Protein–RNA interactions for Protein: Q9NQV5

PRDM11, PR domain-containing protein 11, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM11Q9NQV5 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC38.35■■■■□ 3.73
PRDM11Q9NQV5 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC38.35■■■■□ 3.73
PRDM11Q9NQV5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC38.34■■■■□ 3.73
PRDM11Q9NQV5 AL133380.1-201ENST00000506013 324 ntBASIC38.32■■■■□ 3.72
PRDM11Q9NQV5 HNRNPLP2-201ENST00000568980 1570 ntBASIC38.31■■■■□ 3.72
PRDM11Q9NQV5 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
PRDM11Q9NQV5 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC38.26■■■■□ 3.71
PRDM11Q9NQV5 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC38.25■■■■□ 3.71
PRDM11Q9NQV5 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC38.25■■■■□ 3.71
PRDM11Q9NQV5 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
PRDM11Q9NQV5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC38.23■■■■□ 3.71
PRDM11Q9NQV5 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
PRDM11Q9NQV5 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC38.21■■■■□ 3.71
PRDM11Q9NQV5 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC38.19■■■■□ 3.7
PRDM11Q9NQV5 MIR7108-201ENST00000614319 87 ntBASIC38.18■■■■□ 3.7
PRDM11Q9NQV5 ABHD17AP4-201ENST00000411545 909 ntBASIC38.15■■■■□ 3.7
PRDM11Q9NQV5 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC38.14■■■■□ 3.7
PRDM11Q9NQV5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC38.14■■■■□ 3.7
PRDM11Q9NQV5 EBPL-202ENST00000378268 680 ntTSL 3 BASIC38.13■■■■□ 3.69
PRDM11Q9NQV5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC38.13■■■■□ 3.69
PRDM11Q9NQV5 MIR3665-201ENST00000578708 105 ntBASIC38.13■■■■□ 3.69
PRDM11Q9NQV5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC38.12■■■■□ 3.69
PRDM11Q9NQV5 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC38.09■■■■□ 3.69
PRDM11Q9NQV5 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
PRDM11Q9NQV5 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC38.04■■■■□ 3.68
PRDM11Q9NQV5 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
PRDM11Q9NQV5 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC38.04■■■■□ 3.68
PRDM11Q9NQV5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC38.01■■■■□ 3.68
PRDM11Q9NQV5 AC087741.3-201ENST00000624270 1347 ntBASIC38■■■■□ 3.67
PRDM11Q9NQV5 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
PRDM11Q9NQV5 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC37.99■■■■□ 3.67
PRDM11Q9NQV5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC37.98■■■■□ 3.67
PRDM11Q9NQV5 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC37.97■■■■□ 3.67
PRDM11Q9NQV5 MLEC-202ENST00000412616 841 ntTSL 3 BASIC37.97■■■■□ 3.67
PRDM11Q9NQV5 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC37.96■■■■□ 3.67
PRDM11Q9NQV5 DUX4L28-201ENST00000623687 678 ntBASIC37.96■■■■□ 3.67
PRDM11Q9NQV5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC37.95■■■■□ 3.67
PRDM11Q9NQV5 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC37.94■■■■□ 3.66
PRDM11Q9NQV5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC37.94■■■■□ 3.66
PRDM11Q9NQV5 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC37.91■■■■□ 3.66
PRDM11Q9NQV5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC37.91■■■■□ 3.66
PRDM11Q9NQV5 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
PRDM11Q9NQV5 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC37.84■■■■□ 3.65
PRDM11Q9NQV5 CHML-205ENST00000638160 705 ntTSL 3 BASIC37.84■■■■□ 3.65
PRDM11Q9NQV5 AC044849.2-201ENST00000606596 710 ntBASIC37.83■■■■□ 3.65
PRDM11Q9NQV5 MIR762-201ENST00000390236 83 ntBASIC37.81■■■■□ 3.64
PRDM11Q9NQV5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC37.81■■■■□ 3.64
PRDM11Q9NQV5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC37.81■■■■□ 3.64
PRDM11Q9NQV5 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
PRDM11Q9NQV5 HLA-V-202ENST00000446817 847 ntBASIC37.8■■■■□ 3.64
PRDM11Q9NQV5 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
PRDM11Q9NQV5 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC37.76■■■■□ 3.64
PRDM11Q9NQV5 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
PRDM11Q9NQV5 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC37.74■■■■□ 3.63
PRDM11Q9NQV5 AC005559.1-201ENST00000589661 871 ntBASIC37.74■■■■□ 3.63
PRDM11Q9NQV5 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC37.7■■■■□ 3.63
PRDM11Q9NQV5 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC37.7■■■■□ 3.63
PRDM11Q9NQV5 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC37.7■■■■□ 3.63
PRDM11Q9NQV5 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC37.7■■■■□ 3.63
PRDM11Q9NQV5 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC37.68■■■■□ 3.62
PRDM11Q9NQV5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC37.65■■■■□ 3.62
PRDM11Q9NQV5 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC37.64■■■■□ 3.62
PRDM11Q9NQV5 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.61
PRDM11Q9NQV5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC37.61■■■■□ 3.61
PRDM11Q9NQV5 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC37.61■■■■□ 3.61
PRDM11Q9NQV5 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC37.6■■■■□ 3.61
PRDM11Q9NQV5 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC37.58■■■■□ 3.61
PRDM11Q9NQV5 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.61
PRDM11Q9NQV5 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC37.56■■■■□ 3.6
PRDM11Q9NQV5 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC37.55■■■■□ 3.6
PRDM11Q9NQV5 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC37.55■■■■□ 3.6
PRDM11Q9NQV5 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC37.54■■■■□ 3.6
PRDM11Q9NQV5 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC37.52■■■■□ 3.6
PRDM11Q9NQV5 ZNRF2P2-203ENST00000454624 420 ntBASIC37.52■■■■□ 3.6
PRDM11Q9NQV5 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC37.52■■■■□ 3.6
PRDM11Q9NQV5 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC37.51■■■■□ 3.6
PRDM11Q9NQV5 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC37.48■■■■□ 3.59
PRDM11Q9NQV5 BOD1-206ENST00000480951 814 ntTSL 2 BASIC37.48■■■■□ 3.59
PRDM11Q9NQV5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC37.48■■■■□ 3.59
PRDM11Q9NQV5 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
PRDM11Q9NQV5 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC37.47■■■■□ 3.59
PRDM11Q9NQV5 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
PRDM11Q9NQV5 DENR-202ENST00000455982 1052 ntTSL 5 BASIC37.46■■■■□ 3.59
PRDM11Q9NQV5 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
PRDM11Q9NQV5 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.59
PRDM11Q9NQV5 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC37.45■■■■□ 3.59
PRDM11Q9NQV5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC37.44■■■■□ 3.58
PRDM11Q9NQV5 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
PRDM11Q9NQV5 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC37.42■■■■□ 3.58
PRDM11Q9NQV5 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC37.42■■■■□ 3.58
PRDM11Q9NQV5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC37.42■■■■□ 3.58
PRDM11Q9NQV5 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC37.39■■■■□ 3.58
PRDM11Q9NQV5 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
PRDM11Q9NQV5 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
PRDM11Q9NQV5 HGH1-207ENST00000628266 258 ntTSL 5 BASIC37.33■■■■□ 3.57
PRDM11Q9NQV5 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC37.32■■■■□ 3.57
PRDM11Q9NQV5 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC37.31■■■■□ 3.56
PRDM11Q9NQV5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
PRDM11Q9NQV5 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC37.3■■■■□ 3.56
PRDM11Q9NQV5 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC37.28■■■■□ 3.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms