Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
UPK1BO75841 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPK1BO75841 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
UPK1BO75841 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UPK1BO75841 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPK1BO75841 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
UPK1BO75841 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
UPK1BO75841 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
UPK1BO75841 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
UPK1BO75841 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.51■□□□□ 0.71
UPK1BO75841 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPK1BO75841 AC010542.4-201ENST00000563151 1910 ntBASIC19.51■□□□□ 0.71
UPK1BO75841 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
UPK1BO75841 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
UPK1BO75841 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UPK1BO75841 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPK1BO75841 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.51■□□□□ 0.71
UPK1BO75841 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UPK1BO75841 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
UPK1BO75841 MIR219A2-201ENST00000608502 1504 ntBASIC19.51■□□□□ 0.71
UPK1BO75841 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.5■□□□□ 0.71
UPK1BO75841 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPK1BO75841 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
UPK1BO75841 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPK1BO75841 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPK1BO75841 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPK1BO75841 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UPK1BO75841 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UPK1BO75841 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPK1BO75841 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UPK1BO75841 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UPK1BO75841 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
UPK1BO75841 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPK1BO75841 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.49■□□□□ 0.71
UPK1BO75841 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
UPK1BO75841 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
UPK1BO75841 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPK1BO75841 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UPK1BO75841 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPK1BO75841 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPK1BO75841 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UPK1BO75841 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
UPK1BO75841 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
UPK1BO75841 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPK1BO75841 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.49■□□□□ 0.71
UPK1BO75841 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
UPK1BO75841 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UPK1BO75841 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
UPK1BO75841 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.48■□□□□ 0.71
UPK1BO75841 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPK1BO75841 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPK1BO75841 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UPK1BO75841 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.48■□□□□ 0.71
UPK1BO75841 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
UPK1BO75841 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPK1BO75841 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
UPK1BO75841 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPK1BO75841 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UPK1BO75841 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPK1BO75841 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UPK1BO75841 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.47■□□□□ 0.71
UPK1BO75841 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPK1BO75841 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPK1BO75841 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPK1BO75841 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPK1BO75841 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPK1BO75841 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UPK1BO75841 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPK1BO75841 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPK1BO75841 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPK1BO75841 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.46■□□□□ 0.71
UPK1BO75841 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.46■□□□□ 0.71
UPK1BO75841 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPK1BO75841 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPK1BO75841 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPK1BO75841 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPK1BO75841 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPK1BO75841 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPK1BO75841 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPK1BO75841 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPK1BO75841 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
UPK1BO75841 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UPK1BO75841 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPK1BO75841 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPK1BO75841 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UPK1BO75841 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPK1BO75841 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.45■□□□□ 0.7
UPK1BO75841 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPK1BO75841 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPK1BO75841 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.44■□□□□ 0.7
UPK1BO75841 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.44■□□□□ 0.7
UPK1BO75841 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.44■□□□□ 0.7
UPK1BO75841 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UPK1BO75841 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPK1BO75841 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.44■□□□□ 0.7
UPK1BO75841 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
UPK1BO75841 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPK1BO75841 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPK1BO75841 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPK1BO75841 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms