RNA–Protein interactions for RNA: ENST00000248114.6

GFER-201, Transcript of growth factor, augmenter of liver regeneration, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GFER, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFER-201ENST00000248114 NISCHQ9Y2I1 1504 aa37.4■■■■□ 3.58
GFER-201ENST00000248114 HRCP23327 699 aa33.17■■■□□ 2.9
GFER-201ENST00000248114 SHROOM4Q9ULL8 1493 aa32.87■■■□□ 2.85
GFER-201ENST00000248114 SUPT5HO00267 1087 aaKnown RBP32.69■■■□□ 2.82
GFER-201ENST00000248114 MYO15BQ96JP2 1530 aa32.58■■■□□ 2.81
GFER-201ENST00000248114 PPARGC1BQ86YN6 1023 aaKnown RBP32.44■■■□□ 2.78
GFER-201ENST00000248114 PCGF6Q9BYE7 350 aa32.42■■■□□ 2.78
GFER-201ENST00000248114 CHIC1Q5VXU3 224 aa32.29■■■□□ 2.76
GFER-201ENST00000248114 DCAF1Q9Y4B6 1507 aa31.88■■■□□ 2.69
GFER-201ENST00000248114 ZCCHC6Q5VYS8 1495 aaKnown RBP31.85■■■□□ 2.69
GFER-201ENST00000248114 PELP1Q8IZL8 1130 aaKnown RBP31.82■■■□□ 2.68
GFER-201ENST00000248114 CCDC180Q9P1Z9 1646 aa31.51■■■□□ 2.64
GFER-201ENST00000248114 LOC105371045A0A1W2PR82 267 aa31.47■■■□□ 2.63
GFER-201ENST00000248114 TRIM26Q12899 539 aaPredicted RBP31.46■■■□□ 2.63
GFER-201ENST00000248114 SCAF1Q9H7N4 1312 aaKnown RBP31.34■■■□□ 2.61
GFER-201ENST00000248114 ZEB1P37275 1124 aaPredicted RBP31.18■■■□□ 2.58
GFER-201ENST00000248114 DCAF8L2P0C7V8 631 aa30.81■■■□□ 2.52
GFER-201ENST00000248114 ACIN1Q9UKV3 1341 aaKnown RBP30.57■■■□□ 2.49
GFER-201ENST00000248114 MYT1Q01538 1121 aa30.54■■■□□ 2.48
GFER-201ENST00000248114 NEUROD1Q13562 356 aa30.48■■■□□ 2.47
GFER-201ENST00000248114 ABCC9O60706 1549 aa30.28■■■□□ 2.44
GFER-201ENST00000248114 GTF3C3Q9Y5Q9 886 aa30.27■■■□□ 2.44
GFER-201ENST00000248114 TRIM41Q8WV44 630 aa30.27■■■□□ 2.44
GFER-201ENST00000248114 FAM9AQ8IZU1 332 aaPredicted RBP30.21■■■□□ 2.43
GFER-201ENST00000248114 CENPBP07199 599 aaPredicted RBP30.11■■■□□ 2.41
GFER-201ENST00000248114 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.08■■■□□ 2.41
GFER-201ENST00000248114 RSF1Q96T23 1441 aaPredicted RBP30.06■■■□□ 2.4
GFER-201ENST00000248114 DIEXFQ68CQ4 756 aaKnown RBP30.05■■■□□ 2.4
GFER-201ENST00000248114 EHMT2Q96KQ7 1210 aa30.01■■■□□ 2.4
GFER-201ENST00000248114 CCER1Q8TC90 406 aaPredicted RBP30■■■□□ 2.39
GFER-201ENST00000248114 RB1CC1Q8TDY2 1594 aa29.97■■■□□ 2.39
GFER-201ENST00000248114 SCRIBQ14160 1630 aa29.61■■■□□ 2.33
GFER-201ENST00000248114 ZNF316A6NFI3 1004 aaPredicted RBP29.52■■■□□ 2.32
GFER-201ENST00000248114 YTHDC1Q96MU7 727 aaKnown RBP29.48■■■□□ 2.31
GFER-201ENST00000248114 WRNQ14191 1432 aaPredicted RBP eCLIP29.39■■■□□ 2.3
GFER-201ENST00000248114 TTBK1Q5TCY1 1321 aaPredicted RBP29.32■■■□□ 2.28
GFER-201ENST00000248114 MIER1Q8N108 512 aa29.32■■■□□ 2.28
GFER-201ENST00000248114 CECR2Q9BXF3 1484 aa29.23■■■□□ 2.27
GFER-201ENST00000248114 MROH2BQ7Z745 1585 aa29.22■■■□□ 2.27
GFER-201ENST00000248114 EIF4G1Q04637 1599 aaKnown RBP29.21■■■□□ 2.27
GFER-201ENST00000248114 CEP162Q5TB80 1403 aa29.16■■■□□ 2.26
GFER-201ENST00000248114 WIZO95785 1651 aa29.15■■■□□ 2.26
GFER-201ENST00000248114 TNIKQ9UKE5 1360 aa28.99■■■□□ 2.23
GFER-201ENST00000248114 BAZ1AQ9NRL2 1556 aaPredicted RBP28.96■■■□□ 2.23
GFER-201ENST00000248114 CCDC88BA6NC98 1476 aa28.95■■■□□ 2.23
GFER-201ENST00000248114 ABCC8Q09428 1581 aa28.91■■■□□ 2.22
GFER-201ENST00000248114 SUPT16HQ9Y5B9 1047 aaKnown RBP28.88■■■□□ 2.21
GFER-201ENST00000248114 SOGA1O94964 1423 aa28.84■■■□□ 2.21
GFER-201ENST00000248114 CLSPNQ9HAW4 1339 aa28.83■■■□□ 2.21
GFER-201ENST00000248114 HNRNPUL2Q1KMD3 747 aaKnown RBP28.78■■■□□ 2.2
GFER-201ENST00000248114 ANP32EQ9BTT0 268 aa28.76■■■□□ 2.19
GFER-201ENST00000248114 TSHZ2Q9NRE2 1034 aa28.76■■■□□ 2.19
GFER-201ENST00000248114 NACADO15069 1562 aa28.72■■■□□ 2.19
GFER-201ENST00000248114 RUSC2Q8N2Y8 1516 aa28.69■■■□□ 2.18
GFER-201ENST00000248114 UBTFP17480 764 aaKnown RBP28.69■■■□□ 2.18
GFER-201ENST00000248114 CSRNP3Q8WYN3 585 aa28.68■■■□□ 2.18
GFER-201ENST00000248114 EEA1Q15075 1411 aa28.67■■■□□ 2.18
GFER-201ENST00000248114 BCL11AQ9H165 835 aa28.63■■■□□ 2.17
GFER-201ENST00000248114 GOLGA3Q08378 1498 aa28.62■■■□□ 2.17
GFER-201ENST00000248114 TOP2AP11388 1531 aaKnown RBP28.58■■■□□ 2.17
GFER-201ENST00000248114 SMARCA2P51531 1590 aa28.52■■■□□ 2.16
GFER-201ENST00000248114 VPS8Q8N3P4 1428 aa28.38■■■□□ 2.13
GFER-201ENST00000248114 CLIP1P30622 1438 aa28.37■■■□□ 2.13
GFER-201ENST00000248114 DHX57Q6P158 1386 aaKnown RBP28.36■■■□□ 2.13
GFER-201ENST00000248114 KIF21BO75037 1637 aa28.32■■■□□ 2.12
GFER-201ENST00000248114 CEP164Q9UPV0 1460 aa28.32■■■□□ 2.12
GFER-201ENST00000248114 SMARCA4P51532 1647 aa28.28■■■□□ 2.12
GFER-201ENST00000248114 APLP2Q06481 763 aa28.21■■■□□ 2.11
GFER-201ENST00000248114 KCNH8Q96L42 1107 aa28.19■■■□□ 2.1
GFER-201ENST00000248114 BCANQ96GW7 911 aa28.18■■■□□ 2.1
GFER-201ENST00000248114 BAZ1BQ9UIG0 1483 aaKnown RBP28.12■■■□□ 2.09
GFER-201ENST00000248114 SYNJ1O43426 1573 aa28.08■■■□□ 2.09
GFER-201ENST00000248114 FKBP8Q14318 412 aa28.08■■■□□ 2.09
GFER-201ENST00000248114 RAPGEF2Q9Y4G8 1499 aa28.06■■■□□ 2.08
GFER-201ENST00000248114 RBM19Q9Y4C8 960 aaKnown RBP28.05■■■□□ 2.08
GFER-201ENST00000248114 RANGAP1P46060 587 aaPredicted RBP27.96■■■□□ 2.07
GFER-201ENST00000248114 CUX2O14529 1486 aa27.93■■■□□ 2.06
GFER-201ENST00000248114 RRBP1Q9P2E9 1410 aaKnown RBP27.89■■■□□ 2.06
GFER-201ENST00000248114 KANK4Q5T7N3 995 aaPredicted RBP27.88■■■□□ 2.05
GFER-201ENST00000248114 MSH5O43196 834 aa27.85■■■□□ 2.05
GFER-201ENST00000248114 ARAP1Q96P48 1450 aa27.84■■■□□ 2.05
GFER-201ENST00000248114 NEFLP07196 543 aa27.78■■■□□ 2.04
GFER-201ENST00000248114 ITGAEP38570 1179 aa27.78■■■□□ 2.04
GFER-201ENST00000248114 MAPKBP1O60336 1514 aa27.77■■■□□ 2.04
GFER-201ENST00000248114 DDX10Q13206 875 aaKnown RBP27.74■■■□□ 2.03
GFER-201ENST00000248114 UNC13AQ9UPW8 1703 aa27.7■■■□□ 2.03
GFER-201ENST00000248114 CCNB3Q8WWL7 1395 aa27.69■■■□□ 2.02
GFER-201ENST00000248114 PPP1R15AO75807 674 aaPredicted RBP27.68■■■□□ 2.02
GFER-201ENST00000248114 WDR97A6NE52 1622 aa27.67■■■□□ 2.02
GFER-201ENST00000248114 RAB3GAP2Q9H2M9 1393 aa27.64■■■□□ 2.02
GFER-201ENST00000248114 ERICH3Q5RHP9 1530 aa27.64■■■□□ 2.02
GFER-201ENST00000248114 TRIM52Q96A61 297 aa27.63■■■□□ 2.01
GFER-201ENST00000248114 FANCIQ9NVI1 1328 aa27.61■■■□□ 2.01
GFER-201ENST00000248114 PEG3Q9GZU2 1588 aa27.6■■■□□ 2.01
GFER-201ENST00000248114 CCER2I3L3R5 266 aa27.59■■■□□ 2.01
GFER-201ENST00000248114 PRXQ9BXM0 1461 aa27.59■■■□□ 2.01
GFER-201ENST00000248114 TOP2BQ02880 1626 aa27.55■■■□□ 2
GFER-201ENST00000248114 SIN3AQ96ST3 1273 aa27.5■■□□□ 1.99
GFER-201ENST00000248114 ANP32CO43423 234 aa27.46■■□□□ 1.99
GFER-201ENST00000248114 SETD5Q9C0A6 1442 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms