RNA–Protein interactions for RNA: ENST00000006015.3

HOXA11-201, Transcript of homeobox A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA11, Length 2,295 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-201ENST00000006015 NISCHQ9Y2I1 1504 aa40.1■■■■■ 4.01
HOXA11-201ENST00000006015 CCDC180Q9P1Z9 1646 aa34.14■■■■□ 3.06
HOXA11-201ENST00000006015 SHROOM4Q9ULL8 1493 aa34.11■■■■□ 3.05
HOXA11-201ENST00000006015 ZCCHC6Q5VYS8 1495 aaKnown RBP33.83■■■■□ 3.01
HOXA11-201ENST00000006015 DCAF8L2P0C7V8 631 aa33.56■■■□□ 2.96
HOXA11-201ENST00000006015 SUPT5HO00267 1087 aaKnown RBP33.29■■■□□ 2.92
HOXA11-201ENST00000006015 HRCP23327 699 aa33.05■■■□□ 2.88
HOXA11-201ENST00000006015 DCAF1Q9Y4B6 1507 aa32.81■■■□□ 2.84
HOXA11-201ENST00000006015 MYO15BQ96JP2 1530 aa32.57■■■□□ 2.8
HOXA11-201ENST00000006015 CHIC1Q5VXU3 224 aa32.39■■■□□ 2.78
HOXA11-201ENST00000006015 PCGF6Q9BYE7 350 aa32.31■■■□□ 2.76
HOXA11-201ENST00000006015 ABCC9O60706 1549 aa32.13■■■□□ 2.73
HOXA11-201ENST00000006015 PPARGC1BQ86YN6 1023 aaKnown RBP32.1■■■□□ 2.73
HOXA11-201ENST00000006015 SCRIBQ14160 1630 aa32.1■■■□□ 2.73
HOXA11-201ENST00000006015 NACADO15069 1562 aa31.69■■■□□ 2.66
HOXA11-201ENST00000006015 PELP1Q8IZL8 1130 aaKnown RBP31.69■■■□□ 2.66
HOXA11-201ENST00000006015 RSF1Q96T23 1441 aaPredicted RBP31.65■■■□□ 2.66
HOXA11-201ENST00000006015 TRIM26Q12899 539 aaPredicted RBP31.55■■■□□ 2.64
HOXA11-201ENST00000006015 LOC105371045A0A1W2PR82 267 aa31.41■■■□□ 2.62
HOXA11-201ENST00000006015 CECR2Q9BXF3 1484 aa31.39■■■□□ 2.62
HOXA11-201ENST00000006015 ZEB1P37275 1124 aaPredicted RBP31.34■■■□□ 2.61
HOXA11-201ENST00000006015 RB1CC1Q8TDY2 1594 aa31.26■■■□□ 2.6
HOXA11-201ENST00000006015 MROH2BQ7Z745 1585 aa31.21■■■□□ 2.59
HOXA11-201ENST00000006015 WIZO95785 1651 aa31.01■■■□□ 2.56
HOXA11-201ENST00000006015 SCAF1Q9H7N4 1312 aaKnown RBP31.01■■■□□ 2.55
HOXA11-201ENST00000006015 TRIM41Q8WV44 630 aa30.98■■■□□ 2.55
HOXA11-201ENST00000006015 UNC13AQ9UPW8 1703 aa30.81■■■□□ 2.52
HOXA11-201ENST00000006015 FAM9AQ8IZU1 332 aaPredicted RBP30.8■■■□□ 2.52
HOXA11-201ENST00000006015 BAZ1AQ9NRL2 1556 aaPredicted RBP30.79■■■□□ 2.52
HOXA11-201ENST00000006015 PABPN1Q86U42 306 aaKnown RBP eCLIP30.75■■■□□ 2.51
HOXA11-201ENST00000006015 EHMT2Q96KQ7 1210 aa30.63■■■□□ 2.49
HOXA11-201ENST00000006015 SMARCA4P51532 1647 aa30.6■■■□□ 2.49
HOXA11-201ENST00000006015 BICRAQ9NZM4 1560 aa30.49■■■□□ 2.47
HOXA11-201ENST00000006015 MYT1Q01538 1121 aa30.45■■■□□ 2.47
HOXA11-201ENST00000006015 TOP2AP11388 1531 aaKnown RBP30.45■■■□□ 2.47
HOXA11-201ENST00000006015 ACIN1Q9UKV3 1341 aaKnown RBP30.43■■■□□ 2.46
HOXA11-201ENST00000006015 CCDC88BA6NC98 1476 aa30.4■■■□□ 2.46
HOXA11-201ENST00000006015 EIF4G1Q04637 1599 aaKnown RBP30.36■■■□□ 2.45
HOXA11-201ENST00000006015 SMARCA2P51531 1590 aa30.31■■■□□ 2.44
HOXA11-201ENST00000006015 NEUROD1Q13562 356 aa30.24■■■□□ 2.43
HOXA11-201ENST00000006015 ABCC8Q09428 1581 aa30.23■■■□□ 2.43
HOXA11-201ENST00000006015 CENPBP07199 599 aaPredicted RBP30.15■■■□□ 2.42
HOXA11-201ENST00000006015 CCER1Q8TC90 406 aaPredicted RBP30.06■■■□□ 2.4
HOXA11-201ENST00000006015 GTF3C3Q9Y5Q9 886 aa30.06■■■□□ 2.4
HOXA11-201ENST00000006015 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.03■■■□□ 2.4
HOXA11-201ENST00000006015 DIEXFQ68CQ4 756 aaKnown RBP30.01■■■□□ 2.39
HOXA11-201ENST00000006015 PEG3Q9GZU2 1588 aa29.98■■■□□ 2.39
HOXA11-201ENST00000006015 ATAD2BQ9ULI0 1458 aa29.94■■■□□ 2.38
HOXA11-201ENST00000006015 SOGA1O94964 1423 aa29.9■■■□□ 2.38
HOXA11-201ENST00000006015 BAZ1BQ9UIG0 1483 aaKnown RBP29.83■■■□□ 2.37
HOXA11-201ENST00000006015 RUSC2Q8N2Y8 1516 aa29.8■■■□□ 2.36
HOXA11-201ENST00000006015 WRNQ14191 1432 aaPredicted RBP eCLIP29.72■■■□□ 2.35
HOXA11-201ENST00000006015 CSRNP3Q8WYN3 585 aa29.68■■■□□ 2.34
HOXA11-201ENST00000006015 SYNJ1O43426 1573 aa29.59■■■□□ 2.33
HOXA11-201ENST00000006015 UBTFP17480 764 aaKnown RBP29.58■■■□□ 2.33
HOXA11-201ENST00000006015 ZNF316A6NFI3 1004 aaPredicted RBP29.55■■■□□ 2.32
HOXA11-201ENST00000006015 CEP162Q5TB80 1403 aa29.54■■■□□ 2.32
HOXA11-201ENST00000006015 EEA1Q15075 1411 aa29.52■■■□□ 2.32
HOXA11-201ENST00000006015 TTBK1Q5TCY1 1321 aaPredicted RBP29.51■■■□□ 2.31
HOXA11-201ENST00000006015 TNIKQ9UKE5 1360 aa29.49■■■□□ 2.31
HOXA11-201ENST00000006015 NCAPD3P42695 1498 aa29.39■■■□□ 2.29
HOXA11-201ENST00000006015 GOLGA3Q08378 1498 aa29.37■■■□□ 2.29
HOXA11-201ENST00000006015 YTHDC1Q96MU7 727 aaKnown RBP29.31■■■□□ 2.28
HOXA11-201ENST00000006015 HMGXB3Q12766 1538 aa29.29■■■□□ 2.28
HOXA11-201ENST00000006015 CEP164Q9UPV0 1460 aa29.24■■■□□ 2.27
HOXA11-201ENST00000006015 TOP2BQ02880 1626 aa29.2■■■□□ 2.27
HOXA11-201ENST00000006015 MIER1Q8N108 512 aa29.2■■■□□ 2.26
HOXA11-201ENST00000006015 RANGAP1P46060 587 aaPredicted RBP29.19■■■□□ 2.26
HOXA11-201ENST00000006015 RAPGEF2Q9Y4G8 1499 aa29.16■■■□□ 2.26
HOXA11-201ENST00000006015 KIF21BO75037 1637 aa29.15■■■□□ 2.26
HOXA11-201ENST00000006015 CFTRP13569 1480 aa29.07■■■□□ 2.24
HOXA11-201ENST00000006015 BIVM-ERCC5R4GMW8 1640 aa29.07■■■□□ 2.24
HOXA11-201ENST00000006015 CLIP1P30622 1438 aa29.07■■■□□ 2.24
HOXA11-201ENST00000006015 CUX1P39880 1505 aa29.06■■■□□ 2.24
HOXA11-201ENST00000006015 CLSPNQ9HAW4 1339 aa29.04■■■□□ 2.24
HOXA11-201ENST00000006015 CC2D2AQ9P2K1 1620 aa28.86■■■□□ 2.21
HOXA11-201ENST00000006015 VPS8Q8N3P4 1428 aa28.86■■■□□ 2.21
HOXA11-201ENST00000006015 PRXQ9BXM0 1461 aa28.86■■■□□ 2.21
HOXA11-201ENST00000006015 CADPSQ9ULU8 1353 aa28.84■■■□□ 2.21
HOXA11-201ENST00000006015 HNRNPUL2Q1KMD3 747 aaKnown RBP28.84■■■□□ 2.21
HOXA11-201ENST00000006015 KIF27Q86VH2 1401 aa28.82■■■□□ 2.2
HOXA11-201ENST00000006015 APLP2Q06481 763 aa28.77■■■□□ 2.2
HOXA11-201ENST00000006015 SUPT16HQ9Y5B9 1047 aaKnown RBP28.76■■■□□ 2.19
HOXA11-201ENST00000006015 ERICH3Q5RHP9 1530 aa28.75■■■□□ 2.19
HOXA11-201ENST00000006015 PRDM2Q13029 1718 aa28.67■■■□□ 2.18
HOXA11-201ENST00000006015 CUX2O14529 1486 aa28.66■■■□□ 2.18
HOXA11-201ENST00000006015 ARAP1Q96P48 1450 aa28.64■■■□□ 2.17
HOXA11-201ENST00000006015 FGD5Q6ZNL6 1462 aa28.6■■■□□ 2.17
HOXA11-201ENST00000006015 IGF1RP08069 1367 aa28.6■■■□□ 2.17
HOXA11-201ENST00000006015 FANCD2Q9BXW9 1451 aa28.56■■■□□ 2.16
HOXA11-201ENST00000006015 KANK4Q5T7N3 995 aaPredicted RBP28.55■■■□□ 2.16
HOXA11-201ENST00000006015 ANP32EQ9BTT0 268 aa28.55■■■□□ 2.16
HOXA11-201ENST00000006015 NESP48681 1621 aa28.55■■■□□ 2.16
HOXA11-201ENST00000006015 TSHZ2Q9NRE2 1034 aa28.54■■■□□ 2.16
HOXA11-201ENST00000006015 DHX57Q6P158 1386 aaKnown RBP28.5■■■□□ 2.15
HOXA11-201ENST00000006015 ARHGAP35Q9NRY4 1499 aa28.46■■■□□ 2.15
HOXA11-201ENST00000006015 DNAJC5BQ9UF47 199 aa28.46■■■□□ 2.15
HOXA11-201ENST00000006015 CARMIL1Q5VZK9 1371 aa28.46■■■□□ 2.15
HOXA11-201ENST00000006015 RAD54L2Q9Y4B4 1467 aa28.42■■■□□ 2.14
HOXA11-201ENST00000006015 TOPBP1Q92547 1522 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms