RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeastyeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE1YBL031W MTC1P47018 478 aaKnown RBP15.79■□□□□ 0.12
SHE1YBL031W FAP1P53971 965 aa15.1■□□□□ 0.01
SHE1YBL031W DRS1P32892 752 aaKnown RBP14.21□□□□□ -0.13
SHE1YBL031W PRY3P47033 881 aa14.18□□□□□ -0.14
SHE1YBL031W AAD16Q02895 342 aa13.69□□□□□ -0.22
SHE1YBL031W PRI1P10363 409 aa13.67□□□□□ -0.22
SHE1YBL031W ISW2Q08773 1120 aa13.29□□□□□ -0.28
SHE1YBL031W YCK3P39962 524 aa13.2□□□□□ -0.3
SHE1YBL031W RPG1P38249 964 aaKnown RBP13.18□□□□□ -0.3
SHE1YBL031W HAA1Q12753 694 aaKnown RBP13.18□□□□□ -0.3
SHE1YBL031W TSR3Q12094 313 aaKnown RBP12.96□□□□□ -0.33
SHE1YBL031W DIP2Q12220 943 aaPredicted RBP12.66□□□□□ -0.38
SHE1YBL031W MRPL32P25348 183 aa12.45□□□□□ -0.42
SHE1YBL031W RSE1Q04693 1361 aaKnown RBP12.41□□□□□ -0.42
SHE1YBL031W REB1P21538 810 aa12.13□□□□□ -0.47
SHE1YBL031W YGL015CP33199 130 aa12.09□□□□□ -0.47
SHE1YBL031W RPL17AP05740 184 aaKnown RBP12.08□□□□□ -0.48
SHE1YBL031W RPL17BP46990 184 aaKnown RBP12.08□□□□□ -0.48
SHE1YBL031W AVT3P36062 692 aa11.94□□□□□ -0.5
SHE1YBL031W CDC27P38042 758 aa11.66□□□□□ -0.54
SHE1YBL031W BFR2Q06631 534 aaKnown RBP11.51□□□□□ -0.57
SHE1YBL031W YKR023WP36119 530 aaKnown RBP11.46□□□□□ -0.57
SHE1YBL031W SPT21P35209 758 aa11.4□□□□□ -0.58
SHE1YBL031W MAP2P38174 421 aaKnown RBP11.4□□□□□ -0.58
SHE1YBL031W UBP10P53874 792 aaPredicted RBP11.37□□□□□ -0.59
SHE1YBL031W HOP09932 586 aa11.31□□□□□ -0.6
SHE1YBL031W BUD31P25337 157 aaPredicted RBP11.31□□□□□ -0.6
SHE1YBL031W DCD1P06773 312 aa11.3□□□□□ -0.6
SHE1YBL031W TFC8Q12308 588 aa11.23□□□□□ -0.61
SHE1YBL031W SCY1P53009 804 aa11.08□□□□□ -0.64
SHE1YBL031W TIF4632P39936 914 aaKnown RBP10.99□□□□□ -0.65
SHE1YBL031W SLX5P32828 619 aaKnown RBP10.95□□□□□ -0.66
SHE1YBL031W TGL3P40308 642 aa10.89□□□□□ -0.67
SHE1YBL031W RIM101P33400 625 aa10.88□□□□□ -0.67
SHE1YBL031W BCH2P36122 765 aa10.86□□□□□ -0.67
SHE1YBL031W SIS1P25294 352 aaKnown RBP10.81□□□□□ -0.68
SHE1YBL031W UBP9P39967 754 aa10.81□□□□□ -0.68
SHE1YBL031W EPS1P40557 701 aa10.55□□□□□ -0.72
SHE1YBL031W OXP1P28273 1286 aa10.52□□□□□ -0.73
SHE1YBL031W BDF1P35817 686 aa10.52□□□□□ -0.73
SHE1YBL031W PTP3P40048 928 aa10.5□□□□□ -0.73
SHE1YBL031W YIL055CP40523 627 aaKnown RBP10.47□□□□□ -0.73
SHE1YBL031W TFA1P36100 482 aa10.44□□□□□ -0.74
SHE1YBL031W YBL029C-AQ3E756 94 aa10.36□□□□□ -0.75
SHE1YBL031W YOR238WQ08634 303 aa10.33□□□□□ -0.76
SHE1YBL031W MST1P07236 462 aa10.29□□□□□ -0.76
SHE1YBL031W BBC1P47068 1157 aa10.29□□□□□ -0.76
SHE1YBL031W YAH1Q12184 172 aaKnown RBP10.25□□□□□ -0.77
SHE1YBL031W RSM7P47150 247 aa10.24□□□□□ -0.77
SHE1YBL031W AI2P03876 854 aa10.21□□□□□ -0.77
SHE1YBL031W YAP5P40574 245 aa10.17□□□□□ -0.78
SHE1YBL031W VNX1P42839 908 aa10.17□□□□□ -0.78
SHE1YBL031W WSC3Q12215 556 aa10.16□□□□□ -0.78
SHE1YBL031W SPP1Q03012 353 aa10.14□□□□□ -0.79
SHE1YBL031W NSR1P27476 414 aaKnown RBP RIP-Chip data10.13□□□□□ -0.79not detected
SHE1YBL031W GTT3P39996 337 aa10.03□□□□□ -0.8
SHE1YBL031W TIF11P38912 153 aaKnown RBP9.95□□□□□ -0.82
SHE1YBL031W YJL171CP46992 396 aa9.95□□□□□ -0.82
SHE1YBL031W YLR271WQ06152 274 aa9.94□□□□□ -0.82
SHE1YBL031W PIB1Q06651 286 aa9.94□□□□□ -0.82
SHE1YBL031W AIR2Q12476 344 aaKnown RBP9.89□□□□□ -0.83
SHE1YBL031W MRM1P25270 412 aa9.84□□□□□ -0.83
SHE1YBL031W FKH1P40466 484 aa9.84□□□□□ -0.83
SHE1YBL031W LDB19Q12502 818 aa9.84□□□□□ -0.83
SHE1YBL031W ULI1P43604 169 aa9.83□□□□□ -0.84
SHE1YBL031W PSD2P53037 1138 aaKnown RBP9.82□□□□□ -0.84
SHE1YBL031W IOC2Q12072 812 aa9.73□□□□□ -0.85
SHE1YBL031W BMT6Q12291 365 aa9.72□□□□□ -0.85
SHE1YBL031W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.7□□□□□ -0.86not detected
SHE1YBL031W SSP1P38871 571 aa9.66□□□□□ -0.86
SHE1YBL031W SET4P42948 560 aa9.66□□□□□ -0.86
SHE1YBL031W EAP1P36041 632 aaKnown RBP9.65□□□□□ -0.86
SHE1YBL031W MSB4Q12317 492 aa9.65□□□□□ -0.86
SHE1YBL031W YFR006WP43590 535 aa9.61□□□□□ -0.87
SHE1YBL031W YMR1P47147 688 aaKnown RBP RIP-Chip data9.61□□□□□ -0.87not detected
SHE1YBL031W YOL036WQ08206 761 aa9.61□□□□□ -0.87
SHE1YBL031W DBP1P24784 617 aaKnown RBP9.6□□□□□ -0.87
SHE1YBL031W RTG1P32607 177 aa9.6□□□□□ -0.87
SHE1YBL031W TRP5P00931 707 aaKnown RBP9.58□□□□□ -0.88
SHE1YBL031W CST9Q06032 482 aa9.57□□□□□ -0.88
SHE1YBL031W RTG3P38165 486 aa9.56□□□□□ -0.88
SHE1YBL031W VPS29P38759 282 aa9.55□□□□□ -0.88
SHE1YBL031W NCR1Q12200 1170 aa9.55□□□□□ -0.88
SHE1YBL031W VMA1P17255 1071 aaKnown RBP9.5□□□□□ -0.89
SHE1YBL031W STS1P38637 319 aa9.49□□□□□ -0.89
SHE1YBL031W MGA2P40578 1113 aa9.49□□□□□ -0.89
SHE1YBL031W YNL035CP53962 389 aaKnown RBP9.49□□□□□ -0.89
SHE1YBL031W SEC61P32915 480 aa9.45□□□□□ -0.9
SHE1YBL031W TFG1P41895 735 aaPredicted RBP9.44□□□□□ -0.9
SHE1YBL031W RCR1P38212 213 aa9.41□□□□□ -0.9
SHE1YBL031W SAM3Q08986 587 aa9.4□□□□□ -0.9
SHE1YBL031W SAP30P38429 201 aa9.35□□□□□ -0.91
SHE1YBL031W GYP5Q12344 894 aa9.34□□□□□ -0.91
SHE1YBL031W DCW1P36091 449 aa9.3□□□□□ -0.92
SHE1YBL031W JIP4Q03361 876 aa9.29□□□□□ -0.92
SHE1YBL031W HTA1P04911 132 aaKnown RBP9.28□□□□□ -0.92
SHE1YBL031W HTA2P04912 132 aa9.28□□□□□ -0.92
SHE1YBL031W DAN4P47179 1161 aa9.28□□□□□ -0.92
SHE1YBL031W ABP1P15891 592 aaKnown RBP9.26□□□□□ -0.93
SHE1YBL031W RQC2Q12532 1038 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms