RNA–Protein interactions for RNA: ENST00000337679.12

YIF1B-202, Transcript of Yip1 interacting factor homolog B, membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene YIF1B, Length 1,257 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1B-202ENST00000337679 NISCHQ9Y2I1 1504 aa52.61■■■■■ 6.01
YIF1B-202ENST00000337679 CCDC180Q9P1Z9 1646 aa46.83■■■■■ 5.09
YIF1B-202ENST00000337679 ABCC9O60706 1549 aa45.31■■■■■ 4.84
YIF1B-202ENST00000337679 NACADO15069 1562 aa43.92■■■■■ 4.62
YIF1B-202ENST00000337679 ZCCHC6Q5VYS8 1495 aaKnown RBP43.91■■■■■ 4.62
YIF1B-202ENST00000337679 RB1CC1Q8TDY2 1594 aa43.9■■■■■ 4.62
YIF1B-202ENST00000337679 MYO15BQ96JP2 1530 aa43.81■■■■■ 4.6
YIF1B-202ENST00000337679 DCAF1Q9Y4B6 1507 aa43.68■■■■■ 4.58
YIF1B-202ENST00000337679 DCAF8L2P0C7V8 631 aa43.62■■■■■ 4.57
YIF1B-202ENST00000337679 UNC13AQ9UPW8 1703 aa42.83■■■■■ 4.45
YIF1B-202ENST00000337679 SCRIBQ14160 1630 aa42.55■■■■■ 4.4
YIF1B-202ENST00000337679 BICRAQ9NZM4 1560 aa42.44■■■■■ 4.38
YIF1B-202ENST00000337679 SHROOM4Q9ULL8 1493 aa42.3■■■■■ 4.36
YIF1B-202ENST00000337679 PABPN1Q86U42 306 aaKnown RBP eCLIP42.27■■■■■ 4.36
YIF1B-202ENST00000337679 EIF4G1Q04637 1599 aaKnown RBP41.34■■■■■ 4.21
YIF1B-202ENST00000337679 DNAJC5BQ9UF47 199 aa41.19■■■■■ 4.18
YIF1B-202ENST00000337679 CC2D2AQ9P2K1 1620 aa41.09■■■■■ 4.17
YIF1B-202ENST00000337679 BAZ1AQ9NRL2 1556 aaPredicted RBP40.84■■■■■ 4.13
YIF1B-202ENST00000337679 CECR2Q9BXF3 1484 aa40.82■■■■■ 4.12
YIF1B-202ENST00000337679 SMARCA4P51532 1647 aa40.8■■■■■ 4.12
YIF1B-202ENST00000337679 SMARCA2P51531 1590 aa40.55■■■■■ 4.08
YIF1B-202ENST00000337679 ATAD2BQ9ULI0 1458 aa40.47■■■■■ 4.07
YIF1B-202ENST00000337679 MROH2BQ7Z745 1585 aa40.47■■■■■ 4.07
YIF1B-202ENST00000337679 PEG3Q9GZU2 1588 aa40.47■■■■■ 4.07
YIF1B-202ENST00000337679 NCAPD3P42695 1498 aa40.45■■■■■ 4.07
YIF1B-202ENST00000337679 HMGXB3Q12766 1538 aa40.37■■■■■ 4.05
YIF1B-202ENST00000337679 BAZ1BQ9UIG0 1483 aaKnown RBP40.19■■■■■ 4.03
YIF1B-202ENST00000337679 RSF1Q96T23 1441 aaPredicted RBP40.1■■■■■ 4.01
YIF1B-202ENST00000337679 WIZO95785 1651 aa40.05■■■■■ 4
YIF1B-202ENST00000337679 TOP2AP11388 1531 aaKnown RBP39.75■■■■□ 3.95
YIF1B-202ENST00000337679 LAMC3Q9Y6N6 1575 aa39.42■■■■□ 3.9
YIF1B-202ENST00000337679 NESP48681 1621 aa39.25■■■■□ 3.87
YIF1B-202ENST00000337679 CADPSQ9ULU8 1353 aa39.25■■■■□ 3.87
YIF1B-202ENST00000337679 CCDC88BA6NC98 1476 aa39.17■■■■□ 3.86
YIF1B-202ENST00000337679 ERCC6Q03468 1493 aa39.14■■■■□ 3.86
YIF1B-202ENST00000337679 SUPT5HO00267 1087 aaKnown RBP39.13■■■■□ 3.85
YIF1B-202ENST00000337679 PDS5BQ9NTI5 1447 aa39.11■■■■□ 3.85
YIF1B-202ENST00000337679 CFTRP13569 1480 aa39.1■■■■□ 3.85
YIF1B-202ENST00000337679 PRDM2Q13029 1718 aa38.96■■■■□ 3.83
YIF1B-202ENST00000337679 KIF21AQ7Z4S6 1674 aa38.91■■■■□ 3.82
YIF1B-202ENST00000337679 FANCD2Q9BXW9 1451 aa38.8■■■■□ 3.8
YIF1B-202ENST00000337679 CEP164Q9UPV0 1460 aa38.79■■■■□ 3.8
YIF1B-202ENST00000337679 THOC2Q8NI27 1593 aaKnown RBP38.76■■■■□ 3.8
YIF1B-202ENST00000337679 CUX2O14529 1486 aa38.73■■■■□ 3.79
YIF1B-202ENST00000337679 MRC2Q9UBG0 1479 aa38.67■■■■□ 3.78
YIF1B-202ENST00000337679 WDR62O43379 1518 aa38.55■■■■□ 3.76
YIF1B-202ENST00000337679 ABCC8Q09428 1581 aa38.36■■■■□ 3.73
YIF1B-202ENST00000337679 URB2Q14146 1524 aaKnown RBP38.36■■■■□ 3.73
YIF1B-202ENST00000337679 DNMBPQ6XZF7 1577 aa38.26■■■■□ 3.72
YIF1B-202ENST00000337679 TOPBP1Q92547 1522 aa38.21■■■■□ 3.71
YIF1B-202ENST00000337679 CUX1P39880 1505 aa37.98■■■■□ 3.67
YIF1B-202ENST00000337679 IFT140Q96RY7 1462 aa37.97■■■■□ 3.67
YIF1B-202ENST00000337679 POLA1P09884 1462 aaPredicted RBP37.9■■■■□ 3.66
YIF1B-202ENST00000337679 WRNQ14191 1432 aaPredicted RBP eCLIP37.87■■■■□ 3.65
YIF1B-202ENST00000337679 FGD5Q6ZNL6 1462 aa37.84■■■■□ 3.65
YIF1B-202ENST00000337679 BIVM-ERCC5R4GMW8 1640 aa37.83■■■■□ 3.65
YIF1B-202ENST00000337679 TOP2BQ02880 1626 aa37.81■■■■□ 3.64
YIF1B-202ENST00000337679 TARBP1Q13395 1621 aaKnown RBP37.79■■■■□ 3.64
YIF1B-202ENST00000337679 SYNJ1O43426 1573 aa37.72■■■■□ 3.63
YIF1B-202ENST00000337679 SOGA1O94964 1423 aa37.72■■■■□ 3.63
YIF1B-202ENST00000337679 WDR97A6NE52 1622 aa37.71■■■■□ 3.63
YIF1B-202ENST00000337679 ZNF608Q9ULD9 1512 aaPredicted RBP37.63■■■■□ 3.61
YIF1B-202ENST00000337679 RAD54L2Q9Y4B4 1467 aa37.63■■■■□ 3.61
YIF1B-202ENST00000337679 EIF4G3O43432 1585 aaKnown RBP37.62■■■■□ 3.61
YIF1B-202ENST00000337679 ABCA10Q8WWZ4 1543 aa37.54■■■■□ 3.6
YIF1B-202ENST00000337679 AQRO60306 1485 aaKnown RBP eCLIP37.44■■■■□ 3.584e-7■■■■□ 19.6
YIF1B-202ENST00000337679 TDRD9Q8NDG6 1382 aaKnown RBP37.4■■■■□ 3.58
YIF1B-202ENST00000337679 ABCA5Q8WWZ7 1642 aa37.38■■■■□ 3.57
YIF1B-202ENST00000337679 GAPVD1Q14C86 1478 aa37.33■■■■□ 3.57
YIF1B-202ENST00000337679 GRIN2BQ13224 1484 aa37.33■■■■□ 3.57
YIF1B-202ENST00000337679 PBRM1Q86U86 1689 aa37.29■■■■□ 3.56
YIF1B-202ENST00000337679 MAGI1Q96QZ7 1491 aaPredicted RBP37.25■■■■□ 3.55
YIF1B-202ENST00000337679 SNAPC4Q5SXM2 1469 aa37.18■■■■□ 3.54
YIF1B-202ENST00000337679 ERICH3Q5RHP9 1530 aa37.14■■■■□ 3.54
YIF1B-202ENST00000337679 KIF27Q86VH2 1401 aa37.09■■■■□ 3.53
YIF1B-202ENST00000337679 CHD1O14646 1710 aa37.08■■■■□ 3.53
YIF1B-202ENST00000337679 DNAJC5Q9H3Z4 198 aa37.08■■■■□ 3.53
YIF1B-202ENST00000337679 SYNJ2O15056 1496 aa37.06■■■■□ 3.52
YIF1B-202ENST00000337679 TRIM41Q8WV44 630 aa37.05■■■■□ 3.52
YIF1B-202ENST00000337679 OSCARQ8IYS5 282 aa37.04■■■■□ 3.52
YIF1B-202ENST00000337679 ADAMTS12P58397 1594 aa37■■■■□ 3.51
YIF1B-202ENST00000337679 FHAD1B1AJZ9 1412 aa36.93■■■■□ 3.5
YIF1B-202ENST00000337679 CHMP7Q8WUX9 453 aaPredicted RBP36.93■■■■□ 3.5
YIF1B-202ENST00000337679 FBLN2P98095 1184 aa36.92■■■■□ 3.5
YIF1B-202ENST00000337679 CUL7Q14999 1698 aa36.9■■■■□ 3.5
YIF1B-202ENST00000337679 GRIN2AQ12879 1464 aa36.82■■■■□ 3.49
YIF1B-202ENST00000337679 IGF1RP08069 1367 aa36.8■■■■□ 3.48
YIF1B-202ENST00000337679 CLASP1Q7Z460 1538 aa36.7■■■■□ 3.47
YIF1B-202ENST00000337679 CHIC1Q5VXU3 224 aa36.7■■■■□ 3.47
YIF1B-202ENST00000337679 NUP160Q12769 1436 aa36.66■■■■□ 3.46
YIF1B-202ENST00000337679 EEA1Q15075 1411 aa36.63■■■■□ 3.45
YIF1B-202ENST00000337679 CARMIL1Q5VZK9 1371 aa36.63■■■■□ 3.45
YIF1B-202ENST00000337679 RUSC2Q8N2Y8 1516 aa36.61■■■■□ 3.45
YIF1B-202ENST00000337679 CEP170Q5SW79 1584 aa36.59■■■■□ 3.45
YIF1B-202ENST00000337679 RAPGEF2Q9Y4G8 1499 aa36.5■■■■□ 3.43
YIF1B-202ENST00000337679 ARHGEF11O15085 1522 aa36.48■■■■□ 3.43
YIF1B-202ENST00000337679 RIMBP3CA6NJZ7 1639 aa36.45■■■■□ 3.42
YIF1B-202ENST00000337679 RIMBP3BA6NNM3 1639 aa36.45■■■■□ 3.42
YIF1B-202ENST00000337679 RIMBP3Q9UFD9 1639 aa36.45■■■■□ 3.42
YIF1B-202ENST00000337679 PRXQ9BXM0 1461 aa36.4■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms