RNA–Protein interactions for RNA: ENST00000600625.5

GTPBP3-222, Transcript of GTP binding protein 3, mitochondrial, human

TSL 1 (best) BASIC

Gene GTPBP3, Length 2,493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTPBP3-222	ENST00000600625	NISCH	Q9Y2I1	1504 aa		36.37	■■■■□ 3.41
GTPBP3-222	ENST00000600625	HRC	P23327	699 aa		33.11	■■■□□ 2.89
GTPBP3-222	ENST00000600625	PELP1	Q8IZL8	1130 aa	Known RBP	32.3	■■■□□ 2.76
GTPBP3-222	ENST00000600625	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.29	■■■□□ 2.76
GTPBP3-222	ENST00000600625	PCGF6	Q9BYE7	350 aa		32.27	■■■□□ 2.76
GTPBP3-222	ENST00000600625	SHROOM4	Q9ULL8	1493 aa		32.21	■■■□□ 2.75
GTPBP3-222	ENST00000600625	SUPT5H	O00267	1087 aa	Known RBP	32.21	■■■□□ 2.75
GTPBP3-222	ENST00000600625	MYO15B	Q96JP2	1530 aa		32.07	■■■□□ 2.72
GTPBP3-222	ENST00000600625	CHIC1	Q5VXU3	224 aa		31.85	■■■□□ 2.69
GTPBP3-222	ENST00000600625	DCAF1	Q9Y4B6	1507 aa		31.56	■■■□□ 2.64
GTPBP3-222	ENST00000600625	SCAF1	Q9H7N4	1312 aa	Known RBP	31.38	■■■□□ 2.61
GTPBP3-222	ENST00000600625	TRIM26	Q12899	539 aa	Predicted RBP	31.27	■■■□□ 2.6
GTPBP3-222	ENST00000600625	CCDC180	Q9P1Z9	1646 aa		31.2	■■■□□ 2.59
GTPBP3-222	ENST00000600625	ZEB1	P37275	1124 aa	Predicted RBP	31.14	■■■□□ 2.57
GTPBP3-222	ENST00000600625	MYT1	Q01538	1121 aa		31.14	■■■□□ 2.57
GTPBP3-222	ENST00000600625	LOC105371045	A0A1W2PR82	267 aa		31.06	■■■□□ 2.56
GTPBP3-222	ENST00000600625	ZCCHC6	Q5VYS8	1495 aa	Known RBP	30.99	■■■□□ 2.55
GTPBP3-222	ENST00000600625	ACIN1	Q9UKV3	1341 aa	Known RBP	30.6	■■■□□ 2.49
GTPBP3-222	ENST00000600625	NEUROD1	Q13562	356 aa		30.46	■■■□□ 2.47
GTPBP3-222	ENST00000600625	GTF3C3	Q9Y5Q9	886 aa		30.32	■■■□□ 2.44
GTPBP3-222	ENST00000600625	CENPB	P07199	599 aa	Predicted RBP	30.21	■■■□□ 2.43
GTPBP3-222	ENST00000600625	DCAF8L2	P0C7V8	631 aa		30.11	■■■□□ 2.41
GTPBP3-222	ENST00000600625	DIEXF	Q68CQ4	756 aa	Known RBP	29.97	■■■□□ 2.39
GTPBP3-222	ENST00000600625	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	29.84	■■■□□ 2.37
GTPBP3-222	ENST00000600625	CCER1	Q8TC90	406 aa	Predicted RBP	29.83	■■■□□ 2.37
GTPBP3-222	ENST00000600625	TRIM41	Q8WV44	630 aa		29.83	■■■□□ 2.37
GTPBP3-222	ENST00000600625	FAM9A	Q8IZU1	332 aa	Predicted RBP	29.75	■■■□□ 2.35
GTPBP3-222	ENST00000600625	EHMT2	Q96KQ7	1210 aa		29.56	■■■□□ 2.32
GTPBP3-222	ENST00000600625	ABCC9	O60706	1549 aa		29.49	■■■□□ 2.31
GTPBP3-222	ENST00000600625	YTHDC1	Q96MU7	727 aa	Known RBP	29.42	■■■□□ 2.3
GTPBP3-222	ENST00000600625	ZNF316	A6NFI3	1004 aa	Predicted RBP	29.37	■■■□□ 2.29
GTPBP3-222	ENST00000600625	RSF1	Q96T23	1441 aa	Predicted RBP	29.34	■■■□□ 2.29
GTPBP3-222	ENST00000600625	TTBK1	Q5TCY1	1321 aa	Predicted RBP	29.25	■■■□□ 2.27
GTPBP3-222	ENST00000600625	RB1CC1	Q8TDY2	1594 aa		29.23	■■■□□ 2.27
GTPBP3-222	ENST00000600625	MIER1	Q8N108	512 aa		29.15	■■■□□ 2.26
GTPBP3-222	ENST00000600625	BCL11A	Q9H165	835 aa		28.97	■■■□□ 2.23
GTPBP3-222	ENST00000600625	ANP32E	Q9BTT0	268 aa		28.95	■■■□□ 2.23
GTPBP3-222	ENST00000600625	WRN	Q14191	1432 aa	Predicted RBP eCLIP	28.94	■■■□□ 2.22
GTPBP3-222	ENST00000600625	CLSPN	Q9HAW4	1339 aa		28.91	■■■□□ 2.22
GTPBP3-222	ENST00000600625	SUPT16H	Q9Y5B9	1047 aa	Known RBP	28.84	■■■□□ 2.21
GTPBP3-222	ENST00000600625	TSHZ2	Q9NRE2	1034 aa		28.77	■■■□□ 2.2
GTPBP3-222	ENST00000600625	SCRIB	Q14160	1630 aa		28.72	■■■□□ 2.19
GTPBP3-222	ENST00000600625	CEP162	Q5TB80	1403 aa		28.67	■■■□□ 2.18
GTPBP3-222	ENST00000600625	CSRNP3	Q8WYN3	585 aa		28.59	■■■□□ 2.17
GTPBP3-222	ENST00000600625	TNIK	Q9UKE5	1360 aa		28.5	■■■□□ 2.15
GTPBP3-222	ENST00000600625	HNRNPUL2	Q1KMD3	747 aa	Known RBP	28.45	■■■□□ 2.14
GTPBP3-222	ENST00000600625	EIF4G1	Q04637	1599 aa	Known RBP	28.4	■■■□□ 2.14
GTPBP3-222	ENST00000600625	MROH2B	Q7Z745	1585 aa		28.4	■■■□□ 2.14
GTPBP3-222	ENST00000600625	CECR2	Q9BXF3	1484 aa		28.4	■■■□□ 2.14
GTPBP3-222	ENST00000600625	WIZ	O95785	1651 aa		28.32	■■■□□ 2.12
GTPBP3-222	ENST00000600625	CCDC88B	A6NC98	1476 aa		28.3	■■■□□ 2.12
GTPBP3-222	ENST00000600625	UBTF	P17480	764 aa	Known RBP	28.26	■■■□□ 2.11
GTPBP3-222	ENST00000600625	ABCC8	Q09428	1581 aa		28.24	■■■□□ 2.11
GTPBP3-222	ENST00000600625	SOGA1	O94964	1423 aa		28.22	■■■□□ 2.11
GTPBP3-222	ENST00000600625	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	28.17	■■■□□ 2.1
GTPBP3-222	ENST00000600625	EEA1	Q15075	1411 aa		28.15	■■■□□ 2.1
GTPBP3-222	ENST00000600625	BCAN	Q96GW7	911 aa		28.11	■■■□□ 2.09
GTPBP3-222	ENST00000600625	GOLGA3	Q08378	1498 aa		28.09	■■■□□ 2.09
GTPBP3-222	ENST00000600625	RBM19	Q9Y4C8	960 aa	Known RBP	28.08	■■■□□ 2.09
GTPBP3-222	ENST00000600625	FKBP8	Q14318	412 aa		28.02	■■■□□ 2.08
GTPBP3-222	ENST00000600625	RUSC2	Q8N2Y8	1516 aa		28.02	■■■□□ 2.08
GTPBP3-222	ENST00000600625	DHX57	Q6P158	1386 aa	Known RBP	27.98	■■■□□ 2.07
GTPBP3-222	ENST00000600625	KCNH8	Q96L42	1107 aa		27.93	■■■□□ 2.06
GTPBP3-222	ENST00000600625	NACAD	O15069	1562 aa		27.91	■■■□□ 2.06
GTPBP3-222	ENST00000600625	APLP2	Q06481	763 aa		27.91	■■■□□ 2.06
GTPBP3-222	ENST00000600625	VPS8	Q8N3P4	1428 aa		27.88	■■■□□ 2.05
GTPBP3-222	ENST00000600625	CLIP1	P30622	1438 aa		27.86	■■■□□ 2.05
GTPBP3-222	ENST00000600625	PRKCSH	P14314	528 aa	Predicted RBP	27.83	■■■□□ 2.05
GTPBP3-222	ENST00000600625	MSH5	O43196	834 aa		27.82	■■■□□ 2.04
GTPBP3-222	ENST00000600625	NEFL	P07196	543 aa		27.82	■■■□□ 2.04
GTPBP3-222	ENST00000600625	TOP2A	P11388	1531 aa	Known RBP	27.8	■■■□□ 2.04
GTPBP3-222	ENST00000600625	CEP164	Q9UPV0	1460 aa		27.78	■■■□□ 2.04
GTPBP3-222	ENST00000600625	SMARCA2	P51531	1590 aa		27.73	■■■□□ 2.03
GTPBP3-222	ENST00000600625	ITGAE	P38570	1179 aa		27.71	■■■□□ 2.03
GTPBP3-222	ENST00000600625	KIF21B	O75037	1637 aa		27.7	■■■□□ 2.03
GTPBP3-222	ENST00000600625	FANCI	Q9NVI1	1328 aa		27.65	■■■□□ 2.02
GTPBP3-222	ENST00000600625	ERICH6	Q7L0X2	663 aa		27.61	■■■□□ 2.01
GTPBP3-222	ENST00000600625	BAZ1B	Q9UIG0	1483 aa	Known RBP	27.57	■■■□□ 2
GTPBP3-222	ENST00000600625	MYT1L	Q9UL68	1186 aa		27.55	■■■□□ 2
GTPBP3-222	ENST00000600625	DDX10	Q13206	875 aa	Known RBP	27.52	■■■□□ 2
GTPBP3-222	ENST00000600625	TRIM52	Q96A61	297 aa		27.48	■■□□□ 1.99
GTPBP3-222	ENST00000600625	RANGAP1	P46060	587 aa	Predicted RBP	27.47	■■□□□ 1.99
GTPBP3-222	ENST00000600625	CUX2	O14529	1486 aa		27.47	■■□□□ 1.99
GTPBP3-222	ENST00000600625	RAPGEF2	Q9Y4G8	1499 aa		27.44	■■□□□ 1.98
GTPBP3-222	ENST00000600625	CDK11A	Q9UQ88	783 aa	Predicted RBP	27.44	■■□□□ 1.98
GTPBP3-222	ENST00000600625	CCER2	I3L3R5	266 aa		27.42	■■□□□ 1.98
GTPBP3-222	ENST00000600625	SMARCA4	P51532	1647 aa		27.42	■■□□□ 1.98
GTPBP3-222	ENST00000600625	RRBP1	Q9P2E9	1410 aa	Known RBP	27.42	■■□□□ 1.98
GTPBP3-222	ENST00000600625	DEK	P35659	375 aa	Known RBP	27.4	■■□□□ 1.98
GTPBP3-222	ENST00000600625	PPP1R15A	O75807	674 aa	Predicted RBP	27.39	■■□□□ 1.97
GTPBP3-222	ENST00000600625	KANK4	Q5T7N3	995 aa	Predicted RBP	27.38	■■□□□ 1.97
GTPBP3-222	ENST00000600625	SYNJ1	O43426	1573 aa		27.33	■■□□□ 1.97
GTPBP3-222	ENST00000600625	ANP32C	O43423	234 aa		27.31	■■□□□ 1.96
GTPBP3-222	ENST00000600625	MAPKBP1	O60336	1514 aa		27.3	■■□□□ 1.96
GTPBP3-222	ENST00000600625	CCNB3	Q8WWL7	1395 aa		27.27	■■□□□ 1.96
GTPBP3-222	ENST00000600625	WDR97	A6NE52	1622 aa		27.26	■■□□□ 1.95
GTPBP3-222	ENST00000600625	RAB3GAP2	Q9H2M9	1393 aa		27.23	■■□□□ 1.95
GTPBP3-222	ENST00000600625	ARAP1	Q96P48	1450 aa		27.23	■■□□□ 1.95
GTPBP3-222	ENST00000600625	IRX6	P78412	446 aa	Predicted RBP	27.17	■■□□□ 1.94
GTPBP3-222	ENST00000600625	ANO8	Q9HCE9	1232 aa	Predicted RBP	27.13	■■□□□ 1.93

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