RNA–Protein interactions for RNA: ENST00000311481.10

RAB1B-201, Transcript of RAB1B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB1B, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1B-201ENST00000311481 NISCHQ9Y2I1 1504 aa43.63■■■■■ 4.58
RAB1B-201ENST00000311481 CCDC180Q9P1Z9 1646 aa37.4■■■■□ 3.58
RAB1B-201ENST00000311481 ZCCHC6Q5VYS8 1495 aaKnown RBP36.9■■■■□ 3.5
RAB1B-201ENST00000311481 SHROOM4Q9ULL8 1493 aa36.6■■■■□ 3.45
RAB1B-201ENST00000311481 DCAF1Q9Y4B6 1507 aa36.01■■■■□ 3.35
RAB1B-201ENST00000311481 SUPT5HO00267 1087 aaKnown RBP35.8■■■■□ 3.32
RAB1B-201ENST00000311481 DCAF8L2P0C7V8 631 aa35.73■■■■□ 3.31
RAB1B-201ENST00000311481 ABCC9O60706 1549 aa35.53■■■■□ 3.28
RAB1B-201ENST00000311481 MYO15BQ96JP2 1530 aa35.09■■■■□ 3.21
RAB1B-201ENST00000311481 CHIC1Q5VXU3 224 aa34.91■■■■□ 3.18
RAB1B-201ENST00000311481 SCRIBQ14160 1630 aa34.68■■■■□ 3.14
RAB1B-201ENST00000311481 NACADO15069 1562 aa34.55■■■■□ 3.12
RAB1B-201ENST00000311481 RSF1Q96T23 1441 aaPredicted RBP34.36■■■■□ 3.09
RAB1B-201ENST00000311481 RB1CC1Q8TDY2 1594 aa34.28■■■■□ 3.08
RAB1B-201ENST00000311481 CECR2Q9BXF3 1484 aa33.89■■■■□ 3.02
RAB1B-201ENST00000311481 MROH2BQ7Z745 1585 aa33.82■■■■□ 3
RAB1B-201ENST00000311481 LOC105371045A0A1W2PR82 267 aa33.69■■■□□ 2.98
RAB1B-201ENST00000311481 WIZO95785 1651 aa33.63■■■□□ 2.97
RAB1B-201ENST00000311481 UNC13AQ9UPW8 1703 aa33.61■■■□□ 2.97
RAB1B-201ENST00000311481 BAZ1AQ9NRL2 1556 aaPredicted RBP33.55■■■□□ 2.96
RAB1B-201ENST00000311481 TRIM41Q8WV44 630 aa33.51■■■□□ 2.95
RAB1B-201ENST00000311481 PABPN1Q86U42 306 aaKnown RBP eCLIP33.47■■■□□ 2.95
RAB1B-201ENST00000311481 HRCP23327 699 aa33.45■■■□□ 2.95
RAB1B-201ENST00000311481 PCGF6Q9BYE7 350 aa33.42■■■□□ 2.94
RAB1B-201ENST00000311481 BICRAQ9NZM4 1560 aa33.34■■■□□ 2.93
RAB1B-201ENST00000311481 SMARCA4P51532 1647 aa33.29■■■□□ 2.92
RAB1B-201ENST00000311481 EIF4G1Q04637 1599 aaKnown RBP33.24■■■□□ 2.91
RAB1B-201ENST00000311481 TOP2AP11388 1531 aaKnown RBP33.22■■■□□ 2.91
RAB1B-201ENST00000311481 TRIM26Q12899 539 aaPredicted RBP33.05■■■□□ 2.88
RAB1B-201ENST00000311481 FAM9AQ8IZU1 332 aaPredicted RBP33.02■■■□□ 2.88
RAB1B-201ENST00000311481 SMARCA2P51531 1590 aa32.99■■■□□ 2.87
RAB1B-201ENST00000311481 CCDC88BA6NC98 1476 aa32.97■■■□□ 2.87
RAB1B-201ENST00000311481 PEG3Q9GZU2 1588 aa32.79■■■□□ 2.84
RAB1B-201ENST00000311481 ABCC8Q09428 1581 aa32.7■■■□□ 2.83
RAB1B-201ENST00000311481 PPARGC1BQ86YN6 1023 aaKnown RBP32.55■■■□□ 2.8
RAB1B-201ENST00000311481 EHMT2Q96KQ7 1210 aa32.55■■■□□ 2.8
RAB1B-201ENST00000311481 ATAD2BQ9ULI0 1458 aa32.44■■■□□ 2.78
RAB1B-201ENST00000311481 EEA1Q15075 1411 aa32.41■■■□□ 2.78
RAB1B-201ENST00000311481 SOGA1O94964 1423 aa32.35■■■□□ 2.77
RAB1B-201ENST00000311481 ZEB1P37275 1124 aaPredicted RBP32.33■■■□□ 2.77
RAB1B-201ENST00000311481 BAZ1BQ9UIG0 1483 aaKnown RBP32.31■■■□□ 2.76
RAB1B-201ENST00000311481 WRNQ14191 1432 aaPredicted RBP eCLIP32.27■■■□□ 2.76
RAB1B-201ENST00000311481 TNIKQ9UKE5 1360 aa32.22■■■□□ 2.75
RAB1B-201ENST00000311481 CSRNP3Q8WYN3 585 aa32.19■■■□□ 2.74
RAB1B-201ENST00000311481 RUSC2Q8N2Y8 1516 aa32.18■■■□□ 2.74
RAB1B-201ENST00000311481 CEP162Q5TB80 1403 aa32.16■■■□□ 2.74
RAB1B-201ENST00000311481 SYNJ1O43426 1573 aa32.14■■■□□ 2.74
RAB1B-201ENST00000311481 GOLGA3Q08378 1498 aa32.06■■■□□ 2.72
RAB1B-201ENST00000311481 CC2D2AQ9P2K1 1620 aa32.06■■■□□ 2.72
RAB1B-201ENST00000311481 DNAJC5BQ9UF47 199 aa31.99■■■□□ 2.71
RAB1B-201ENST00000311481 KIF21BO75037 1637 aa31.97■■■□□ 2.71
RAB1B-201ENST00000311481 HMGXB3Q12766 1538 aa31.95■■■□□ 2.7
RAB1B-201ENST00000311481 CEP164Q9UPV0 1460 aa31.92■■■□□ 2.7
RAB1B-201ENST00000311481 NCAPD3P42695 1498 aa31.92■■■□□ 2.7
RAB1B-201ENST00000311481 UBTFP17480 764 aaKnown RBP31.9■■■□□ 2.7
RAB1B-201ENST00000311481 TOP2BQ02880 1626 aa31.86■■■□□ 2.69
RAB1B-201ENST00000311481 BIVM-ERCC5R4GMW8 1640 aa31.81■■■□□ 2.68
RAB1B-201ENST00000311481 RAPGEF2Q9Y4G8 1499 aa31.61■■■□□ 2.65
RAB1B-201ENST00000311481 CLIP1P30622 1438 aa31.61■■■□□ 2.65
RAB1B-201ENST00000311481 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.58■■■□□ 2.65
RAB1B-201ENST00000311481 CFTRP13569 1480 aa31.56■■■□□ 2.64
RAB1B-201ENST00000311481 CCER1Q8TC90 406 aaPredicted RBP31.54■■■□□ 2.64
RAB1B-201ENST00000311481 CUX1P39880 1505 aa31.53■■■□□ 2.64
RAB1B-201ENST00000311481 VPS8Q8N3P4 1428 aa31.51■■■□□ 2.63
RAB1B-201ENST00000311481 ERICH3Q5RHP9 1530 aa31.51■■■□□ 2.63
RAB1B-201ENST00000311481 TTBK1Q5TCY1 1321 aaPredicted RBP31.49■■■□□ 2.63
RAB1B-201ENST00000311481 PRDM2Q13029 1718 aa31.47■■■□□ 2.63
RAB1B-201ENST00000311481 PRXQ9BXM0 1461 aa31.46■■■□□ 2.63
RAB1B-201ENST00000311481 KIF27Q86VH2 1401 aa31.33■■■□□ 2.61
RAB1B-201ENST00000311481 CADPSQ9ULU8 1353 aa31.21■■■□□ 2.59
RAB1B-201ENST00000311481 APLP2Q06481 763 aa31.2■■■□□ 2.58
RAB1B-201ENST00000311481 ARAP1Q96P48 1450 aa31.18■■■□□ 2.58
RAB1B-201ENST00000311481 RANGAP1P46060 587 aaPredicted RBP31.08■■■□□ 2.57
RAB1B-201ENST00000311481 NESP48681 1621 aa31.02■■■□□ 2.56
RAB1B-201ENST00000311481 CUX2O14529 1486 aa31.01■■■□□ 2.55
RAB1B-201ENST00000311481 HNRNPUL2Q1KMD3 747 aaKnown RBP31■■■□□ 2.55
RAB1B-201ENST00000311481 IGF1RP08069 1367 aa30.98■■■□□ 2.55
RAB1B-201ENST00000311481 FGD5Q6ZNL6 1462 aa30.97■■■□□ 2.55
RAB1B-201ENST00000311481 ARHGAP35Q9NRY4 1499 aa30.94■■■□□ 2.54
RAB1B-201ENST00000311481 FANCD2Q9BXW9 1451 aa30.88■■■□□ 2.53
RAB1B-201ENST00000311481 DIEXFQ68CQ4 756 aaKnown RBP30.83■■■□□ 2.53
RAB1B-201ENST00000311481 CARMIL1Q5VZK9 1371 aa30.83■■■□□ 2.53
RAB1B-201ENST00000311481 KANK4Q5T7N3 995 aaPredicted RBP30.81■■■□□ 2.52
RAB1B-201ENST00000311481 DNMBPQ6XZF7 1577 aa30.81■■■□□ 2.52
RAB1B-201ENST00000311481 LAMC3Q9Y6N6 1575 aa30.8■■■□□ 2.52
RAB1B-201ENST00000311481 RRBP1Q9P2E9 1410 aaKnown RBP30.78■■■□□ 2.52
RAB1B-201ENST00000311481 ZNF316A6NFI3 1004 aaPredicted RBP30.75■■■□□ 2.51
RAB1B-201ENST00000311481 MAP3K1Q13233 1512 aa30.72■■■□□ 2.51
RAB1B-201ENST00000311481 ABCA10Q8WWZ4 1543 aa30.7■■■□□ 2.5
RAB1B-201ENST00000311481 TOPBP1Q92547 1522 aa30.7■■■□□ 2.5
RAB1B-201ENST00000311481 CLSPNQ9HAW4 1339 aa30.66■■■□□ 2.5
RAB1B-201ENST00000311481 POLA1P09884 1462 aaPredicted RBP30.64■■■□□ 2.49
RAB1B-201ENST00000311481 TIAM1Q13009 1591 aa30.62■■■□□ 2.49
RAB1B-201ENST00000311481 PDS5BQ9NTI5 1447 aa30.62■■■□□ 2.49
RAB1B-201ENST00000311481 RAD54L2Q9Y4B4 1467 aa30.6■■■□□ 2.49
RAB1B-201ENST00000311481 DHX57Q6P158 1386 aaKnown RBP30.58■■■□□ 2.49
RAB1B-201ENST00000311481 CCNB3Q8WWL7 1395 aa30.58■■■□□ 2.49
RAB1B-201ENST00000311481 CUL7Q14999 1698 aa30.56■■■□□ 2.48
RAB1B-201ENST00000311481 SCAF1Q9H7N4 1312 aaKnown RBP30.56■■■□□ 2.48
RAB1B-201ENST00000311481 KIF21AQ7Z4S6 1674 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms