RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeastyeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPA1YER049W DRS1P32892 752 aaKnown RBP9.57□□□□□ -0.88
TPA1YER049W MTC1P47018 478 aaKnown RBP9.32□□□□□ -0.92
TPA1YER049W BFR2Q06631 534 aaKnown RBP8.37□□□□□ -1.07
TPA1YER049W DIP2Q12220 943 aaPredicted RBP8.07□□□□□ -1.12
TPA1YER049W AVT3P36062 692 aa8.06□□□□□ -1.12
TPA1YER049W TFA1P36100 482 aa8.04□□□□□ -1.12
TPA1YER049W RSE1Q04693 1361 aaKnown RBP7.54□□□□□ -1.2
TPA1YER049W ISW2Q08773 1120 aa7.49□□□□□ -1.21
TPA1YER049W RPG1P38249 964 aaKnown RBP7.4□□□□□ -1.22
TPA1YER049W PRI1P10363 409 aa7.35□□□□□ -1.23
TPA1YER049W FAP1P53971 965 aa7.35□□□□□ -1.23
TPA1YER049W RPL17AP05740 184 aaKnown RBP7.26□□□□□ -1.25
TPA1YER049W RPL17BP46990 184 aaKnown RBP7.26□□□□□ -1.25
TPA1YER049W AAD16Q02895 342 aa7.17□□□□□ -1.26
TPA1YER049W REB1P21538 810 aa7.13□□□□□ -1.27
TPA1YER049W SPT21P35209 758 aa7.06□□□□□ -1.28
TPA1YER049W TSR3Q12094 313 aaKnown RBP6.99□□□□□ -1.29
TPA1YER049W RIM101P33400 625 aa6.98□□□□□ -1.29
TPA1YER049W RQC2Q12532 1038 aaKnown RBP6.95□□□□□ -1.3
TPA1YER049W SGS1P35187 1447 aa6.89□□□□□ -1.31
TPA1YER049W PRY3P47033 881 aa6.88□□□□□ -1.31
TPA1YER049W PTP3P40048 928 aa6.86□□□□□ -1.31
TPA1YER049W SPA2P23201 1466 aaKnown RBP6.82□□□□□ -1.32
TPA1YER049W OXP1P28273 1286 aa6.79□□□□□ -1.32
TPA1YER049W YKR023WP36119 530 aaKnown RBP6.76□□□□□ -1.33
TPA1YER049W SSP1P38871 571 aa6.75□□□□□ -1.33
TPA1YER049W INO80P53115 1489 aa6.73□□□□□ -1.33
TPA1YER049W SSN2P38931 1420 aa6.71□□□□□ -1.33
TPA1YER049W DMA1P38823 416 aa6.7□□□□□ -1.34
TPA1YER049W YAH1Q12184 172 aaKnown RBP6.68□□□□□ -1.34
TPA1YER049W MRPL32P25348 183 aa6.68□□□□□ -1.34
TPA1YER049W YLR271WQ06152 274 aa6.63□□□□□ -1.35
TPA1YER049W HOP09932 586 aa6.61□□□□□ -1.35
TPA1YER049W YCK3P39962 524 aa6.61□□□□□ -1.35
TPA1YER049W YIL055CP40523 627 aaKnown RBP6.61□□□□□ -1.35
TPA1YER049W TFC8Q12308 588 aa6.61□□□□□ -1.35
TPA1YER049W DCD1P06773 312 aa6.58□□□□□ -1.36
TPA1YER049W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36not detected
TPA1YER049W CDC27P38042 758 aa6.57□□□□□ -1.36
TPA1YER049W RSM7P47150 247 aa6.54□□□□□ -1.36
TPA1YER049W TCB3Q03640 1545 aaKnown RBP6.53□□□□□ -1.36
TPA1YER049W MGA2P40578 1113 aa6.48□□□□□ -1.37
TPA1YER049W HAA1Q12753 694 aaKnown RBP6.48□□□□□ -1.37
TPA1YER049W TY1B-DR4Q07793 1604 aa6.47□□□□□ -1.37
TPA1YER049W CST9Q06032 482 aa6.46□□□□□ -1.38
TPA1YER049W BCH2P36122 765 aa6.43□□□□□ -1.38
TPA1YER049W PSD2P53037 1138 aaKnown RBP6.43□□□□□ -1.38
TPA1YER049W AI2P03876 854 aa6.42□□□□□ -1.38
TPA1YER049W HSL1P34244 1518 aa6.36□□□□□ -1.39
TPA1YER049W EPS1P40557 701 aa6.34□□□□□ -1.39
TPA1YER049W BBC1P47068 1157 aa6.33□□□□□ -1.4
TPA1YER049W SPT6P23615 1451 aaKnown RBP6.31□□□□□ -1.4
TPA1YER049W SKI3P17883 1432 aaKnown RBP6.3□□□□□ -1.4
TPA1YER049W SAS10Q12136 610 aaPredicted RBP6.29□□□□□ -1.4
TPA1YER049W BDF1P35817 686 aa6.29□□□□□ -1.4
TPA1YER049W SCY1P53009 804 aa6.27□□□□□ -1.41
TPA1YER049W HIR3P47171 1648 aa6.26□□□□□ -1.41
TPA1YER049W MRM1P25270 412 aa6.25□□□□□ -1.41
TPA1YER049W RAM2P29703 316 aa6.25□□□□□ -1.41
TPA1YER049W MAP2P38174 421 aaKnown RBP6.25□□□□□ -1.41
TPA1YER049W UBP10P53874 792 aaPredicted RBP6.23□□□□□ -1.41
TPA1YER049W RCR1P38212 213 aa6.23□□□□□ -1.41
TPA1YER049W XRN1P22147 1528 aaKnown RBP6.22□□□□□ -1.41
TPA1YER049W CHD1P32657 1468 aa6.21□□□□□ -1.42
TPA1YER049W SIN3P22579 1536 aa6.2□□□□□ -1.42
TPA1YER049W THO2P53552 1597 aaKnown RBP6.19□□□□□ -1.42
TPA1YER049W MON2P48563 1636 aaPredicted RBP6.19□□□□□ -1.42
TPA1YER049W REV3P14284 1504 aa6.18□□□□□ -1.42
TPA1YER049W SWR1Q05471 1514 aa6.16□□□□□ -1.42
TPA1YER049W SSK2P53599 1579 aa6.16□□□□□ -1.42
TPA1YER049W YGL015CP33199 130 aa6.15□□□□□ -1.42
TPA1YER049W RTG3P38165 486 aa6.15□□□□□ -1.42
TPA1YER049W LEO1P38439 464 aa6.15□□□□□ -1.42
TPA1YER049W LEU3P08638 886 aa6.15□□□□□ -1.43
TPA1YER049W MMS22Q06164 1454 aa6.14□□□□□ -1.43
TPA1YER049W SLX5P32828 619 aaKnown RBP6.12□□□□□ -1.43
TPA1YER049W SET1P38827 1080 aaKnown RBP6.12□□□□□ -1.43
TPA1YER049W MAK11P20484 414 aaKnown RBP6.1□□□□□ -1.43
TPA1YER049W VPS29P38759 282 aa6.1□□□□□ -1.43
TPA1YER049W ESP1Q03018 1630 aa6.09□□□□□ -1.43
TPA1YER049W YPR148CQ06523 435 aa6.09□□□□□ -1.44
TPA1YER049W MYO2P19524 1574 aaKnown RBP6.08□□□□□ -1.44
TPA1YER049W TAF7Q05021 590 aa6.08□□□□□ -1.44
TPA1YER049W STU1P38198 1513 aa6.04□□□□□ -1.44
TPA1YER049W POL1P13382 1468 aa6.03□□□□□ -1.44
TPA1YER049W VPS70P47161 811 aa6.03□□□□□ -1.44
TPA1YER049W TAF2P23255 1407 aa6.03□□□□□ -1.44
TPA1YER049W STS1P38637 319 aa6.02□□□□□ -1.45
TPA1YER049W COQ8P27697 501 aa6.01□□□□□ -1.45
TPA1YER049W YMR1P47147 688 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
TPA1YER049W IFH1P39520 1085 aa6.01□□□□□ -1.45
TPA1YER049W CKB1P43639 278 aa5.99□□□□□ -1.45
TPA1YER049W YTA7P40340 1379 aa5.98□□□□□ -1.45
TPA1YER049W UFD4P33202 1483 aa5.98□□□□□ -1.45
TPA1YER049W YPK9Q12697 1472 aa5.98□□□□□ -1.45
TPA1YER049W EDS1P38073 919 aa5.97□□□□□ -1.45
TPA1YER049W YFR006WP43590 535 aa5.97□□□□□ -1.45
TPA1YER049W ATG2P53855 1592 aa5.97□□□□□ -1.45
TPA1YER049W DBP1P24784 617 aaKnown RBP5.97□□□□□ -1.45
TPA1YER049W ECM5Q03214 1411 aa5.96□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms