RNA–Protein interactions for RNA: ENST00000219313.8

PSMD7-201, Transcript of proteasome 26S subunit, non-ATPase 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMD7, Length 1,670 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD7-201ENST00000219313 NISCHQ9Y2I1 1504 aa47.48■■■■■ 5.19
PSMD7-201ENST00000219313 CCDC180Q9P1Z9 1646 aa41.18■■■■■ 4.18
PSMD7-201ENST00000219313 ZCCHC6Q5VYS8 1495 aaKnown RBP40.01■■■■■ 4
PSMD7-201ENST00000219313 DCAF1Q9Y4B6 1507 aa39.28■■■■□ 3.88
PSMD7-201ENST00000219313 SHROOM4Q9ULL8 1493 aa39.09■■■■□ 3.85
PSMD7-201ENST00000219313 DCAF8L2P0C7V8 631 aa39.03■■■■□ 3.84
PSMD7-201ENST00000219313 MYO15BQ96JP2 1530 aa38.62■■■■□ 3.77
PSMD7-201ENST00000219313 ABCC9O60706 1549 aa38.48■■■■□ 3.75
PSMD7-201ENST00000219313 NACADO15069 1562 aa38.24■■■■□ 3.71
PSMD7-201ENST00000219313 SCRIBQ14160 1630 aa37.95■■■■□ 3.67
PSMD7-201ENST00000219313 SUPT5HO00267 1087 aaKnown RBP37.85■■■■□ 3.65
PSMD7-201ENST00000219313 RB1CC1Q8TDY2 1594 aa37.79■■■■□ 3.64
PSMD7-201ENST00000219313 RSF1Q96T23 1441 aaPredicted RBP37.02■■■■□ 3.52
PSMD7-201ENST00000219313 UNC13AQ9UPW8 1703 aa37■■■■□ 3.51
PSMD7-201ENST00000219313 CECR2Q9BXF3 1484 aa36.84■■■■□ 3.49
PSMD7-201ENST00000219313 MROH2BQ7Z745 1585 aa36.7■■■■□ 3.46
PSMD7-201ENST00000219313 BAZ1AQ9NRL2 1556 aaPredicted RBP36.65■■■■□ 3.46
PSMD7-201ENST00000219313 BICRAQ9NZM4 1560 aa36.61■■■■□ 3.45
PSMD7-201ENST00000219313 CHIC1Q5VXU3 224 aa36.5■■■■□ 3.43
PSMD7-201ENST00000219313 WIZO95785 1651 aa36.42■■■■□ 3.42
PSMD7-201ENST00000219313 SMARCA4P51532 1647 aa36.4■■■■□ 3.42
PSMD7-201ENST00000219313 PABPN1Q86U42 306 aaKnown RBP eCLIP36.37■■■■□ 3.41
PSMD7-201ENST00000219313 TOP2AP11388 1531 aaKnown RBP36.09■■■■□ 3.37
PSMD7-201ENST00000219313 PEG3Q9GZU2 1588 aa35.93■■■■□ 3.34
PSMD7-201ENST00000219313 SMARCA2P51531 1590 aa35.75■■■■□ 3.31
PSMD7-201ENST00000219313 CCDC88BA6NC98 1476 aa35.71■■■■□ 3.31
PSMD7-201ENST00000219313 EIF4G1Q04637 1599 aaKnown RBP35.68■■■■□ 3.3
PSMD7-201ENST00000219313 ATAD2BQ9ULI0 1458 aa35.68■■■■□ 3.3
PSMD7-201ENST00000219313 TRIM41Q8WV44 630 aa35.56■■■■□ 3.28
PSMD7-201ENST00000219313 BAZ1BQ9UIG0 1483 aaKnown RBP35.52■■■■□ 3.28
PSMD7-201ENST00000219313 HMGXB3Q12766 1538 aa35.3■■■■□ 3.24
PSMD7-201ENST00000219313 NCAPD3P42695 1498 aa35.27■■■■□ 3.24
PSMD7-201ENST00000219313 ABCC8Q09428 1581 aa35.12■■■■□ 3.21
PSMD7-201ENST00000219313 LOC105371045A0A1W2PR82 267 aa35.09■■■■□ 3.21
PSMD7-201ENST00000219313 FAM9AQ8IZU1 332 aaPredicted RBP34.92■■■■□ 3.18
PSMD7-201ENST00000219313 WRNQ14191 1432 aaPredicted RBP eCLIP34.86■■■■□ 3.17
PSMD7-201ENST00000219313 CC2D2AQ9P2K1 1620 aa34.83■■■■□ 3.17
PSMD7-201ENST00000219313 SYNJ1O43426 1573 aa34.69■■■■□ 3.14
PSMD7-201ENST00000219313 EEA1Q15075 1411 aa34.66■■■■□ 3.14
PSMD7-201ENST00000219313 CFTRP13569 1480 aa34.64■■■■□ 3.14
PSMD7-201ENST00000219313 SOGA1O94964 1423 aa34.56■■■■□ 3.12
PSMD7-201ENST00000219313 TOP2BQ02880 1626 aa34.51■■■■□ 3.11
PSMD7-201ENST00000219313 PRDM2Q13029 1718 aa34.49■■■■□ 3.11
PSMD7-201ENST00000219313 BIVM-ERCC5R4GMW8 1640 aa34.47■■■■□ 3.11
PSMD7-201ENST00000219313 CADPSQ9ULU8 1353 aa34.41■■■■□ 3.1
PSMD7-201ENST00000219313 EHMT2Q96KQ7 1210 aa34.4■■■■□ 3.1
PSMD7-201ENST00000219313 RUSC2Q8N2Y8 1516 aa34.38■■■■□ 3.09
PSMD7-201ENST00000219313 CSRNP3Q8WYN3 585 aa34.37■■■■□ 3.09
PSMD7-201ENST00000219313 CUX1P39880 1505 aa34.29■■■■□ 3.08
PSMD7-201ENST00000219313 GOLGA3Q08378 1498 aa34.2■■■■□ 3.07
PSMD7-201ENST00000219313 KIF21BO75037 1637 aa34.17■■■■□ 3.06
PSMD7-201ENST00000219313 TNIKQ9UKE5 1360 aa34.16■■■■□ 3.06
PSMD7-201ENST00000219313 CEP164Q9UPV0 1460 aa34.15■■■■□ 3.06
PSMD7-201ENST00000219313 FANCD2Q9BXW9 1451 aa34.05■■■■□ 3.04
PSMD7-201ENST00000219313 PCGF6Q9BYE7 350 aa34.05■■■■□ 3.04
PSMD7-201ENST00000219313 CEP162Q5TB80 1403 aa34.03■■■■□ 3.04
PSMD7-201ENST00000219313 LAMC3Q9Y6N6 1575 aa34.01■■■■□ 3.03
PSMD7-201ENST00000219313 UBTFP17480 764 aaKnown RBP33.98■■■■□ 3.03
PSMD7-201ENST00000219313 TRIM26Q12899 539 aaPredicted RBP33.95■■■■□ 3.03
PSMD7-201ENST00000219313 KIF27Q86VH2 1401 aa33.94■■■■□ 3.02
PSMD7-201ENST00000219313 NESP48681 1621 aa33.93■■■■□ 3.02
PSMD7-201ENST00000219313 RAPGEF2Q9Y4G8 1499 aa33.85■■■■□ 3.01
PSMD7-201ENST00000219313 ERICH3Q5RHP9 1530 aa33.85■■■■□ 3.01
PSMD7-201ENST00000219313 DNMBPQ6XZF7 1577 aa33.85■■■■□ 3.01
PSMD7-201ENST00000219313 FGD5Q6ZNL6 1462 aa33.85■■■■□ 3.01
PSMD7-201ENST00000219313 PRXQ9BXM0 1461 aa33.82■■■■□ 3
PSMD7-201ENST00000219313 PDS5BQ9NTI5 1447 aa33.74■■■□□ 2.99
PSMD7-201ENST00000219313 CUX2O14529 1486 aa33.73■■■□□ 2.99
PSMD7-201ENST00000219313 TOPBP1Q92547 1522 aa33.73■■■□□ 2.99
PSMD7-201ENST00000219313 DNAJC5BQ9UF47 199 aa33.72■■■□□ 2.99
PSMD7-201ENST00000219313 CLIP1P30622 1438 aa33.66■■■□□ 2.98
PSMD7-201ENST00000219313 POLA1P09884 1462 aaPredicted RBP33.61■■■□□ 2.97
PSMD7-201ENST00000219313 URB2Q14146 1524 aaKnown RBP33.58■■■□□ 2.97
PSMD7-201ENST00000219313 ABCA10Q8WWZ4 1543 aa33.56■■■□□ 2.96
PSMD7-201ENST00000219313 IGF1RP08069 1367 aa33.55■■■□□ 2.96
PSMD7-201ENST00000219313 KIF21AQ7Z4S6 1674 aa33.53■■■□□ 2.96
PSMD7-201ENST00000219313 HRCP23327 699 aa33.52■■■□□ 2.96
PSMD7-201ENST00000219313 RAD54L2Q9Y4B4 1467 aa33.48■■■□□ 2.95
PSMD7-201ENST00000219313 VPS8Q8N3P4 1428 aa33.44■■■□□ 2.94
PSMD7-201ENST00000219313 CARMIL1Q5VZK9 1371 aa33.41■■■□□ 2.94
PSMD7-201ENST00000219313 PPARGC1BQ86YN6 1023 aaKnown RBP33.41■■■□□ 2.94
PSMD7-201ENST00000219313 WDR97A6NE52 1622 aa33.4■■■□□ 2.94
PSMD7-201ENST00000219313 CUL7Q14999 1698 aa33.29■■■□□ 2.92
PSMD7-201ENST00000219313 MRC2Q9UBG0 1479 aa33.28■■■□□ 2.92
PSMD7-201ENST00000219313 RANGAP1P46060 587 aaPredicted RBP33.26■■■□□ 2.91
PSMD7-201ENST00000219313 ARAP1Q96P48 1450 aa33.25■■■□□ 2.91
PSMD7-201ENST00000219313 ABCA5Q8WWZ7 1642 aa33.25■■■□□ 2.91
PSMD7-201ENST00000219313 TARBP1Q13395 1621 aaKnown RBP33.17■■■□□ 2.9
PSMD7-201ENST00000219313 GAPVD1Q14C86 1478 aa33.15■■■□□ 2.9
PSMD7-201ENST00000219313 ARHGAP35Q9NRY4 1499 aa33.14■■■□□ 2.9
PSMD7-201ENST00000219313 APLP2Q06481 763 aa33.12■■■□□ 2.89
PSMD7-201ENST00000219313 TDRD9Q8NDG6 1382 aaKnown RBP33.11■■■□□ 2.89
PSMD7-201ENST00000219313 WDR62O43379 1518 aa33.08■■■□□ 2.89
PSMD7-201ENST00000219313 TTBK1Q5TCY1 1321 aaPredicted RBP33.08■■■□□ 2.89
PSMD7-201ENST00000219313 CTTNBP2Q8WZ74 1663 aa32.98■■■□□ 2.87
PSMD7-201ENST00000219313 ERCC6Q03468 1493 aa32.97■■■□□ 2.87
PSMD7-201ENST00000219313 IFT140Q96RY7 1462 aa32.96■■■□□ 2.87
PSMD7-201ENST00000219313 PBRM1Q86U86 1689 aa32.92■■■□□ 2.86
PSMD7-201ENST00000219313 EFCAB5A4FU69 1503 aa32.91■■■□□ 2.86
PSMD7-201ENST00000219313 ZEB1P37275 1124 aaPredicted RBP32.9■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms