Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC30.49■■■□□ 2.47
USP6P35125 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
USP6P35125 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC30.49■■■□□ 2.47
USP6P35125 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
USP6P35125 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
USP6P35125 CREM-210ENST00000374721 2020 ntTSL 5 BASIC30.49■■■□□ 2.47
USP6P35125 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
USP6P35125 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
USP6P35125 ME3-201ENST00000323418 1068 ntTSL 5 BASIC30.48■■■□□ 2.47
USP6P35125 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
USP6P35125 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
USP6P35125 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
USP6P35125 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
USP6P35125 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC30.48■■■□□ 2.47
USP6P35125 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
USP6P35125 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
USP6P35125 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
USP6P35125 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC30.47■■■□□ 2.47
USP6P35125 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC30.47■■■□□ 2.47
USP6P35125 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
USP6P35125 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
USP6P35125 LINC02228-203ENST00000641970 1355 ntBASIC30.47■■■□□ 2.47
USP6P35125 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC30.47■■■□□ 2.47
USP6P35125 STX4-202ENST00000394998 1498 ntTSL 2 BASIC30.47■■■□□ 2.47
USP6P35125 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC30.47■■■□□ 2.47
USP6P35125 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC30.47■■■□□ 2.47
USP6P35125 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC30.47■■■□□ 2.47
USP6P35125 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
USP6P35125 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC30.47■■■□□ 2.47
USP6P35125 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC30.47■■■□□ 2.47
USP6P35125 KRT18P61-201ENST00000585825 1298 ntBASIC30.47■■■□□ 2.47
USP6P35125 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC30.46■■■□□ 2.47
USP6P35125 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
USP6P35125 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
USP6P35125 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
USP6P35125 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC30.46■■■□□ 2.47
USP6P35125 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
USP6P35125 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
USP6P35125 NT5C3AP1-201ENST00000394500 1012 ntBASIC30.46■■■□□ 2.47
USP6P35125 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
USP6P35125 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
USP6P35125 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.46
USP6P35125 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC30.45■■■□□ 2.46
USP6P35125 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC30.45■■■□□ 2.46
USP6P35125 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.46
USP6P35125 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC30.45■■■□□ 2.46
USP6P35125 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
USP6P35125 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
USP6P35125 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
USP6P35125 MPST-204ENST00000404393 1329 ntTSL 5 BASIC30.44■■■□□ 2.46
USP6P35125 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
USP6P35125 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
USP6P35125 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
USP6P35125 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC30.44■■■□□ 2.46
USP6P35125 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
USP6P35125 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC30.44■■■□□ 2.46
USP6P35125 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC30.44■■■□□ 2.46
USP6P35125 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC30.44■■■□□ 2.46
USP6P35125 DLX3-202ENST00000512495 834 ntTSL 2 BASIC30.44■■■□□ 2.46
USP6P35125 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC30.44■■■□□ 2.46
USP6P35125 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC30.44■■■□□ 2.46
USP6P35125 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC30.44■■■□□ 2.46
USP6P35125 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC30.43■■■□□ 2.46
USP6P35125 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC30.43■■■□□ 2.46
USP6P35125 NTF6G-201ENST00000591094 616 ntBASIC30.43■■■□□ 2.46
USP6P35125 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
USP6P35125 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC30.43■■■□□ 2.46
USP6P35125 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC30.43■■■□□ 2.46
USP6P35125 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
USP6P35125 AC004911.1-201ENST00000416316 871 ntBASIC30.42■■■□□ 2.46
USP6P35125 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
USP6P35125 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
USP6P35125 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
USP6P35125 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC30.41■■■□□ 2.46
USP6P35125 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
USP6P35125 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
USP6P35125 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC30.41■■■□□ 2.46
USP6P35125 AC105233.4-201ENST00000642045 216 ntBASIC30.41■■■□□ 2.46
USP6P35125 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
USP6P35125 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC30.41■■■□□ 2.46
USP6P35125 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC30.41■■■□□ 2.46
USP6P35125 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
USP6P35125 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC30.4■■■□□ 2.46
USP6P35125 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC30.4■■■□□ 2.46
USP6P35125 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
USP6P35125 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
USP6P35125 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC30.4■■■□□ 2.46
USP6P35125 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
USP6P35125 TPRG1LP1-201ENST00000598702 760 ntBASIC30.39■■■□□ 2.46
USP6P35125 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.45
USP6P35125 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC30.39■■■□□ 2.45
USP6P35125 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC30.39■■■□□ 2.45
USP6P35125 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC30.39■■■□□ 2.45
USP6P35125 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC30.38■■■□□ 2.45
USP6P35125 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC30.38■■■□□ 2.45
USP6P35125 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC30.38■■■□□ 2.45
USP6P35125 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
USP6P35125 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
USP6P35125 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC30.38■■■□□ 2.45
USP6P35125 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms