RNA–Protein interactions for RNA: ENST00000310032.12

TSPAN17-202, Transcript of tetraspanin 17, humanhuman

TSL 5 BASIC

Gene TSPAN17, Length 2,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-202ENST00000310032 NISCHQ9Y2I1 1504 aa41.25■■■■■ 4.19
TSPAN17-202ENST00000310032 SHROOM4Q9ULL8 1493 aa35.13■■■■□ 3.21
TSPAN17-202ENST00000310032 CCDC180Q9P1Z9 1646 aa35.12■■■■□ 3.21
TSPAN17-202ENST00000310032 ZCCHC6Q5VYS8 1495 aaKnown RBP34.79■■■■□ 3.16
TSPAN17-202ENST00000310032 DCAF8L2P0C7V8 631 aa34.61■■■■□ 3.13
TSPAN17-202ENST00000310032 SUPT5HO00267 1087 aaKnown RBP34.16■■■■□ 3.06
TSPAN17-202ENST00000310032 DCAF1Q9Y4B6 1507 aa33.68■■■□□ 2.98
TSPAN17-202ENST00000310032 ABCC9O60706 1549 aa33.28■■■□□ 2.92
TSPAN17-202ENST00000310032 HRCP23327 699 aa33.25■■■□□ 2.91
TSPAN17-202ENST00000310032 MYO15BQ96JP2 1530 aa33.18■■■□□ 2.9
TSPAN17-202ENST00000310032 SCRIBQ14160 1630 aa33.11■■■□□ 2.89
TSPAN17-202ENST00000310032 CHIC1Q5VXU3 224 aa33.07■■■□□ 2.88
TSPAN17-202ENST00000310032 PCGF6Q9BYE7 350 aa32.86■■■□□ 2.85
TSPAN17-202ENST00000310032 PPARGC1BQ86YN6 1023 aaKnown RBP32.64■■■□□ 2.81
TSPAN17-202ENST00000310032 NACADO15069 1562 aa32.63■■■□□ 2.81
TSPAN17-202ENST00000310032 RSF1Q96T23 1441 aaPredicted RBP32.53■■■□□ 2.8
TSPAN17-202ENST00000310032 CECR2Q9BXF3 1484 aa32.38■■■□□ 2.77
TSPAN17-202ENST00000310032 LOC105371045A0A1W2PR82 267 aa32.26■■■□□ 2.75
TSPAN17-202ENST00000310032 RB1CC1Q8TDY2 1594 aa32.23■■■□□ 2.75
TSPAN17-202ENST00000310032 MROH2BQ7Z745 1585 aa32.15■■■□□ 2.74
TSPAN17-202ENST00000310032 WIZO95785 1651 aa31.94■■■□□ 2.7
TSPAN17-202ENST00000310032 TRIM26Q12899 539 aaPredicted RBP31.93■■■□□ 2.7
TSPAN17-202ENST00000310032 UNC13AQ9UPW8 1703 aa31.82■■■□□ 2.68
TSPAN17-202ENST00000310032 PABPN1Q86U42 306 aaKnown RBP eCLIP31.82■■■□□ 2.68
TSPAN17-202ENST00000310032 TRIM41Q8WV44 630 aa31.72■■■□□ 2.67
TSPAN17-202ENST00000310032 BAZ1AQ9NRL2 1556 aaPredicted RBP31.66■■■□□ 2.66
TSPAN17-202ENST00000310032 FAM9AQ8IZU1 332 aaPredicted RBP31.64■■■□□ 2.66
TSPAN17-202ENST00000310032 EHMT2Q96KQ7 1210 aa31.53■■■□□ 2.64
TSPAN17-202ENST00000310032 SMARCA4P51532 1647 aa31.51■■■□□ 2.63
TSPAN17-202ENST00000310032 BICRAQ9NZM4 1560 aa31.51■■■□□ 2.63
TSPAN17-202ENST00000310032 ZEB1P37275 1124 aaPredicted RBP31.45■■■□□ 2.62
TSPAN17-202ENST00000310032 TOP2AP11388 1531 aaKnown RBP31.31■■■□□ 2.6
TSPAN17-202ENST00000310032 CCDC88BA6NC98 1476 aa31.27■■■□□ 2.6
TSPAN17-202ENST00000310032 EIF4G1Q04637 1599 aaKnown RBP31.22■■■□□ 2.59
TSPAN17-202ENST00000310032 SMARCA2P51531 1590 aa31.19■■■□□ 2.58
TSPAN17-202ENST00000310032 SCAF1Q9H7N4 1312 aaKnown RBP31.17■■■□□ 2.58
TSPAN17-202ENST00000310032 PELP1Q8IZL8 1130 aaKnown RBP31.15■■■□□ 2.58
TSPAN17-202ENST00000310032 ABCC8Q09428 1581 aa31.12■■■□□ 2.57
TSPAN17-202ENST00000310032 ATAD2BQ9ULI0 1458 aa30.86■■■□□ 2.53
TSPAN17-202ENST00000310032 PEG3Q9GZU2 1588 aa30.83■■■□□ 2.53
TSPAN17-202ENST00000310032 SOGA1O94964 1423 aa30.74■■■□□ 2.51
TSPAN17-202ENST00000310032 BAZ1BQ9UIG0 1483 aaKnown RBP30.73■■■□□ 2.51
TSPAN17-202ENST00000310032 RUSC2Q8N2Y8 1516 aa30.66■■■□□ 2.5
TSPAN17-202ENST00000310032 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.66■■■□□ 2.5
TSPAN17-202ENST00000310032 ACIN1Q9UKV3 1341 aaKnown RBP30.56■■■□□ 2.48
TSPAN17-202ENST00000310032 CCER1Q8TC90 406 aaPredicted RBP30.56■■■□□ 2.48
TSPAN17-202ENST00000310032 WRNQ14191 1432 aaPredicted RBP eCLIP30.54■■■□□ 2.48
TSPAN17-202ENST00000310032 NEUROD1Q13562 356 aa30.53■■■□□ 2.48
TSPAN17-202ENST00000310032 SYNJ1O43426 1573 aa30.46■■■□□ 2.47
TSPAN17-202ENST00000310032 CSRNP3Q8WYN3 585 aa30.41■■■□□ 2.46
TSPAN17-202ENST00000310032 TTBK1Q5TCY1 1321 aaPredicted RBP30.35■■■□□ 2.45
TSPAN17-202ENST00000310032 DIEXFQ68CQ4 756 aaKnown RBP30.34■■■□□ 2.45
TSPAN17-202ENST00000310032 UBTFP17480 764 aaKnown RBP30.32■■■□□ 2.44
TSPAN17-202ENST00000310032 GTF3C3Q9Y5Q9 886 aa30.29■■■□□ 2.44
TSPAN17-202ENST00000310032 CEP162Q5TB80 1403 aa30.28■■■□□ 2.44
TSPAN17-202ENST00000310032 NCAPD3P42695 1498 aa30.27■■■□□ 2.44
TSPAN17-202ENST00000310032 CENPBP07199 599 aaPredicted RBP30.2■■■□□ 2.42
TSPAN17-202ENST00000310032 EEA1Q15075 1411 aa30.19■■■□□ 2.42
TSPAN17-202ENST00000310032 HMGXB3Q12766 1538 aa30.17■■■□□ 2.42
TSPAN17-202ENST00000310032 TNIKQ9UKE5 1360 aa30.17■■■□□ 2.42
TSPAN17-202ENST00000310032 GOLGA3Q08378 1498 aa30.09■■■□□ 2.41
TSPAN17-202ENST00000310032 RANGAP1P46060 587 aaPredicted RBP30.06■■■□□ 2.4
TSPAN17-202ENST00000310032 TOP2BQ02880 1626 aa30.01■■■□□ 2.39
TSPAN17-202ENST00000310032 RAPGEF2Q9Y4G8 1499 aa29.98■■■□□ 2.39
TSPAN17-202ENST00000310032 CEP164Q9UPV0 1460 aa29.96■■■□□ 2.39
TSPAN17-202ENST00000310032 CUX1P39880 1505 aa29.93■■■□□ 2.38
TSPAN17-202ENST00000310032 CFTRP13569 1480 aa29.93■■■□□ 2.38
TSPAN17-202ENST00000310032 ZNF316A6NFI3 1004 aaPredicted RBP29.89■■■□□ 2.38
TSPAN17-202ENST00000310032 KIF21BO75037 1637 aa29.87■■■□□ 2.37
TSPAN17-202ENST00000310032 BIVM-ERCC5R4GMW8 1640 aa29.87■■■□□ 2.37
TSPAN17-202ENST00000310032 CC2D2AQ9P2K1 1620 aa29.85■■■□□ 2.37
TSPAN17-202ENST00000310032 CLIP1P30622 1438 aa29.8■■■□□ 2.36
TSPAN17-202ENST00000310032 YTHDC1Q96MU7 727 aaKnown RBP29.8■■■□□ 2.36
TSPAN17-202ENST00000310032 MYT1Q01538 1121 aa29.72■■■□□ 2.35
TSPAN17-202ENST00000310032 CADPSQ9ULU8 1353 aa29.71■■■□□ 2.35
TSPAN17-202ENST00000310032 MIER1Q8N108 512 aa29.64■■■□□ 2.34
TSPAN17-202ENST00000310032 PRXQ9BXM0 1461 aa29.63■■■□□ 2.33
TSPAN17-202ENST00000310032 DNAJC5BQ9UF47 199 aa29.59■■■□□ 2.33
TSPAN17-202ENST00000310032 KIF27Q86VH2 1401 aa29.59■■■□□ 2.33
TSPAN17-202ENST00000310032 HNRNPUL2Q1KMD3 747 aaKnown RBP29.57■■■□□ 2.32
TSPAN17-202ENST00000310032 VPS8Q8N3P4 1428 aa29.56■■■□□ 2.32
TSPAN17-202ENST00000310032 NESP48681 1621 aa29.55■■■□□ 2.32
TSPAN17-202ENST00000310032 CUX2O14529 1486 aa29.5■■■□□ 2.31
TSPAN17-202ENST00000310032 PRDM2Q13029 1718 aa29.48■■■□□ 2.31
TSPAN17-202ENST00000310032 FGD5Q6ZNL6 1462 aa29.47■■■□□ 2.31
TSPAN17-202ENST00000310032 ERICH3Q5RHP9 1530 aa29.47■■■□□ 2.31
TSPAN17-202ENST00000310032 FANCD2Q9BXW9 1451 aa29.45■■■□□ 2.3
TSPAN17-202ENST00000310032 ARAP1Q96P48 1450 aa29.4■■■□□ 2.3
TSPAN17-202ENST00000310032 IGF1RP08069 1367 aa29.4■■■□□ 2.3
TSPAN17-202ENST00000310032 APLP2Q06481 763 aa29.39■■■□□ 2.29
TSPAN17-202ENST00000310032 RAD54L2Q9Y4B4 1467 aa29.33■■■□□ 2.29
TSPAN17-202ENST00000310032 KANK4Q5T7N3 995 aaPredicted RBP29.31■■■□□ 2.28
TSPAN17-202ENST00000310032 CARMIL1Q5VZK9 1371 aa29.24■■■□□ 2.27
TSPAN17-202ENST00000310032 ARHGAP35Q9NRY4 1499 aa29.24■■■□□ 2.27
TSPAN17-202ENST00000310032 TOPBP1Q92547 1522 aa29.2■■■□□ 2.26
TSPAN17-202ENST00000310032 POLA1P09884 1462 aaPredicted RBP29.19■■■□□ 2.26
TSPAN17-202ENST00000310032 DNMBPQ6XZF7 1577 aa29.14■■■□□ 2.26
TSPAN17-202ENST00000310032 P3H3Q8IVL6 736 aa29.12■■■□□ 2.25
TSPAN17-202ENST00000310032 URB2Q14146 1524 aaKnown RBP29.09■■■□□ 2.25
TSPAN17-202ENST00000310032 ABCA10Q8WWZ4 1543 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms