RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W MTC1P47018 478 aaKnown RBP15.22■□□□□ 0.03
DEG1YFL001W FAP1P53971 965 aa15.07■□□□□ 0
DEG1YFL001W PRY3P47033 881 aa14.22□□□□□ -0.13
DEG1YFL001W AAD16Q02895 342 aa13.6□□□□□ -0.23
DEG1YFL001W PRI1P10363 409 aa13.54□□□□□ -0.24
DEG1YFL001W YCK3P39962 524 aa13.48□□□□□ -0.25
DEG1YFL001W HAA1Q12753 694 aaKnown RBP13.24□□□□□ -0.29
DEG1YFL001W DRS1P32892 752 aaKnown RBP13.07□□□□□ -0.32
DEG1YFL001W ISW2Q08773 1120 aa12.86□□□□□ -0.35
DEG1YFL001W RPG1P38249 964 aaKnown RBP12.82□□□□□ -0.36
DEG1YFL001W TSR3Q12094 313 aaKnown RBP12.75□□□□□ -0.37
DEG1YFL001W MRPL32P25348 183 aa12.21□□□□□ -0.45
DEG1YFL001W YGL015CP33199 130 aa12.05□□□□□ -0.48
DEG1YFL001W DIP2Q12220 943 aaPredicted RBP11.86□□□□□ -0.51
DEG1YFL001W RSE1Q04693 1361 aaKnown RBP11.79□□□□□ -0.52
DEG1YFL001W BUD31P25337 157 aaPredicted RBP11.58□□□□□ -0.56
DEG1YFL001W REB1P21538 810 aa11.54□□□□□ -0.56
DEG1YFL001W RPL17AP05740 184 aaKnown RBP11.51□□□□□ -0.57
DEG1YFL001W RPL17BP46990 184 aaKnown RBP11.51□□□□□ -0.57
DEG1YFL001W BFR2Q06631 534 aaKnown RBP11.47□□□□□ -0.57
DEG1YFL001W CDC27P38042 758 aa11.44□□□□□ -0.58
DEG1YFL001W TFA1P36100 482 aa11.27□□□□□ -0.61
DEG1YFL001W MAP2P38174 421 aaKnown RBP11.21□□□□□ -0.61
DEG1YFL001W UBP10P53874 792 aaPredicted RBP11.18□□□□□ -0.62
DEG1YFL001W AVT3P36062 692 aa11.13□□□□□ -0.63
DEG1YFL001W YKR023WP36119 530 aaKnown RBP11.11□□□□□ -0.63
DEG1YFL001W SPT21P35209 758 aa10.93□□□□□ -0.66
DEG1YFL001W SIS1P25294 352 aaKnown RBP10.9□□□□□ -0.66
DEG1YFL001W DCD1P06773 312 aa10.89□□□□□ -0.67
DEG1YFL001W HOP09932 586 aa10.89□□□□□ -0.67
DEG1YFL001W TFC8Q12308 588 aa10.86□□□□□ -0.67
DEG1YFL001W SCY1P53009 804 aa10.76□□□□□ -0.69
DEG1YFL001W UBP9P39967 754 aa10.74□□□□□ -0.69
DEG1YFL001W TGL3P40308 642 aa10.74□□□□□ -0.69
DEG1YFL001W TIF4632P39936 914 aaKnown RBP10.72□□□□□ -0.69
DEG1YFL001W SLX5P32828 619 aaKnown RBP10.65□□□□□ -0.7
DEG1YFL001W BCH2P36122 765 aa10.47□□□□□ -0.73
DEG1YFL001W RIM101P33400 625 aa10.29□□□□□ -0.76
DEG1YFL001W RQC2Q12532 1038 aaKnown RBP10.21□□□□□ -0.78
DEG1YFL001W YBL029C-AQ3E756 94 aa10.19□□□□□ -0.78
DEG1YFL001W MST1P07236 462 aa10.16□□□□□ -0.78
DEG1YFL001W EPS1P40557 701 aa10.11□□□□□ -0.79
DEG1YFL001W BDF1P35817 686 aa10.1□□□□□ -0.79
DEG1YFL001W YOR238WQ08634 303 aa10.05□□□□□ -0.8
DEG1YFL001W VNX1P42839 908 aa10.04□□□□□ -0.8
DEG1YFL001W OXP1P28273 1286 aa9.94□□□□□ -0.82
DEG1YFL001W SPP1Q03012 353 aa9.91□□□□□ -0.82
DEG1YFL001W NSR1P27476 414 aaKnown RBP RIP-Chip data9.86□□□□□ -0.83not detected
DEG1YFL001W WSC3Q12215 556 aa9.86□□□□□ -0.83
DEG1YFL001W AIR2Q12476 344 aaKnown RBP9.86□□□□□ -0.83
DEG1YFL001W YAP5P40574 245 aa9.8□□□□□ -0.84
DEG1YFL001W YJL171CP46992 396 aa9.78□□□□□ -0.84
DEG1YFL001W PTP3P40048 928 aa9.77□□□□□ -0.85
DEG1YFL001W FKH1P40466 484 aa9.77□□□□□ -0.85
DEG1YFL001W TIF11P38912 153 aaKnown RBP9.74□□□□□ -0.85
DEG1YFL001W YIL055CP40523 627 aaKnown RBP9.74□□□□□ -0.85
DEG1YFL001W BBC1P47068 1157 aa9.68□□□□□ -0.86
DEG1YFL001W AI2P03876 854 aa9.62□□□□□ -0.87
DEG1YFL001W RSM7P47150 247 aa9.61□□□□□ -0.87
DEG1YFL001W GTT3P39996 337 aa9.6□□□□□ -0.87
DEG1YFL001W LDB19Q12502 818 aa9.6□□□□□ -0.87
DEG1YFL001W IOC2Q12072 812 aa9.56□□□□□ -0.88
DEG1YFL001W BMT6Q12291 365 aa9.56□□□□□ -0.88
DEG1YFL001W ULI1P43604 169 aa9.56□□□□□ -0.88
DEG1YFL001W DMA1P38823 416 aa9.49□□□□□ -0.89
DEG1YFL001W PIB1Q06651 286 aa9.47□□□□□ -0.89
DEG1YFL001W YAH1Q12184 172 aaKnown RBP9.45□□□□□ -0.9
DEG1YFL001W RTG1P32607 177 aa9.33□□□□□ -0.92
DEG1YFL001W MSB4Q12317 492 aa9.32□□□□□ -0.92
DEG1YFL001W EAP1P36041 632 aaKnown RBP9.3□□□□□ -0.92
DEG1YFL001W NCR1Q12200 1170 aa9.3□□□□□ -0.92
DEG1YFL001W TRP5P00931 707 aaKnown RBP9.27□□□□□ -0.93
DEG1YFL001W SET4P42948 560 aa9.25□□□□□ -0.93
DEG1YFL001W YLR271WQ06152 274 aa9.25□□□□□ -0.93
DEG1YFL001W YOL036WQ08206 761 aa9.25□□□□□ -0.93
DEG1YFL001W PSD2P53037 1138 aaKnown RBP9.23□□□□□ -0.93
DEG1YFL001W MRM1P25270 412 aa9.22□□□□□ -0.93
DEG1YFL001W SSP1P38871 571 aa9.2□□□□□ -0.94
DEG1YFL001W TAF7Q05021 590 aa9.2□□□□□ -0.94
DEG1YFL001W YNL035CP53962 389 aaKnown RBP9.19□□□□□ -0.94
DEG1YFL001W SEC61P32915 480 aa9.17□□□□□ -0.94
DEG1YFL001W DBP1P24784 617 aaKnown RBP9.07□□□□□ -0.96
DEG1YFL001W YFR006WP43590 535 aa9.06□□□□□ -0.96
DEG1YFL001W YMR1P47147 688 aaKnown RBP RIP-Chip data9.06□□□□□ -0.96not detected
DEG1YFL001W BCK2P33306 851 aa9.05□□□□□ -0.96
DEG1YFL001W VPS29P38759 282 aa9.05□□□□□ -0.96
DEG1YFL001W VMA1P17255 1071 aaKnown RBP9.05□□□□□ -0.96
DEG1YFL001W SAP30P38429 201 aa9.05□□□□□ -0.96
DEG1YFL001W TFG1P41895 735 aaPredicted RBP9.04□□□□□ -0.96
DEG1YFL001W DAN4P47179 1161 aa9.02□□□□□ -0.97
DEG1YFL001W SAM3Q08986 587 aa9.02□□□□□ -0.97
DEG1YFL001W LEO1P38439 464 aa9.01□□□□□ -0.97
DEG1YFL001W STS1P38637 319 aa8.99□□□□□ -0.97
DEG1YFL001W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.99□□□□□ -0.97not detected
DEG1YFL001W CHL1P22516 861 aaPredicted RBP8.98□□□□□ -0.97
DEG1YFL001W RTG3P38165 486 aa8.94□□□□□ -0.98
DEG1YFL001W YDL129WQ07555 291 aa8.94□□□□□ -0.98
DEG1YFL001W JIP4Q03361 876 aa8.93□□□□□ -0.98
DEG1YFL001W PRE3P38624 215 aa8.92□□□□□ -0.98
DEG1YFL001W ABP1P15891 592 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 105.5 ms