RNA–Protein interactions for RNA: ENST00000546495.5

C17orf49-202, Transcript of chromosome 17 open reading frame 49, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene C17orf49, Length 996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C17orf49-202ENST00000546495 NISCHQ9Y2I1 1504 aa53.27■■■■■ 6.12
C17orf49-202ENST00000546495 CCDC180Q9P1Z9 1646 aa47.9■■■■■ 5.26
C17orf49-202ENST00000546495 ABCC9O60706 1549 aa47.82■■■■■ 5.25
C17orf49-202ENST00000546495 RB1CC1Q8TDY2 1594 aa45.59■■■■■ 4.89
C17orf49-202ENST00000546495 NACADO15069 1562 aa45.28■■■■■ 4.84
C17orf49-202ENST00000546495 DCAF8L2P0C7V8 631 aa44.83■■■■■ 4.77
C17orf49-202ENST00000546495 DNAJC5BQ9UF47 199 aa44.82■■■■■ 4.77
C17orf49-202ENST00000546495 MYO15BQ96JP2 1530 aa44.68■■■■■ 4.74
C17orf49-202ENST00000546495 UNC13AQ9UPW8 1703 aa44.5■■■■■ 4.71
C17orf49-202ENST00000546495 PABPN1Q86U42 306 aaKnown RBP eCLIP44.46■■■■■ 4.71
C17orf49-202ENST00000546495 BICRAQ9NZM4 1560 aa44.22■■■■■ 4.67
C17orf49-202ENST00000546495 ZCCHC6Q5VYS8 1495 aaKnown RBP44.16■■■■■ 4.66
C17orf49-202ENST00000546495 DCAF1Q9Y4B6 1507 aa44.08■■■■■ 4.65
C17orf49-202ENST00000546495 SHROOM4Q9ULL8 1493 aa43.76■■■■■ 4.6
C17orf49-202ENST00000546495 SCRIBQ14160 1630 aa43.55■■■■■ 4.56
C17orf49-202ENST00000546495 CC2D2AQ9P2K1 1620 aa43.23■■■■■ 4.51
C17orf49-202ENST00000546495 EIF4G1Q04637 1599 aaKnown RBP43.16■■■■■ 4.5
C17orf49-202ENST00000546495 CECR2Q9BXF3 1484 aa43.13■■■■■ 4.49
C17orf49-202ENST00000546495 NCAPD3P42695 1498 aa41.78■■■■■ 4.28
C17orf49-202ENST00000546495 ATAD2BQ9ULI0 1458 aa41.61■■■■■ 4.25
C17orf49-202ENST00000546495 SMARCA4P51532 1647 aa41.58■■■■■ 4.25
C17orf49-202ENST00000546495 SMARCA2P51531 1590 aa41.55■■■■■ 4.24
C17orf49-202ENST00000546495 HMGXB3Q12766 1538 aa41.5■■■■■ 4.23
C17orf49-202ENST00000546495 BAZ1AQ9NRL2 1556 aaPredicted RBP41.39■■■■■ 4.22
C17orf49-202ENST00000546495 CUX2O14529 1486 aa41.34■■■■■ 4.21
C17orf49-202ENST00000546495 ERCC6Q03468 1493 aa41.34■■■■■ 4.21
C17orf49-202ENST00000546495 DNAJC5Q9H3Z4 198 aa41.28■■■■■ 4.2
C17orf49-202ENST00000546495 BAZ1BQ9UIG0 1483 aaKnown RBP41.22■■■■■ 4.19
C17orf49-202ENST00000546495 PEG3Q9GZU2 1588 aa41.21■■■■■ 4.19
C17orf49-202ENST00000546495 NESP48681 1621 aa41.06■■■■■ 4.16
C17orf49-202ENST00000546495 MROH2BQ7Z745 1585 aa41.01■■■■■ 4.16
C17orf49-202ENST00000546495 LAMC3Q9Y6N6 1575 aa40.86■■■■■ 4.13
C17orf49-202ENST00000546495 THOC2Q8NI27 1593 aaKnown RBP40.74■■■■■ 4.11
C17orf49-202ENST00000546495 PDS5BQ9NTI5 1447 aa40.61■■■■■ 4.09
C17orf49-202ENST00000546495 KIF21AQ7Z4S6 1674 aa40.56■■■■■ 4.08
C17orf49-202ENST00000546495 WIZO95785 1651 aa40.5■■■■■ 4.07
C17orf49-202ENST00000546495 CADPSQ9ULU8 1353 aa40.48■■■■■ 4.07
C17orf49-202ENST00000546495 MRC2Q9UBG0 1479 aa40.27■■■■■ 4.04
C17orf49-202ENST00000546495 WDR62O43379 1518 aa40.18■■■■■ 4.02
C17orf49-202ENST00000546495 RSF1Q96T23 1441 aaPredicted RBP40.15■■■■■ 4.02
C17orf49-202ENST00000546495 CEP164Q9UPV0 1460 aa40.1■■■■■ 4.01
C17orf49-202ENST00000546495 TOP2AP11388 1531 aaKnown RBP40.06■■■■■ 4
C17orf49-202ENST00000546495 CFTRP13569 1480 aa40.02■■■■■ 4
C17orf49-202ENST00000546495 FANCD2Q9BXW9 1451 aa40.02■■■■■ 4
C17orf49-202ENST00000546495 URB2Q14146 1524 aaKnown RBP39.68■■■■□ 3.94
C17orf49-202ENST00000546495 PRDM2Q13029 1718 aa39.66■■■■□ 3.94
C17orf49-202ENST00000546495 CCDC88BA6NC98 1476 aa39.55■■■■□ 3.92
C17orf49-202ENST00000546495 TRIM41Q8WV44 630 aa39.39■■■■□ 3.9
C17orf49-202ENST00000546495 OSCARQ8IYS5 282 aa39.36■■■■□ 3.89
C17orf49-202ENST00000546495 IFT140Q96RY7 1462 aa39.3■■■■□ 3.88
C17orf49-202ENST00000546495 TOPBP1Q92547 1522 aa39.26■■■■□ 3.88
C17orf49-202ENST00000546495 ABCC8Q09428 1581 aa39.22■■■■□ 3.87
C17orf49-202ENST00000546495 ZNF608Q9ULD9 1512 aaPredicted RBP39.18■■■■□ 3.86
C17orf49-202ENST00000546495 DNMBPQ6XZF7 1577 aa39.14■■■■□ 3.86
C17orf49-202ENST00000546495 EIF4G3O43432 1585 aaKnown RBP39.01■■■■□ 3.84
C17orf49-202ENST00000546495 TARBP1Q13395 1621 aaKnown RBP38.92■■■■□ 3.82
C17orf49-202ENST00000546495 RIMBP3CA6NJZ7 1639 aa38.88■■■■□ 3.81
C17orf49-202ENST00000546495 RIMBP3BA6NNM3 1639 aa38.88■■■■□ 3.81
C17orf49-202ENST00000546495 RIMBP3Q9UFD9 1639 aa38.88■■■■□ 3.81
C17orf49-202ENST00000546495 POLA1P09884 1462 aaPredicted RBP38.86■■■■□ 3.81
C17orf49-202ENST00000546495 AQRO60306 1485 aaKnown RBP eCLIP38.79■■■■□ 3.8
C17orf49-202ENST00000546495 ARHGEF11O15085 1522 aa38.77■■■■□ 3.8
C17orf49-202ENST00000546495 CHD1O14646 1710 aa38.72■■■■□ 3.79
C17orf49-202ENST00000546495 RAD54L2Q9Y4B4 1467 aa38.66■■■■□ 3.78
C17orf49-202ENST00000546495 SOGA1O94964 1423 aa38.65■■■■□ 3.78
C17orf49-202ENST00000546495 WDR97A6NE52 1622 aa38.63■■■■□ 3.77
C17orf49-202ENST00000546495 FGD5Q6ZNL6 1462 aa38.6■■■■□ 3.77
C17orf49-202ENST00000546495 CUX1P39880 1505 aa38.55■■■■□ 3.76
C17orf49-202ENST00000546495 TDRD9Q8NDG6 1382 aaKnown RBP38.55■■■■□ 3.76
C17orf49-202ENST00000546495 FBLN2P98095 1184 aa38.51■■■■□ 3.76
C17orf49-202ENST00000546495 SNAPC4Q5SXM2 1469 aa38.46■■■■□ 3.75
C17orf49-202ENST00000546495 MAGI1Q96QZ7 1491 aaPredicted RBP38.4■■■■□ 3.74
C17orf49-202ENST00000546495 CYB5RLQ6IPT4 315 aa38.39■■■■□ 3.74
C17orf49-202ENST00000546495 ARAP1Q96P48 1450 aa38.38■■■■□ 3.73
C17orf49-202ENST00000546495 GRIN2BQ13224 1484 aa38.37■■■■□ 3.73
C17orf49-202ENST00000546495 CLASP1Q7Z460 1538 aa38.3■■■■□ 3.72
C17orf49-202ENST00000546495 SYNJ1O43426 1573 aa38.29■■■■□ 3.72
C17orf49-202ENST00000546495 CHMP7Q8WUX9 453 aaPredicted RBP38.27■■■■□ 3.72
C17orf49-202ENST00000546495 SYNJ2O15056 1496 aa38.25■■■■□ 3.71
C17orf49-202ENST00000546495 SUPT5HO00267 1087 aaKnown RBP38.22■■■■□ 3.71
C17orf49-202ENST00000546495 PBRM1Q86U86 1689 aa38.21■■■■□ 3.71
C17orf49-202ENST00000546495 GAPVD1Q14C86 1478 aa38.21■■■■□ 3.71
C17orf49-202ENST00000546495 ABCA10Q8WWZ4 1543 aa38.19■■■■□ 3.7
C17orf49-202ENST00000546495 ABCA5Q8WWZ7 1642 aa38.14■■■■□ 3.7
C17orf49-202ENST00000546495 WRNQ14191 1432 aaPredicted RBP eCLIP38.02■■■■□ 3.68
C17orf49-202ENST00000546495 TRHP20396 242 aaPredicted RBP37.99■■■■□ 3.67
C17orf49-202ENST00000546495 BIVM-ERCC5R4GMW8 1640 aa37.96■■■■□ 3.67
C17orf49-202ENST00000546495 TOP2BQ02880 1626 aa37.95■■■■□ 3.67
C17orf49-202ENST00000546495 GRIN2AQ12879 1464 aa37.87■■■■□ 3.65
C17orf49-202ENST00000546495 ADAMTS12P58397 1594 aa37.87■■■■□ 3.65
C17orf49-202ENST00000546495 NUP160Q12769 1436 aa37.76■■■■□ 3.63
C17orf49-202ENST00000546495 FHAD1B1AJZ9 1412 aa37.74■■■■□ 3.63
C17orf49-202ENST00000546495 ERICH3Q5RHP9 1530 aa37.72■■■■□ 3.63
C17orf49-202ENST00000546495 CEP170Q5SW79 1584 aa37.72■■■■□ 3.63
C17orf49-202ENST00000546495 ERCC6L2Q5T890 1561 aa37.63■■■■□ 3.61
C17orf49-202ENST00000546495 SHROOM2Q13796 1616 aa37.61■■■■□ 3.61
C17orf49-202ENST00000546495 PRG4Q92954 1404 aaPredicted RBP37.35■■■■□ 3.57
C17orf49-202ENST00000546495 RUSC2Q8N2Y8 1516 aa37.33■■■■□ 3.57
C17orf49-202ENST00000546495 JPH4Q96JJ6 628 aa37.29■■■■□ 3.56
C17orf49-202ENST00000546495 KIF27Q86VH2 1401 aa37.2■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms