RNA–Protein interactions for RNA: ENST00000639222.1

TNFRSF11A-207, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNFRSF11A, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-207ENST00000639222 NISCHQ9Y2I1 1504 aa53.01■■■■■ 6.08
TNFRSF11A-207ENST00000639222 CCDC180Q9P1Z9 1646 aa47.43■■■■■ 5.18
TNFRSF11A-207ENST00000639222 ABCC9O60706 1549 aa46.92■■■■■ 5.1
TNFRSF11A-207ENST00000639222 RB1CC1Q8TDY2 1594 aa44.87■■■■■ 4.77
TNFRSF11A-207ENST00000639222 NACADO15069 1562 aa44.67■■■■■ 4.74
TNFRSF11A-207ENST00000639222 DCAF8L2P0C7V8 631 aa44.48■■■■■ 4.71
TNFRSF11A-207ENST00000639222 MYO15BQ96JP2 1530 aa44.18■■■■■ 4.66
TNFRSF11A-207ENST00000639222 ZCCHC6Q5VYS8 1495 aaKnown RBP44.05■■■■■ 4.64
TNFRSF11A-207ENST00000639222 UNC13AQ9UPW8 1703 aa44.02■■■■■ 4.64
TNFRSF11A-207ENST00000639222 DCAF1Q9Y4B6 1507 aa43.8■■■■■ 4.6
TNFRSF11A-207ENST00000639222 PABPN1Q86U42 306 aaKnown RBP eCLIP43.72■■■■■ 4.59
TNFRSF11A-207ENST00000639222 BICRAQ9NZM4 1560 aa43.58■■■■■ 4.57
TNFRSF11A-207ENST00000639222 DNAJC5BQ9UF47 199 aa43.56■■■■■ 4.56
TNFRSF11A-207ENST00000639222 SCRIBQ14160 1630 aa43.26■■■■■ 4.52
TNFRSF11A-207ENST00000639222 SHROOM4Q9ULL8 1493 aa42.97■■■■■ 4.47
TNFRSF11A-207ENST00000639222 EIF4G1Q04637 1599 aaKnown RBP42.46■■■■■ 4.39
TNFRSF11A-207ENST00000639222 CC2D2AQ9P2K1 1620 aa42.45■■■■■ 4.39
TNFRSF11A-207ENST00000639222 CECR2Q9BXF3 1484 aa42.19■■■■■ 4.34
TNFRSF11A-207ENST00000639222 SMARCA4P51532 1647 aa41.29■■■■■ 4.2
TNFRSF11A-207ENST00000639222 NCAPD3P42695 1498 aa41.2■■■■■ 4.19
TNFRSF11A-207ENST00000639222 ATAD2BQ9ULI0 1458 aa41.15■■■■■ 4.18
TNFRSF11A-207ENST00000639222 BAZ1AQ9NRL2 1556 aaPredicted RBP41.12■■■■■ 4.17
TNFRSF11A-207ENST00000639222 SMARCA2P51531 1590 aa41.08■■■■■ 4.17
TNFRSF11A-207ENST00000639222 HMGXB3Q12766 1538 aa40.98■■■■■ 4.15
TNFRSF11A-207ENST00000639222 MROH2BQ7Z745 1585 aa40.87■■■■■ 4.13
TNFRSF11A-207ENST00000639222 PEG3Q9GZU2 1588 aa40.86■■■■■ 4.13
TNFRSF11A-207ENST00000639222 BAZ1BQ9UIG0 1483 aaKnown RBP40.8■■■■■ 4.12
TNFRSF11A-207ENST00000639222 ERCC6Q03468 1493 aa40.46■■■■■ 4.07
TNFRSF11A-207ENST00000639222 NESP48681 1621 aa40.46■■■■■ 4.07
TNFRSF11A-207ENST00000639222 WIZO95785 1651 aa40.46■■■■■ 4.07
TNFRSF11A-207ENST00000639222 LAMC3Q9Y6N6 1575 aa40.24■■■■■ 4.03
TNFRSF11A-207ENST00000639222 CUX2O14529 1486 aa40.21■■■■■ 4.03
TNFRSF11A-207ENST00000639222 RSF1Q96T23 1441 aaPredicted RBP40.16■■■■■ 4.02
TNFRSF11A-207ENST00000639222 KIF21AQ7Z4S6 1674 aa40.04■■■■■ 4
TNFRSF11A-207ENST00000639222 THOC2Q8NI27 1593 aaKnown RBP39.99■■■■□ 3.99
TNFRSF11A-207ENST00000639222 CADPSQ9ULU8 1353 aa39.96■■■■□ 3.99
TNFRSF11A-207ENST00000639222 PDS5BQ9NTI5 1447 aa39.93■■■■□ 3.98
TNFRSF11A-207ENST00000639222 TOP2AP11388 1531 aaKnown RBP39.93■■■■□ 3.98
TNFRSF11A-207ENST00000639222 CFTRP13569 1480 aa39.62■■■■□ 3.93
TNFRSF11A-207ENST00000639222 DNAJC5Q9H3Z4 198 aa39.62■■■■□ 3.93
TNFRSF11A-207ENST00000639222 MRC2Q9UBG0 1479 aa39.6■■■■□ 3.93
TNFRSF11A-207ENST00000639222 CEP164Q9UPV0 1460 aa39.55■■■■□ 3.92
TNFRSF11A-207ENST00000639222 FANCD2Q9BXW9 1451 aa39.54■■■■□ 3.92
TNFRSF11A-207ENST00000639222 WDR62O43379 1518 aa39.51■■■■□ 3.92
TNFRSF11A-207ENST00000639222 CCDC88BA6NC98 1476 aa39.44■■■■□ 3.9
TNFRSF11A-207ENST00000639222 PRDM2Q13029 1718 aa39.43■■■■□ 3.9
TNFRSF11A-207ENST00000639222 URB2Q14146 1524 aaKnown RBP39.21■■■■□ 3.87
TNFRSF11A-207ENST00000639222 TOPBP1Q92547 1522 aa38.86■■■■□ 3.81
TNFRSF11A-207ENST00000639222 DNMBPQ6XZF7 1577 aa38.77■■■■□ 3.8
TNFRSF11A-207ENST00000639222 ABCC8Q09428 1581 aa38.76■■■■□ 3.8
TNFRSF11A-207ENST00000639222 SUPT5HO00267 1087 aaKnown RBP38.71■■■■□ 3.79
TNFRSF11A-207ENST00000639222 IFT140Q96RY7 1462 aa38.71■■■■□ 3.79
TNFRSF11A-207ENST00000639222 ZNF608Q9ULD9 1512 aaPredicted RBP38.64■■■■□ 3.78
TNFRSF11A-207ENST00000639222 TARBP1Q13395 1621 aaKnown RBP38.52■■■■□ 3.76
TNFRSF11A-207ENST00000639222 EIF4G3O43432 1585 aaKnown RBP38.5■■■■□ 3.75
TNFRSF11A-207ENST00000639222 POLA1P09884 1462 aaPredicted RBP38.48■■■■□ 3.75
TNFRSF11A-207ENST00000639222 OSCARQ8IYS5 282 aa38.41■■■■□ 3.74
TNFRSF11A-207ENST00000639222 CUX1P39880 1505 aa38.38■■■■□ 3.74
TNFRSF11A-207ENST00000639222 RAD54L2Q9Y4B4 1467 aa38.35■■■■□ 3.73
TNFRSF11A-207ENST00000639222 AQRO60306 1485 aaKnown RBP eCLIP38.33■■■■□ 3.73
TNFRSF11A-207ENST00000639222 FGD5Q6ZNL6 1462 aa38.33■■■■□ 3.73
TNFRSF11A-207ENST00000639222 SOGA1O94964 1423 aa38.29■■■■□ 3.72
TNFRSF11A-207ENST00000639222 CHD1O14646 1710 aa38.18■■■■□ 3.7
TNFRSF11A-207ENST00000639222 TDRD9Q8NDG6 1382 aaKnown RBP38.16■■■■□ 3.7
TNFRSF11A-207ENST00000639222 WDR97A6NE52 1622 aa38.12■■■■□ 3.69
TNFRSF11A-207ENST00000639222 TRIM41Q8WV44 630 aa38.11■■■■□ 3.69
TNFRSF11A-207ENST00000639222 RIMBP3CA6NJZ7 1639 aa37.98■■■■□ 3.67
TNFRSF11A-207ENST00000639222 RIMBP3BA6NNM3 1639 aa37.98■■■■□ 3.67
TNFRSF11A-207ENST00000639222 RIMBP3Q9UFD9 1639 aa37.98■■■■□ 3.67
TNFRSF11A-207ENST00000639222 SNAPC4Q5SXM2 1469 aa37.97■■■■□ 3.67
TNFRSF11A-207ENST00000639222 FBLN2P98095 1184 aa37.95■■■■□ 3.67
TNFRSF11A-207ENST00000639222 BIVM-ERCC5R4GMW8 1640 aa37.93■■■■□ 3.66
TNFRSF11A-207ENST00000639222 PBRM1Q86U86 1689 aa37.92■■■■□ 3.66
TNFRSF11A-207ENST00000639222 GRIN2BQ13224 1484 aa37.91■■■■□ 3.66
TNFRSF11A-207ENST00000639222 TOP2BQ02880 1626 aa37.9■■■■□ 3.66
TNFRSF11A-207ENST00000639222 SYNJ1O43426 1573 aa37.89■■■■□ 3.66
TNFRSF11A-207ENST00000639222 ABCA10Q8WWZ4 1543 aa37.89■■■■□ 3.66
TNFRSF11A-207ENST00000639222 MAGI1Q96QZ7 1491 aaPredicted RBP37.88■■■■□ 3.65
TNFRSF11A-207ENST00000639222 WRNQ14191 1432 aaPredicted RBP eCLIP37.87■■■■□ 3.65
TNFRSF11A-207ENST00000639222 ARHGEF11O15085 1522 aa37.87■■■■□ 3.65
TNFRSF11A-207ENST00000639222 ABCA5Q8WWZ7 1642 aa37.86■■■■□ 3.65
TNFRSF11A-207ENST00000639222 GAPVD1Q14C86 1478 aa37.85■■■■□ 3.65
TNFRSF11A-207ENST00000639222 SYNJ2O15056 1496 aa37.74■■■■□ 3.63
TNFRSF11A-207ENST00000639222 CHMP7Q8WUX9 453 aaPredicted RBP37.73■■■■□ 3.63
TNFRSF11A-207ENST00000639222 CLASP1Q7Z460 1538 aa37.67■■■■□ 3.62
TNFRSF11A-207ENST00000639222 ARAP1Q96P48 1450 aa37.53■■■■□ 3.6
TNFRSF11A-207ENST00000639222 ADAMTS12P58397 1594 aa37.53■■■■□ 3.6
TNFRSF11A-207ENST00000639222 CYB5RLQ6IPT4 315 aa37.5■■■■□ 3.59
TNFRSF11A-207ENST00000639222 GRIN2AQ12879 1464 aa37.45■■■■□ 3.59
TNFRSF11A-207ENST00000639222 ERICH3Q5RHP9 1530 aa37.44■■■■□ 3.58
TNFRSF11A-207ENST00000639222 FHAD1B1AJZ9 1412 aa37.37■■■■□ 3.57
TNFRSF11A-207ENST00000639222 CEP170Q5SW79 1584 aa37.34■■■■□ 3.57
TNFRSF11A-207ENST00000639222 NUP160Q12769 1436 aa37.28■■■■□ 3.56
TNFRSF11A-207ENST00000639222 ERCC6L2Q5T890 1561 aa37.15■■■■□ 3.54
TNFRSF11A-207ENST00000639222 SHROOM2Q13796 1616 aa37.14■■■■□ 3.54
TNFRSF11A-207ENST00000639222 KIF27Q86VH2 1401 aa37.1■■■■□ 3.53
TNFRSF11A-207ENST00000639222 CUL7Q14999 1698 aa37.03■■■■□ 3.52
TNFRSF11A-207ENST00000639222 IGF1RP08069 1367 aa37.03■■■■□ 3.52
TNFRSF11A-207ENST00000639222 RUSC2Q8N2Y8 1516 aa37■■■■□ 3.51
TNFRSF11A-207ENST00000639222 TRHP20396 242 aaPredicted RBP36.93■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms