RNA–Protein interactions for RNA: ENST00000254730.10

EEFSEC-201, Transcript of eukaryotic elongation factor, selenocysteine-tRNA specific, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EEFSEC, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEFSEC-201ENST00000254730 NISCHQ9Y2I1 1504 aa48.33■■■■■ 5.33
EEFSEC-201ENST00000254730 CCDC180Q9P1Z9 1646 aa41.94■■■■■ 4.3
EEFSEC-201ENST00000254730 ZCCHC6Q5VYS8 1495 aaKnown RBP40.69■■■■■ 4.1
EEFSEC-201ENST00000254730 SHROOM4Q9ULL8 1493 aa39.87■■■■□ 3.97
EEFSEC-201ENST00000254730 DCAF8L2P0C7V8 631 aa39.87■■■■□ 3.97
EEFSEC-201ENST00000254730 DCAF1Q9Y4B6 1507 aa39.86■■■■□ 3.97
EEFSEC-201ENST00000254730 ABCC9O60706 1549 aa39.42■■■■□ 3.9
EEFSEC-201ENST00000254730 MYO15BQ96JP2 1530 aa39.2■■■■□ 3.87
EEFSEC-201ENST00000254730 NACADO15069 1562 aa38.92■■■■□ 3.82
EEFSEC-201ENST00000254730 SCRIBQ14160 1630 aa38.76■■■■□ 3.8
EEFSEC-201ENST00000254730 RB1CC1Q8TDY2 1594 aa38.53■■■■□ 3.76
EEFSEC-201ENST00000254730 SUPT5HO00267 1087 aaKnown RBP38.5■■■■□ 3.75
EEFSEC-201ENST00000254730 UNC13AQ9UPW8 1703 aa37.98■■■■□ 3.67
EEFSEC-201ENST00000254730 RSF1Q96T23 1441 aaPredicted RBP37.66■■■■□ 3.62
EEFSEC-201ENST00000254730 CECR2Q9BXF3 1484 aa37.62■■■■□ 3.61
EEFSEC-201ENST00000254730 BICRAQ9NZM4 1560 aa37.47■■■■□ 3.59
EEFSEC-201ENST00000254730 MROH2BQ7Z745 1585 aa37.43■■■■□ 3.58
EEFSEC-201ENST00000254730 PABPN1Q86U42 306 aaKnown RBP eCLIP37.26■■■■□ 3.56
EEFSEC-201ENST00000254730 BAZ1AQ9NRL2 1556 aaPredicted RBP37.25■■■■□ 3.55
EEFSEC-201ENST00000254730 WIZO95785 1651 aa37.2■■■■□ 3.55
EEFSEC-201ENST00000254730 SMARCA4P51532 1647 aa37.11■■■■□ 3.53
EEFSEC-201ENST00000254730 CHIC1Q5VXU3 224 aa37.01■■■■□ 3.52
EEFSEC-201ENST00000254730 TOP2AP11388 1531 aaKnown RBP36.71■■■■□ 3.47
EEFSEC-201ENST00000254730 PEG3Q9GZU2 1588 aa36.56■■■■□ 3.44
EEFSEC-201ENST00000254730 SMARCA2P51531 1590 aa36.43■■■■□ 3.42
EEFSEC-201ENST00000254730 CCDC88BA6NC98 1476 aa36.37■■■■□ 3.41
EEFSEC-201ENST00000254730 ATAD2BQ9ULI0 1458 aa36.36■■■■□ 3.41
EEFSEC-201ENST00000254730 EIF4G1Q04637 1599 aaKnown RBP36.32■■■■□ 3.41
EEFSEC-201ENST00000254730 BAZ1BQ9UIG0 1483 aaKnown RBP36.18■■■■□ 3.38
EEFSEC-201ENST00000254730 TRIM41Q8WV44 630 aa36.07■■■■□ 3.37
EEFSEC-201ENST00000254730 HMGXB3Q12766 1538 aa35.93■■■■□ 3.34
EEFSEC-201ENST00000254730 NCAPD3P42695 1498 aa35.92■■■■□ 3.34
EEFSEC-201ENST00000254730 ABCC8Q09428 1581 aa35.83■■■■□ 3.33
EEFSEC-201ENST00000254730 LOC105371045A0A1W2PR82 267 aa35.7■■■■□ 3.31
EEFSEC-201ENST00000254730 CC2D2AQ9P2K1 1620 aa35.67■■■■□ 3.3
EEFSEC-201ENST00000254730 FAM9AQ8IZU1 332 aaPredicted RBP35.56■■■■□ 3.28
EEFSEC-201ENST00000254730 WRNQ14191 1432 aaPredicted RBP eCLIP35.41■■■■□ 3.26
EEFSEC-201ENST00000254730 SYNJ1O43426 1573 aa35.36■■■■□ 3.25
EEFSEC-201ENST00000254730 CFTRP13569 1480 aa35.27■■■■□ 3.24
EEFSEC-201ENST00000254730 PRDM2Q13029 1718 aa35.22■■■■□ 3.23
EEFSEC-201ENST00000254730 SOGA1O94964 1423 aa35.19■■■■□ 3.22
EEFSEC-201ENST00000254730 EHMT2Q96KQ7 1210 aa35.13■■■■□ 3.21
EEFSEC-201ENST00000254730 TOP2BQ02880 1626 aa35.11■■■■□ 3.21
EEFSEC-201ENST00000254730 BIVM-ERCC5R4GMW8 1640 aa35.09■■■■□ 3.21
EEFSEC-201ENST00000254730 RUSC2Q8N2Y8 1516 aa35.08■■■■□ 3.21
EEFSEC-201ENST00000254730 CADPSQ9ULU8 1353 aa35.05■■■■□ 3.2
EEFSEC-201ENST00000254730 EEA1Q15075 1411 aa35.02■■■■□ 3.2
EEFSEC-201ENST00000254730 CUX1P39880 1505 aa34.96■■■■□ 3.19
EEFSEC-201ENST00000254730 CSRNP3Q8WYN3 585 aa34.86■■■■□ 3.17
EEFSEC-201ENST00000254730 NESP48681 1621 aa34.77■■■■□ 3.16
EEFSEC-201ENST00000254730 DNAJC5BQ9UF47 199 aa34.75■■■■□ 3.15
EEFSEC-201ENST00000254730 FANCD2Q9BXW9 1451 aa34.71■■■■□ 3.15
EEFSEC-201ENST00000254730 KIF21BO75037 1637 aa34.66■■■■□ 3.14
EEFSEC-201ENST00000254730 LAMC3Q9Y6N6 1575 aa34.66■■■■□ 3.14
EEFSEC-201ENST00000254730 GOLGA3Q08378 1498 aa34.65■■■■□ 3.14
EEFSEC-201ENST00000254730 TNIKQ9UKE5 1360 aa34.6■■■■□ 3.13
EEFSEC-201ENST00000254730 CEP164Q9UPV0 1460 aa34.59■■■■□ 3.13
EEFSEC-201ENST00000254730 CEP162Q5TB80 1403 aa34.5■■■■□ 3.11
EEFSEC-201ENST00000254730 FGD5Q6ZNL6 1462 aa34.5■■■■□ 3.11
EEFSEC-201ENST00000254730 UBTFP17480 764 aaKnown RBP34.49■■■■□ 3.11
EEFSEC-201ENST00000254730 DNMBPQ6XZF7 1577 aa34.48■■■■□ 3.11
EEFSEC-201ENST00000254730 KIF27Q86VH2 1401 aa34.45■■■■□ 3.11
EEFSEC-201ENST00000254730 RAPGEF2Q9Y4G8 1499 aa34.44■■■■□ 3.1
EEFSEC-201ENST00000254730 PCGF6Q9BYE7 350 aa34.44■■■■□ 3.1
EEFSEC-201ENST00000254730 TOPBP1Q92547 1522 aa34.4■■■■□ 3.1
EEFSEC-201ENST00000254730 KIF21AQ7Z4S6 1674 aa34.37■■■■□ 3.09
EEFSEC-201ENST00000254730 PRXQ9BXM0 1461 aa34.35■■■■□ 3.09
EEFSEC-201ENST00000254730 CUX2O14529 1486 aa34.34■■■■□ 3.09
EEFSEC-201ENST00000254730 PDS5BQ9NTI5 1447 aa34.34■■■■□ 3.09
EEFSEC-201ENST00000254730 ERICH3Q5RHP9 1530 aa34.31■■■■□ 3.08
EEFSEC-201ENST00000254730 URB2Q14146 1524 aaKnown RBP34.31■■■■□ 3.08
EEFSEC-201ENST00000254730 POLA1P09884 1462 aaPredicted RBP34.27■■■■□ 3.08
EEFSEC-201ENST00000254730 TRIM26Q12899 539 aaPredicted RBP34.24■■■■□ 3.07
EEFSEC-201ENST00000254730 RAD54L2Q9Y4B4 1467 aa34.21■■■■□ 3.07
EEFSEC-201ENST00000254730 ABCA10Q8WWZ4 1543 aa34.15■■■■□ 3.06
EEFSEC-201ENST00000254730 IGF1RP08069 1367 aa34.14■■■■□ 3.06
EEFSEC-201ENST00000254730 CLIP1P30622 1438 aa34.12■■■■□ 3.05
EEFSEC-201ENST00000254730 WDR97A6NE52 1622 aa34.1■■■■□ 3.05
EEFSEC-201ENST00000254730 PPARGC1BQ86YN6 1023 aaKnown RBP34.06■■■■□ 3.04
EEFSEC-201ENST00000254730 CARMIL1Q5VZK9 1371 aa33.97■■■■□ 3.03
EEFSEC-201ENST00000254730 RANGAP1P46060 587 aaPredicted RBP33.95■■■■□ 3.03
EEFSEC-201ENST00000254730 MRC2Q9UBG0 1479 aa33.94■■■■□ 3.02
EEFSEC-201ENST00000254730 ABCA5Q8WWZ7 1642 aa33.9■■■■□ 3.02
EEFSEC-201ENST00000254730 TARBP1Q13395 1621 aaKnown RBP33.88■■■■□ 3.01
EEFSEC-201ENST00000254730 VPS8Q8N3P4 1428 aa33.86■■■■□ 3.01
EEFSEC-201ENST00000254730 CUL7Q14999 1698 aa33.85■■■■□ 3.01
EEFSEC-201ENST00000254730 TDRD9Q8NDG6 1382 aaKnown RBP33.81■■■■□ 3
EEFSEC-201ENST00000254730 ARAP1Q96P48 1450 aa33.8■■■■□ 3
EEFSEC-201ENST00000254730 GAPVD1Q14C86 1478 aa33.76■■■■□ 3
EEFSEC-201ENST00000254730 WDR62O43379 1518 aa33.76■■■□□ 2.99
EEFSEC-201ENST00000254730 HRCP23327 699 aa33.73■■■□□ 2.99
EEFSEC-201ENST00000254730 TTBK1Q5TCY1 1321 aaPredicted RBP33.72■■■□□ 2.99
EEFSEC-201ENST00000254730 ARHGAP35Q9NRY4 1499 aa33.7■■■□□ 2.98
EEFSEC-201ENST00000254730 ERCC6Q03468 1493 aa33.68■■■□□ 2.98
EEFSEC-201ENST00000254730 PBRM1Q86U86 1689 aa33.65■■■□□ 2.98
EEFSEC-201ENST00000254730 THOC2Q8NI27 1593 aaKnown RBP33.63■■■□□ 2.97
EEFSEC-201ENST00000254730 CTTNBP2Q8WZ74 1663 aa33.61■■■□□ 2.97
EEFSEC-201ENST00000254730 IFT140Q96RY7 1462 aa33.55■■■□□ 2.96
EEFSEC-201ENST00000254730 AQRO60306 1485 aaKnown RBP eCLIP33.54■■■□□ 2.967e-15■■■■■ 75.7
EEFSEC-201ENST00000254730 ZNF608Q9ULD9 1512 aaPredicted RBP33.48■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms