RNA–Protein interactions for RNA: ENST00000429199.6

PGAP3-204, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2 BASIC

Gene PGAP3, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-204ENST00000429199 NISCHQ9Y2I1 1504 aa52.96■■■■■ 6.07
PGAP3-204ENST00000429199 CCDC180Q9P1Z9 1646 aa47.27■■■■■ 5.16
PGAP3-204ENST00000429199 ABCC9O60706 1549 aa46.69■■■■■ 5.06
PGAP3-204ENST00000429199 RB1CC1Q8TDY2 1594 aa44.65■■■■■ 4.74
PGAP3-204ENST00000429199 NACADO15069 1562 aa44.49■■■■■ 4.71
PGAP3-204ENST00000429199 DCAF8L2P0C7V8 631 aa44.24■■■■■ 4.67
PGAP3-204ENST00000429199 MYO15BQ96JP2 1530 aa44.09■■■■■ 4.65
PGAP3-204ENST00000429199 ZCCHC6Q5VYS8 1495 aaKnown RBP44.07■■■■■ 4.65
PGAP3-204ENST00000429199 UNC13AQ9UPW8 1703 aa43.79■■■■■ 4.6
PGAP3-204ENST00000429199 DCAF1Q9Y4B6 1507 aa43.76■■■■■ 4.6
PGAP3-204ENST00000429199 PABPN1Q86U42 306 aaKnown RBP eCLIP43.52■■■■■ 4.56
PGAP3-204ENST00000429199 BICRAQ9NZM4 1560 aa43.47■■■■■ 4.55
PGAP3-204ENST00000429199 DNAJC5BQ9UF47 199 aa43.3■■■■■ 4.52
PGAP3-204ENST00000429199 SCRIBQ14160 1630 aa43.15■■■■■ 4.5
PGAP3-204ENST00000429199 SHROOM4Q9ULL8 1493 aa42.8■■■■■ 4.44
PGAP3-204ENST00000429199 EIF4G1Q04637 1599 aaKnown RBP42.28■■■■■ 4.36
PGAP3-204ENST00000429199 CC2D2AQ9P2K1 1620 aa42.23■■■■■ 4.35
PGAP3-204ENST00000429199 CECR2Q9BXF3 1484 aa41.96■■■■■ 4.31
PGAP3-204ENST00000429199 SMARCA4P51532 1647 aa41.22■■■■■ 4.19
PGAP3-204ENST00000429199 NCAPD3P42695 1498 aa41.08■■■■■ 4.17
PGAP3-204ENST00000429199 ATAD2BQ9ULI0 1458 aa41.08■■■■■ 4.17
PGAP3-204ENST00000429199 BAZ1AQ9NRL2 1556 aaPredicted RBP41.03■■■■■ 4.16
PGAP3-204ENST00000429199 SMARCA2P51531 1590 aa40.94■■■■■ 4.14
PGAP3-204ENST00000429199 MROH2BQ7Z745 1585 aa40.87■■■■■ 4.13
PGAP3-204ENST00000429199 HMGXB3Q12766 1538 aa40.87■■■■■ 4.13
PGAP3-204ENST00000429199 PEG3Q9GZU2 1588 aa40.81■■■■■ 4.12
PGAP3-204ENST00000429199 BAZ1BQ9UIG0 1483 aaKnown RBP40.67■■■■■ 4.1
PGAP3-204ENST00000429199 WIZO95785 1651 aa40.4■■■■■ 4.06
PGAP3-204ENST00000429199 NESP48681 1621 aa40.33■■■■■ 4.05
PGAP3-204ENST00000429199 RSF1Q96T23 1441 aaPredicted RBP40.2■■■■■ 4.03
PGAP3-204ENST00000429199 ERCC6Q03468 1493 aa40.17■■■■■ 4.02
PGAP3-204ENST00000429199 LAMC3Q9Y6N6 1575 aa40.05■■■■■ 4
PGAP3-204ENST00000429199 CUX2O14529 1486 aa39.94■■■■□ 3.98
PGAP3-204ENST00000429199 TOP2AP11388 1531 aaKnown RBP39.91■■■■□ 3.98
PGAP3-204ENST00000429199 KIF21AQ7Z4S6 1674 aa39.83■■■■□ 3.97
PGAP3-204ENST00000429199 THOC2Q8NI27 1593 aaKnown RBP39.83■■■■□ 3.97
PGAP3-204ENST00000429199 CADPSQ9ULU8 1353 aa39.83■■■■□ 3.97
PGAP3-204ENST00000429199 PDS5BQ9NTI5 1447 aa39.73■■■■□ 3.95
PGAP3-204ENST00000429199 CFTRP13569 1480 aa39.56■■■■□ 3.92
PGAP3-204ENST00000429199 CCDC88BA6NC98 1476 aa39.43■■■■□ 3.9
PGAP3-204ENST00000429199 MRC2Q9UBG0 1479 aa39.43■■■■□ 3.9
PGAP3-204ENST00000429199 FANCD2Q9BXW9 1451 aa39.42■■■■□ 3.9
PGAP3-204ENST00000429199 CEP164Q9UPV0 1460 aa39.39■■■■□ 3.9
PGAP3-204ENST00000429199 WDR62O43379 1518 aa39.37■■■■□ 3.89
PGAP3-204ENST00000429199 PRDM2Q13029 1718 aa39.24■■■■□ 3.87
PGAP3-204ENST00000429199 DNAJC5Q9H3Z4 198 aa39.18■■■■□ 3.86
PGAP3-204ENST00000429199 URB2Q14146 1524 aaKnown RBP39.13■■■■□ 3.85
PGAP3-204ENST00000429199 TOPBP1Q92547 1522 aa38.77■■■■□ 3.8
PGAP3-204ENST00000429199 SUPT5HO00267 1087 aaKnown RBP38.74■■■■□ 3.79
PGAP3-204ENST00000429199 DNMBPQ6XZF7 1577 aa38.67■■■■□ 3.78
PGAP3-204ENST00000429199 ABCC8Q09428 1581 aa38.58■■■■□ 3.77
PGAP3-204ENST00000429199 IFT140Q96RY7 1462 aa38.56■■■■□ 3.76
PGAP3-204ENST00000429199 ZNF608Q9ULD9 1512 aaPredicted RBP38.55■■■■□ 3.76
PGAP3-204ENST00000429199 TARBP1Q13395 1621 aaKnown RBP38.43■■■■□ 3.74
PGAP3-204ENST00000429199 POLA1P09884 1462 aaPredicted RBP38.42■■■■□ 3.74
PGAP3-204ENST00000429199 CUX1P39880 1505 aa38.37■■■■□ 3.73
PGAP3-204ENST00000429199 EIF4G3O43432 1585 aaKnown RBP38.36■■■■□ 3.73
PGAP3-204ENST00000429199 RAD54L2Q9Y4B4 1467 aa38.27■■■■□ 3.72
PGAP3-204ENST00000429199 FGD5Q6ZNL6 1462 aa38.26■■■■□ 3.72
PGAP3-204ENST00000429199 AQRO60306 1485 aaKnown RBP eCLIP38.22■■■■□ 3.71
PGAP3-204ENST00000429199 SOGA1O94964 1423 aa38.16■■■■□ 3.7
PGAP3-204ENST00000429199 OSCARQ8IYS5 282 aa38.09■■■■□ 3.69
PGAP3-204ENST00000429199 TDRD9Q8NDG6 1382 aaKnown RBP38.06■■■■□ 3.68
PGAP3-204ENST00000429199 WDR97A6NE52 1622 aa38.04■■■■□ 3.68
PGAP3-204ENST00000429199 CHD1O14646 1710 aa37.95■■■■□ 3.67
PGAP3-204ENST00000429199 SYNJ1O43426 1573 aa37.91■■■■□ 3.66
PGAP3-204ENST00000429199 BIVM-ERCC5R4GMW8 1640 aa37.9■■■■□ 3.66
PGAP3-204ENST00000429199 TOP2BQ02880 1626 aa37.87■■■■□ 3.65
PGAP3-204ENST00000429199 SNAPC4Q5SXM2 1469 aa37.86■■■■□ 3.65
PGAP3-204ENST00000429199 WRNQ14191 1432 aaPredicted RBP eCLIP37.86■■■■□ 3.65
PGAP3-204ENST00000429199 ABCA10Q8WWZ4 1543 aa37.84■■■■□ 3.65
PGAP3-204ENST00000429199 ABCA5Q8WWZ7 1642 aa37.8■■■■□ 3.64
PGAP3-204ENST00000429199 GRIN2BQ13224 1484 aa37.78■■■■□ 3.64
PGAP3-204ENST00000429199 PBRM1Q86U86 1689 aa37.76■■■■□ 3.64
PGAP3-204ENST00000429199 GAPVD1Q14C86 1478 aa37.74■■■■□ 3.63
PGAP3-204ENST00000429199 MAGI1Q96QZ7 1491 aaPredicted RBP37.73■■■■□ 3.63
PGAP3-204ENST00000429199 RIMBP3CA6NJZ7 1639 aa37.72■■■■□ 3.63
PGAP3-204ENST00000429199 RIMBP3BA6NNM3 1639 aa37.72■■■■□ 3.63
PGAP3-204ENST00000429199 RIMBP3Q9UFD9 1639 aa37.72■■■■□ 3.63
PGAP3-204ENST00000429199 FBLN2P98095 1184 aa37.7■■■■□ 3.63
PGAP3-204ENST00000429199 TRIM41Q8WV44 630 aa37.7■■■■□ 3.63
PGAP3-204ENST00000429199 ARHGEF11O15085 1522 aa37.66■■■■□ 3.62
PGAP3-204ENST00000429199 SYNJ2O15056 1496 aa37.61■■■■□ 3.61
PGAP3-204ENST00000429199 CLASP1Q7Z460 1538 aa37.56■■■■□ 3.6
PGAP3-204ENST00000429199 CHMP7Q8WUX9 453 aaPredicted RBP37.51■■■■□ 3.6
PGAP3-204ENST00000429199 ADAMTS12P58397 1594 aa37.46■■■■□ 3.59
PGAP3-204ENST00000429199 ARAP1Q96P48 1450 aa37.37■■■■□ 3.57
PGAP3-204ENST00000429199 ERICH3Q5RHP9 1530 aa37.36■■■■□ 3.57
PGAP3-204ENST00000429199 GRIN2AQ12879 1464 aa37.34■■■■□ 3.57
PGAP3-204ENST00000429199 FHAD1B1AJZ9 1412 aa37.27■■■■□ 3.56
PGAP3-204ENST00000429199 CEP170Q5SW79 1584 aa37.25■■■■□ 3.55
PGAP3-204ENST00000429199 NUP160Q12769 1436 aa37.21■■■■□ 3.55
PGAP3-204ENST00000429199 CYB5RLQ6IPT4 315 aa37.21■■■■□ 3.55
PGAP3-204ENST00000429199 ERCC6L2Q5T890 1561 aa37.06■■■■□ 3.52
PGAP3-204ENST00000429199 KIF27Q86VH2 1401 aa37.04■■■■□ 3.52
PGAP3-204ENST00000429199 IGF1RP08069 1367 aa37.02■■■■□ 3.52
PGAP3-204ENST00000429199 SHROOM2Q13796 1616 aa37.01■■■■□ 3.52
PGAP3-204ENST00000429199 RUSC2Q8N2Y8 1516 aa36.94■■■■□ 3.5
PGAP3-204ENST00000429199 CUL7Q14999 1698 aa36.93■■■■□ 3.5
PGAP3-204ENST00000429199 PRG4Q92954 1404 aaPredicted RBP36.75■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms