RNA–Protein interactions for RNA: YFL049W

SWP82, Transcript of Member of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWP82, Length 1,872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWP82YFL049W MTC1P47018 478 aaKnown RBP10.01□□□□□ -0.81
SWP82YFL049W DRS1P32892 752 aaKnown RBP9.93□□□□□ -0.82
SWP82YFL049W BFR2Q06631 534 aaKnown RBP8.52□□□□□ -1.05
SWP82YFL049W DIP2Q12220 943 aaPredicted RBP8.49□□□□□ -1.05
SWP82YFL049W AVT3P36062 692 aa8.39□□□□□ -1.07
SWP82YFL049W FAP1P53971 965 aa8.29□□□□□ -1.08
SWP82YFL049W PRI1P10363 409 aa8.11□□□□□ -1.11
SWP82YFL049W ISW2Q08773 1120 aa8.11□□□□□ -1.11
SWP82YFL049W TFA1P36100 482 aa8.1□□□□□ -1.11
SWP82YFL049W RPG1P38249 964 aaKnown RBP8.05□□□□□ -1.12
SWP82YFL049W RSE1Q04693 1361 aaKnown RBP8.01□□□□□ -1.13
SWP82YFL049W AAD16Q02895 342 aa7.94□□□□□ -1.14
SWP82YFL049W PRY3P47033 881 aa7.79□□□□□ -1.16
SWP82YFL049W RPL17AP05740 184 aaKnown RBP7.75□□□□□ -1.17
SWP82YFL049W RPL17BP46990 184 aaKnown RBP7.75□□□□□ -1.17
SWP82YFL049W TSR3Q12094 313 aaKnown RBP7.7□□□□□ -1.18
SWP82YFL049W RQC2Q12532 1038 aaKnown RBP7.67□□□□□ -1.18
SWP82YFL049W REB1P21538 810 aa7.62□□□□□ -1.19
SWP82YFL049W TAF7Q05021 590 aa7.57□□□□□ -1.2
SWP82YFL049W SPT21P35209 758 aa7.51□□□□□ -1.21
SWP82YFL049W YCK3P39962 524 aa7.51□□□□□ -1.21
SWP82YFL049W RIM101P33400 625 aa7.35□□□□□ -1.23
SWP82YFL049W MRPL32P25348 183 aa7.33□□□□□ -1.24
SWP82YFL049W HAA1Q12753 694 aaKnown RBP7.3□□□□□ -1.24
SWP82YFL049W YKR023WP36119 530 aaKnown RBP7.29□□□□□ -1.24
SWP82YFL049W CDC27P38042 758 aa7.17□□□□□ -1.26
SWP82YFL049W OXP1P28273 1286 aa7.16□□□□□ -1.26
SWP82YFL049W HOP09932 586 aa7.13□□□□□ -1.27
SWP82YFL049W TFC8Q12308 588 aa7.12□□□□□ -1.27
SWP82YFL049W DCD1P06773 312 aa7.11□□□□□ -1.27
SWP82YFL049W DMA1P38823 416 aa7.1□□□□□ -1.27
SWP82YFL049W PTP3P40048 928 aa7.02□□□□□ -1.29
SWP82YFL049W YAH1Q12184 172 aaKnown RBP6.98□□□□□ -1.29
SWP82YFL049W SSP1P38871 571 aa6.95□□□□□ -1.3
SWP82YFL049W YIL055CP40523 627 aaKnown RBP6.94□□□□□ -1.3
SWP82YFL049W YLR271WQ06152 274 aa6.92□□□□□ -1.3
SWP82YFL049W BCH2P36122 765 aa6.92□□□□□ -1.3
SWP82YFL049W LEO1P38439 464 aa6.92□□□□□ -1.3
SWP82YFL049W RSM7P47150 247 aa6.88□□□□□ -1.31
SWP82YFL049W YGL015CP33199 130 aa6.85□□□□□ -1.31
SWP82YFL049W MAP2P38174 421 aaKnown RBP6.85□□□□□ -1.31
SWP82YFL049W UBP10P53874 792 aaPredicted RBP6.81□□□□□ -1.32
SWP82YFL049W SCY1P53009 804 aa6.8□□□□□ -1.32
SWP82YFL049W AI2P03876 854 aa6.79□□□□□ -1.32
SWP82YFL049W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
SWP82YFL049W EPS1P40557 701 aa6.77□□□□□ -1.33
SWP82YFL049W PSD2P53037 1138 aaKnown RBP6.75□□□□□ -1.33
SWP82YFL049W BDF1P35817 686 aa6.74□□□□□ -1.33
SWP82YFL049W CST9Q06032 482 aa6.73□□□□□ -1.33
SWP82YFL049W MGA2P40578 1113 aa6.7□□□□□ -1.34
SWP82YFL049W BBC1P47068 1157 aa6.69□□□□□ -1.34
SWP82YFL049W SLX5P32828 619 aaKnown RBP6.65□□□□□ -1.34
SWP82YFL049W MRM1P25270 412 aa6.58□□□□□ -1.36
SWP82YFL049W RCR1P38212 213 aa6.52□□□□□ -1.37
SWP82YFL049W TIF4632P39936 914 aaKnown RBP6.48□□□□□ -1.37
SWP82YFL049W TGL3P40308 642 aa6.47□□□□□ -1.37
SWP82YFL049W LEU3P08638 886 aa6.47□□□□□ -1.37
SWP82YFL049W ABP1P15891 592 aaKnown RBP6.45□□□□□ -1.38
SWP82YFL049W RAM2P29703 316 aa6.45□□□□□ -1.38
SWP82YFL049W DMA2P53924 522 aa6.45□□□□□ -1.38
SWP82YFL049W RTG3P38165 486 aa6.45□□□□□ -1.38
SWP82YFL049W VPS29P38759 282 aa6.45□□□□□ -1.38
SWP82YFL049W BUD31P25337 157 aaPredicted RBP6.4□□□□□ -1.39
SWP82YFL049W NSR1P27476 414 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
SWP82YFL049W STS1P38637 319 aa6.36□□□□□ -1.39
SWP82YFL049W SAS10Q12136 610 aaPredicted RBP6.36□□□□□ -1.39
SWP82YFL049W IFH1P39520 1085 aa6.34□□□□□ -1.39
SWP82YFL049W YFR006WP43590 535 aa6.34□□□□□ -1.39
SWP82YFL049W YMR1P47147 688 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
SWP82YFL049W YOR238WQ08634 303 aa6.34□□□□□ -1.39
SWP82YFL049W YAP5P40574 245 aa6.33□□□□□ -1.4
SWP82YFL049W DBP1P24784 617 aaKnown RBP6.32□□□□□ -1.4
SWP82YFL049W PIB1Q06651 286 aa6.32□□□□□ -1.4
SWP82YFL049W MAK11P20484 414 aaKnown RBP6.32□□□□□ -1.4
SWP82YFL049W MST1P07236 462 aa6.31□□□□□ -1.4
SWP82YFL049W IOC4Q04213 475 aa6.28□□□□□ -1.4
SWP82YFL049W COQ8P27697 501 aa6.24□□□□□ -1.41
SWP82YFL049W EDS1P38073 919 aa6.24□□□□□ -1.41
SWP82YFL049W SET1P38827 1080 aaKnown RBP6.24□□□□□ -1.41
SWP82YFL049W NAP1P25293 417 aaKnown RBP6.24□□□□□ -1.41
SWP82YFL049W RLF2Q12495 606 aa6.24□□□□□ -1.41
SWP82YFL049W VMA1P17255 1071 aaKnown RBP6.22□□□□□ -1.41
SWP82YFL049W MIF2P35201 549 aa6.2□□□□□ -1.42
SWP82YFL049W RPN1P38764 993 aaKnown RBP6.19□□□□□ -1.42
SWP82YFL049W ORC1P54784 914 aaPredicted RBP6.17□□□□□ -1.42
SWP82YFL049W PTC3P34221 468 aaKnown RBP6.16□□□□□ -1.42
SWP82YFL049W YPR148CQ06523 435 aa6.15□□□□□ -1.42
SWP82YFL049W SAM3Q08986 587 aa6.15□□□□□ -1.42
SWP82YFL049W GTT3P39996 337 aa6.14□□□□□ -1.43
SWP82YFL049W AIM44Q99299 758 aa6.13□□□□□ -1.43
SWP82YFL049W YBL029C-AQ3E756 94 aa6.12□□□□□ -1.43
SWP82YFL049W NOP53Q12080 455 aaKnown RBP6.11□□□□□ -1.43
SWP82YFL049W YOL036WQ08206 761 aa6.11□□□□□ -1.43
SWP82YFL049W WSC3Q12215 556 aa6.11□□□□□ -1.43
SWP82YFL049W VPS70P47161 811 aa6.09□□□□□ -1.43
SWP82YFL049W SET4P42948 560 aa6.09□□□□□ -1.44
SWP82YFL049W VNX1P42839 908 aa6.08□□□□□ -1.44
SWP82YFL049W URN1Q06525 465 aaKnown RBP6.07□□□□□ -1.44
SWP82YFL049W GRE2Q12068 342 aaKnown RBP6.07□□□□□ -1.44
SWP82YFL049W GYP5Q12344 894 aa6.07□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 8 ms