RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 NISCHQ9Y2I1 1504 aa53.01■■■■■ 6.08
RBFOX1-206ENST00000535565 CCDC180Q9P1Z9 1646 aa46.61■■■■■ 5.05
RBFOX1-206ENST00000535565 ZCCHC6Q5VYS8 1495 aaKnown RBP44.45■■■■■ 4.71
RBFOX1-206ENST00000535565 ABCC9O60706 1549 aa44.3■■■■■ 4.68
RBFOX1-206ENST00000535565 DCAF1Q9Y4B6 1507 aa43.91■■■■■ 4.62
RBFOX1-206ENST00000535565 DCAF8L2P0C7V8 631 aa43.82■■■■■ 4.61
RBFOX1-206ENST00000535565 MYO15BQ96JP2 1530 aa43.59■■■■■ 4.57
RBFOX1-206ENST00000535565 NACADO15069 1562 aa43.46■■■■■ 4.55
RBFOX1-206ENST00000535565 RB1CC1Q8TDY2 1594 aa43.21■■■■■ 4.51
RBFOX1-206ENST00000535565 SHROOM4Q9ULL8 1493 aa42.77■■■■■ 4.44
RBFOX1-206ENST00000535565 SCRIBQ14160 1630 aa42.66■■■■■ 4.42
RBFOX1-206ENST00000535565 UNC13AQ9UPW8 1703 aa42.33■■■■■ 4.37
RBFOX1-206ENST00000535565 BICRAQ9NZM4 1560 aa41.82■■■■■ 4.29
RBFOX1-206ENST00000535565 PABPN1Q86U42 306 aaKnown RBP eCLIP41.6■■■■■ 4.25
RBFOX1-206ENST00000535565 CECR2Q9BXF3 1484 aa41.15■■■■■ 4.18
RBFOX1-206ENST00000535565 BAZ1AQ9NRL2 1556 aaPredicted RBP41.03■■■■■ 4.16
RBFOX1-206ENST00000535565 SUPT5HO00267 1087 aaKnown RBP40.91■■■■■ 4.14
RBFOX1-206ENST00000535565 SMARCA4P51532 1647 aa40.9■■■■■ 4.14
RBFOX1-206ENST00000535565 MROH2BQ7Z745 1585 aa40.89■■■■■ 4.14
RBFOX1-206ENST00000535565 RSF1Q96T23 1441 aaPredicted RBP40.87■■■■■ 4.13
RBFOX1-206ENST00000535565 EIF4G1Q04637 1599 aaKnown RBP40.64■■■■■ 4.1
RBFOX1-206ENST00000535565 WIZO95785 1651 aa40.58■■■■■ 4.09
RBFOX1-206ENST00000535565 PEG3Q9GZU2 1588 aa40.43■■■■■ 4.06
RBFOX1-206ENST00000535565 SMARCA2P51531 1590 aa40.34■■■■■ 4.05
RBFOX1-206ENST00000535565 ATAD2BQ9ULI0 1458 aa40.29■■■■■ 4.04
RBFOX1-206ENST00000535565 TOP2AP11388 1531 aaKnown RBP40.19■■■■■ 4.02
RBFOX1-206ENST00000535565 CC2D2AQ9P2K1 1620 aa40.16■■■■■ 4.02
RBFOX1-206ENST00000535565 BAZ1BQ9UIG0 1483 aaKnown RBP40.08■■■■■ 4.01
RBFOX1-206ENST00000535565 NCAPD3P42695 1498 aa40.04■■■■■ 4
RBFOX1-206ENST00000535565 HMGXB3Q12766 1538 aa40.01■■■■■ 4
RBFOX1-206ENST00000535565 CCDC88BA6NC98 1476 aa39.69■■■■□ 3.94
RBFOX1-206ENST00000535565 DNAJC5BQ9UF47 199 aa39.37■■■■□ 3.89
RBFOX1-206ENST00000535565 CFTRP13569 1480 aa39.01■■■■□ 3.84
RBFOX1-206ENST00000535565 PRDM2Q13029 1718 aa38.98■■■■□ 3.83
RBFOX1-206ENST00000535565 CADPSQ9ULU8 1353 aa38.96■■■■□ 3.83
RBFOX1-206ENST00000535565 CHIC1Q5VXU3 224 aa38.91■■■■□ 3.82
RBFOX1-206ENST00000535565 LAMC3Q9Y6N6 1575 aa38.84■■■■□ 3.81
RBFOX1-206ENST00000535565 NESP48681 1621 aa38.72■■■■□ 3.79
RBFOX1-206ENST00000535565 ABCC8Q09428 1581 aa38.7■■■■□ 3.79
RBFOX1-206ENST00000535565 TRIM41Q8WV44 630 aa38.57■■■■□ 3.77
RBFOX1-206ENST00000535565 FANCD2Q9BXW9 1451 aa38.55■■■■□ 3.76
RBFOX1-206ENST00000535565 WRNQ14191 1432 aaPredicted RBP eCLIP38.54■■■■□ 3.76
RBFOX1-206ENST00000535565 PDS5BQ9NTI5 1447 aa38.51■■■■□ 3.76
RBFOX1-206ENST00000535565 SYNJ1O43426 1573 aa38.4■■■■□ 3.74
RBFOX1-206ENST00000535565 CEP164Q9UPV0 1460 aa38.4■■■■□ 3.74
RBFOX1-206ENST00000535565 KIF21AQ7Z4S6 1674 aa38.38■■■■□ 3.74
RBFOX1-206ENST00000535565 TOP2BQ02880 1626 aa38.34■■■■□ 3.73
RBFOX1-206ENST00000535565 BIVM-ERCC5R4GMW8 1640 aa38.34■■■■□ 3.73
RBFOX1-206ENST00000535565 CUX1P39880 1505 aa38.29■■■■□ 3.72
RBFOX1-206ENST00000535565 DNMBPQ6XZF7 1577 aa38.17■■■■□ 3.7
RBFOX1-206ENST00000535565 ERCC6Q03468 1493 aa38.12■■■■□ 3.69
RBFOX1-206ENST00000535565 TOPBP1Q92547 1522 aa38.08■■■■□ 3.69
RBFOX1-206ENST00000535565 URB2Q14146 1524 aaKnown RBP38.06■■■■□ 3.68
RBFOX1-206ENST00000535565 MRC2Q9UBG0 1479 aa38.04■■■■□ 3.68
RBFOX1-206ENST00000535565 FGD5Q6ZNL6 1462 aa37.96■■■■□ 3.67
RBFOX1-206ENST00000535565 WDR62O43379 1518 aa37.87■■■■□ 3.65
RBFOX1-206ENST00000535565 THOC2Q8NI27 1593 aaKnown RBP37.86■■■■□ 3.65
RBFOX1-206ENST00000535565 POLA1P09884 1462 aaPredicted RBP37.84■■■■□ 3.65
RBFOX1-206ENST00000535565 SOGA1O94964 1423 aa37.82■■■■□ 3.65
RBFOX1-206ENST00000535565 EEA1Q15075 1411 aa37.8■■■■□ 3.64
RBFOX1-206ENST00000535565 FAM9AQ8IZU1 332 aaPredicted RBP37.76■■■■□ 3.64
RBFOX1-206ENST00000535565 RUSC2Q8N2Y8 1516 aa37.69■■■■□ 3.62
RBFOX1-206ENST00000535565 RAD54L2Q9Y4B4 1467 aa37.66■■■■□ 3.62
RBFOX1-206ENST00000535565 ABCA10Q8WWZ4 1543 aa37.64■■■■□ 3.62
RBFOX1-206ENST00000535565 KIF27Q86VH2 1401 aa37.64■■■■□ 3.62
RBFOX1-206ENST00000535565 WDR97A6NE52 1622 aa37.63■■■■□ 3.61
RBFOX1-206ENST00000535565 CUX2O14529 1486 aa37.62■■■■□ 3.61
RBFOX1-206ENST00000535565 TARBP1Q13395 1621 aaKnown RBP37.57■■■■□ 3.6
RBFOX1-206ENST00000535565 CSRNP3Q8WYN3 585 aa37.53■■■■□ 3.6
RBFOX1-206ENST00000535565 IFT140Q96RY7 1462 aa37.5■■■■□ 3.59
RBFOX1-206ENST00000535565 ABCA5Q8WWZ7 1642 aa37.4■■■■□ 3.58
RBFOX1-206ENST00000535565 LOC105371045A0A1W2PR82 267 aa37.34■■■■□ 3.57
RBFOX1-206ENST00000535565 KIF21BO75037 1637 aa37.34■■■■□ 3.57
RBFOX1-206ENST00000535565 TDRD9Q8NDG6 1382 aaKnown RBP37.33■■■■□ 3.57
RBFOX1-206ENST00000535565 GAPVD1Q14C86 1478 aa37.31■■■■□ 3.56
RBFOX1-206ENST00000535565 IGF1RP08069 1367 aa37.26■■■■□ 3.56
RBFOX1-206ENST00000535565 PBRM1Q86U86 1689 aa37.24■■■■□ 3.55
RBFOX1-206ENST00000535565 ERICH3Q5RHP9 1530 aa37.23■■■■□ 3.55
RBFOX1-206ENST00000535565 GOLGA3Q08378 1498 aa37.22■■■■□ 3.55
RBFOX1-206ENST00000535565 PRXQ9BXM0 1461 aa37.22■■■■□ 3.55
RBFOX1-206ENST00000535565 ZNF608Q9ULD9 1512 aaPredicted RBP37.22■■■■□ 3.55
RBFOX1-206ENST00000535565 EHMT2Q96KQ7 1210 aa37.21■■■■□ 3.55
RBFOX1-206ENST00000535565 CUL7Q14999 1698 aa37.2■■■■□ 3.55
RBFOX1-206ENST00000535565 EIF4G3O43432 1585 aaKnown RBP37.2■■■■□ 3.55
RBFOX1-206ENST00000535565 AQRO60306 1485 aaKnown RBP eCLIP37.19■■■■□ 3.54
RBFOX1-206ENST00000535565 GRIN2BQ13224 1484 aa37.12■■■■□ 3.53
RBFOX1-206ENST00000535565 RAPGEF2Q9Y4G8 1499 aa37.11■■■■□ 3.53
RBFOX1-206ENST00000535565 CARMIL1Q5VZK9 1371 aa37.1■■■■□ 3.53
RBFOX1-206ENST00000535565 UBTFP17480 764 aaKnown RBP37.01■■■■□ 3.52
RBFOX1-206ENST00000535565 TNIKQ9UKE5 1360 aa36.97■■■■□ 3.51
RBFOX1-206ENST00000535565 ADAMTS12P58397 1594 aa36.95■■■■□ 3.51
RBFOX1-206ENST00000535565 FHAD1B1AJZ9 1412 aa36.91■■■■□ 3.5
RBFOX1-206ENST00000535565 SNAPC4Q5SXM2 1469 aa36.9■■■■□ 3.5
RBFOX1-206ENST00000535565 MAGI1Q96QZ7 1491 aaPredicted RBP36.88■■■■□ 3.5
RBFOX1-206ENST00000535565 CTTNBP2Q8WZ74 1663 aa36.73■■■■□ 3.47
RBFOX1-206ENST00000535565 CEP162Q5TB80 1403 aa36.73■■■■□ 3.47
RBFOX1-206ENST00000535565 SYNJ2O15056 1496 aa36.72■■■■□ 3.47
RBFOX1-206ENST00000535565 GRIN2AQ12879 1464 aa36.65■■■■□ 3.46
RBFOX1-206ENST00000535565 CHMP7Q8WUX9 453 aaPredicted RBP36.61■■■■□ 3.45
RBFOX1-206ENST00000535565 CLIP1P30622 1438 aa36.57■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms