NSE1YLR007W YNL035CP53962 389 aaKnown RBP9.1□□□□□ -0.95
NSE1YLR007W MIF2P35201 549 aa9.09□□□□□ -0.95
NSE1YLR007W DCW1P36091 449 aa9.09□□□□□ -0.95
NSE1YLR007W EDS1P38073 919 aa9.08□□□□□ -0.96
NSE1YLR007W ABP1P15891 592 aaKnown RBP9.07□□□□□ -0.96
NSE1YLR007W BMT6Q12291 365 aa9.07□□□□□ -0.96
NSE1YLR007W HTA1P04911 132 aaKnown RBP9.06□□□□□ -0.96
NSE1YLR007W HTA2P04912 132 aa9.06□□□□□ -0.96
NSE1YLR007W NCR1Q12200 1170 aa9.06□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms