RNA–Protein interactions for RNA: ENST00000340042.1

GLI4-201, Transcript of GLI family zinc finger 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GLI4, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI4-201ENST00000340042 NISCHQ9Y2I1 1504 aa52.76■■■■■ 6.04
GLI4-201ENST00000340042 CCDC180Q9P1Z9 1646 aa47.07■■■■■ 5.13
GLI4-201ENST00000340042 ABCC9O60706 1549 aa46.53■■■■■ 5.04
GLI4-201ENST00000340042 RB1CC1Q8TDY2 1594 aa44.5■■■■■ 4.71
GLI4-201ENST00000340042 NACADO15069 1562 aa44.35■■■■■ 4.69
GLI4-201ENST00000340042 DCAF8L2P0C7V8 631 aa44.24■■■■■ 4.67
GLI4-201ENST00000340042 MYO15BQ96JP2 1530 aa43.95■■■■■ 4.63
GLI4-201ENST00000340042 ZCCHC6Q5VYS8 1495 aaKnown RBP43.89■■■■■ 4.62
GLI4-201ENST00000340042 DNAJC5BQ9UF47 199 aa43.73■■■■■ 4.59
GLI4-201ENST00000340042 DCAF1Q9Y4B6 1507 aa43.63■■■■■ 4.57
GLI4-201ENST00000340042 UNC13AQ9UPW8 1703 aa43.45■■■■■ 4.55
GLI4-201ENST00000340042 PABPN1Q86U42 306 aaKnown RBP eCLIP43.38■■■■■ 4.53
GLI4-201ENST00000340042 BICRAQ9NZM4 1560 aa43.15■■■■■ 4.5
GLI4-201ENST00000340042 SCRIBQ14160 1630 aa42.96■■■■■ 4.47
GLI4-201ENST00000340042 SHROOM4Q9ULL8 1493 aa42.69■■■■■ 4.42
GLI4-201ENST00000340042 EIF4G1Q04637 1599 aaKnown RBP42.06■■■■■ 4.32
GLI4-201ENST00000340042 CC2D2AQ9P2K1 1620 aa42.02■■■■■ 4.32
GLI4-201ENST00000340042 CECR2Q9BXF3 1484 aa41.95■■■■■ 4.31
GLI4-201ENST00000340042 SMARCA4P51532 1647 aa41.03■■■■■ 4.16
GLI4-201ENST00000340042 BAZ1AQ9NRL2 1556 aaPredicted RBP40.94■■■■■ 4.14
GLI4-201ENST00000340042 NCAPD3P42695 1498 aa40.92■■■■■ 4.14
GLI4-201ENST00000340042 ATAD2BQ9ULI0 1458 aa40.9■■■■■ 4.14
GLI4-201ENST00000340042 SMARCA2P51531 1590 aa40.83■■■■■ 4.13
GLI4-201ENST00000340042 HMGXB3Q12766 1538 aa40.71■■■■■ 4.11
GLI4-201ENST00000340042 MROH2BQ7Z745 1585 aa40.66■■■■■ 4.1
GLI4-201ENST00000340042 PEG3Q9GZU2 1588 aa40.62■■■■■ 4.09
GLI4-201ENST00000340042 BAZ1BQ9UIG0 1483 aaKnown RBP40.57■■■■■ 4.08
GLI4-201ENST00000340042 DNAJC5Q9H3Z4 198 aa40.26■■■■■ 4.04
GLI4-201ENST00000340042 WIZO95785 1651 aa40.21■■■■■ 4.03
GLI4-201ENST00000340042 ERCC6Q03468 1493 aa40.2■■■■■ 4.03
GLI4-201ENST00000340042 CUX2O14529 1486 aa40.17■■■■■ 4.02
GLI4-201ENST00000340042 NESP48681 1621 aa40.08■■■■■ 4.01
GLI4-201ENST00000340042 RSF1Q96T23 1441 aaPredicted RBP40.06■■■■■ 4
GLI4-201ENST00000340042 LAMC3Q9Y6N6 1575 aa39.91■■■■□ 3.98
GLI4-201ENST00000340042 TOP2AP11388 1531 aaKnown RBP39.78■■■■□ 3.96
GLI4-201ENST00000340042 CADPSQ9ULU8 1353 aa39.72■■■■□ 3.95
GLI4-201ENST00000340042 PDS5BQ9NTI5 1447 aa39.67■■■■□ 3.94
GLI4-201ENST00000340042 KIF21AQ7Z4S6 1674 aa39.58■■■■□ 3.93
GLI4-201ENST00000340042 THOC2Q8NI27 1593 aaKnown RBP39.56■■■■□ 3.92
GLI4-201ENST00000340042 CFTRP13569 1480 aa39.4■■■■□ 3.9
GLI4-201ENST00000340042 MRC2Q9UBG0 1479 aa39.29■■■■□ 3.88
GLI4-201ENST00000340042 CCDC88BA6NC98 1476 aa39.29■■■■□ 3.88
GLI4-201ENST00000340042 FANCD2Q9BXW9 1451 aa39.29■■■■□ 3.88
GLI4-201ENST00000340042 CEP164Q9UPV0 1460 aa39.28■■■■□ 3.88
GLI4-201ENST00000340042 WDR62O43379 1518 aa39.17■■■■□ 3.86
GLI4-201ENST00000340042 PRDM2Q13029 1718 aa39.06■■■■□ 3.84
GLI4-201ENST00000340042 URB2Q14146 1524 aaKnown RBP38.91■■■■□ 3.82
GLI4-201ENST00000340042 SUPT5HO00267 1087 aaKnown RBP38.78■■■■□ 3.8
GLI4-201ENST00000340042 TOPBP1Q92547 1522 aa38.6■■■■□ 3.77
GLI4-201ENST00000340042 ABCC8Q09428 1581 aa38.56■■■■□ 3.76
GLI4-201ENST00000340042 DNMBPQ6XZF7 1577 aa38.54■■■■□ 3.76
GLI4-201ENST00000340042 IFT140Q96RY7 1462 aa38.46■■■■□ 3.75
GLI4-201ENST00000340042 OSCARQ8IYS5 282 aa38.44■■■■□ 3.74
GLI4-201ENST00000340042 TRIM41Q8WV44 630 aa38.39■■■■□ 3.74
GLI4-201ENST00000340042 ZNF608Q9ULD9 1512 aaPredicted RBP38.32■■■■□ 3.72
GLI4-201ENST00000340042 POLA1P09884 1462 aaPredicted RBP38.26■■■■□ 3.72
GLI4-201ENST00000340042 TARBP1Q13395 1621 aaKnown RBP38.2■■■■□ 3.71
GLI4-201ENST00000340042 CUX1P39880 1505 aa38.17■■■■□ 3.7
GLI4-201ENST00000340042 EIF4G3O43432 1585 aaKnown RBP38.17■■■■□ 3.7
GLI4-201ENST00000340042 FGD5Q6ZNL6 1462 aa38.12■■■■□ 3.69
GLI4-201ENST00000340042 RAD54L2Q9Y4B4 1467 aa38.1■■■■□ 3.69
GLI4-201ENST00000340042 SOGA1O94964 1423 aa38.08■■■■□ 3.69
GLI4-201ENST00000340042 AQRO60306 1485 aaKnown RBP eCLIP38.05■■■■□ 3.68
GLI4-201ENST00000340042 TDRD9Q8NDG6 1382 aaKnown RBP37.92■■■■□ 3.66
GLI4-201ENST00000340042 WDR97A6NE52 1622 aa37.89■■■■□ 3.66
GLI4-201ENST00000340042 WRNQ14191 1432 aaPredicted RBP eCLIP37.8■■■■□ 3.64
GLI4-201ENST00000340042 TOP2BQ02880 1626 aa37.75■■■■□ 3.63
GLI4-201ENST00000340042 RIMBP3CA6NJZ7 1639 aa37.74■■■■□ 3.63
GLI4-201ENST00000340042 RIMBP3BA6NNM3 1639 aa37.74■■■■□ 3.63
GLI4-201ENST00000340042 RIMBP3Q9UFD9 1639 aa37.74■■■■□ 3.63
GLI4-201ENST00000340042 BIVM-ERCC5R4GMW8 1640 aa37.74■■■■□ 3.63
GLI4-201ENST00000340042 CHD1O14646 1710 aa37.73■■■■□ 3.63
GLI4-201ENST00000340042 SYNJ1O43426 1573 aa37.73■■■■□ 3.63
GLI4-201ENST00000340042 ABCA10Q8WWZ4 1543 aa37.72■■■■□ 3.63
GLI4-201ENST00000340042 SNAPC4Q5SXM2 1469 aa37.71■■■■□ 3.63
GLI4-201ENST00000340042 GRIN2BQ13224 1484 aa37.7■■■■□ 3.63
GLI4-201ENST00000340042 FBLN2P98095 1184 aa37.68■■■■□ 3.62
GLI4-201ENST00000340042 ARHGEF11O15085 1522 aa37.66■■■■□ 3.62
GLI4-201ENST00000340042 GAPVD1Q14C86 1478 aa37.65■■■■□ 3.62
GLI4-201ENST00000340042 MAGI1Q96QZ7 1491 aaPredicted RBP37.64■■■■□ 3.62
GLI4-201ENST00000340042 ABCA5Q8WWZ7 1642 aa37.61■■■■□ 3.61
GLI4-201ENST00000340042 PBRM1Q86U86 1689 aa37.58■■■■□ 3.61
GLI4-201ENST00000340042 CHMP7Q8WUX9 453 aaPredicted RBP37.51■■■■□ 3.6
GLI4-201ENST00000340042 SYNJ2O15056 1496 aa37.5■■■■□ 3.59
GLI4-201ENST00000340042 CYB5RLQ6IPT4 315 aa37.49■■■■□ 3.59
GLI4-201ENST00000340042 CLASP1Q7Z460 1538 aa37.32■■■■□ 3.57
GLI4-201ENST00000340042 ADAMTS12P58397 1594 aa37.29■■■■□ 3.56
GLI4-201ENST00000340042 ARAP1Q96P48 1450 aa37.28■■■■□ 3.56
GLI4-201ENST00000340042 ERICH3Q5RHP9 1530 aa37.27■■■■□ 3.56
GLI4-201ENST00000340042 GRIN2AQ12879 1464 aa37.21■■■■□ 3.55
GLI4-201ENST00000340042 FHAD1B1AJZ9 1412 aa37.19■■■■□ 3.54
GLI4-201ENST00000340042 TRHP20396 242 aaPredicted RBP37.08■■■■□ 3.53
GLI4-201ENST00000340042 NUP160Q12769 1436 aa37.06■■■■□ 3.52
GLI4-201ENST00000340042 CEP170Q5SW79 1584 aa37.04■■■■□ 3.52
GLI4-201ENST00000340042 KIF27Q86VH2 1401 aa37.04■■■■□ 3.52
GLI4-201ENST00000340042 IGF1RP08069 1367 aa36.9■■■■□ 3.5
GLI4-201ENST00000340042 CUL7Q14999 1698 aa36.86■■■■□ 3.49
GLI4-201ENST00000340042 SHROOM2Q13796 1616 aa36.81■■■■□ 3.48
GLI4-201ENST00000340042 ERCC6L2Q5T890 1561 aa36.78■■■■□ 3.48
GLI4-201ENST00000340042 RUSC2Q8N2Y8 1516 aa36.75■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms