Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC27.41■■□□□ 1.98
CHD8Q9HCK8 AC087741.3-201ENST00000624270 1347 ntBASIC27.41■■□□□ 1.98
CHD8Q9HCK8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.4■■□□□ 1.98
CHD8Q9HCK8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CHD8Q9HCK8 MIR4449-201ENST00000578365 66 ntBASIC27.39■■□□□ 1.97
CHD8Q9HCK8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CHD8Q9HCK8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
CHD8Q9HCK8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.31■■□□□ 1.96
CHD8Q9HCK8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.3■■□□□ 1.96
CHD8Q9HCK8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CHD8Q9HCK8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.29■■□□□ 1.96
CHD8Q9HCK8 AC044849.2-201ENST00000606596 710 ntBASIC27.29■■□□□ 1.96
CHD8Q9HCK8 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC27.27■■□□□ 1.96
CHD8Q9HCK8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
CHD8Q9HCK8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.23■■□□□ 1.95
CHD8Q9HCK8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
CHD8Q9HCK8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CHD8Q9HCK8 DUX4L28-201ENST00000623687 678 ntBASIC27.23■■□□□ 1.95
CHD8Q9HCK8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.21■■□□□ 1.95
CHD8Q9HCK8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.2■■□□□ 1.95
CHD8Q9HCK8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.2■■□□□ 1.95
CHD8Q9HCK8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.2■■□□□ 1.95
CHD8Q9HCK8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
CHD8Q9HCK8 HSD17B1P1-201ENST00000590052 955 ntBASIC27.19■■□□□ 1.94
CHD8Q9HCK8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.18■■□□□ 1.94
CHD8Q9HCK8 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC27.17■■□□□ 1.94
CHD8Q9HCK8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
CHD8Q9HCK8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.16■■□□□ 1.94
CHD8Q9HCK8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHD8Q9HCK8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.16■■□□□ 1.94
CHD8Q9HCK8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CHD8Q9HCK8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CHD8Q9HCK8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
CHD8Q9HCK8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.07■■□□□ 1.92
CHD8Q9HCK8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CHD8Q9HCK8 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
CHD8Q9HCK8 MIR762-201ENST00000390236 83 ntBASIC27.03■■□□□ 1.92
CHD8Q9HCK8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
CHD8Q9HCK8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CHD8Q9HCK8 AC005559.1-201ENST00000589661 871 ntBASIC27.01■■□□□ 1.91
CHD8Q9HCK8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27■■□□□ 1.91
CHD8Q9HCK8 MIR639-201ENST00000384974 98 ntBASIC26.99■■□□□ 1.91
CHD8Q9HCK8 ZNRF2P2-203ENST00000454624 420 ntBASIC26.99■■□□□ 1.91
CHD8Q9HCK8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CHD8Q9HCK8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.98■■□□□ 1.91
CHD8Q9HCK8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
CHD8Q9HCK8 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
CHD8Q9HCK8 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
CHD8Q9HCK8 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.95■■□□□ 1.9
CHD8Q9HCK8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CHD8Q9HCK8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CHD8Q9HCK8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CHD8Q9HCK8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.94■■□□□ 1.9
CHD8Q9HCK8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.94■■□□□ 1.9
CHD8Q9HCK8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CHD8Q9HCK8 AL133380.1-201ENST00000506013 324 ntBASIC26.92■■□□□ 1.9
CHD8Q9HCK8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
CHD8Q9HCK8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.91■■□□□ 1.9
CHD8Q9HCK8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CHD8Q9HCK8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.88■■□□□ 1.89
CHD8Q9HCK8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.86■■□□□ 1.89
CHD8Q9HCK8 AC145285.7-201ENST00000614819 1539 ntBASIC26.82■■□□□ 1.88
CHD8Q9HCK8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CHD8Q9HCK8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
CHD8Q9HCK8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.8■■□□□ 1.88
CHD8Q9HCK8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CHD8Q9HCK8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.79■■□□□ 1.88
CHD8Q9HCK8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.78■■□□□ 1.88
CHD8Q9HCK8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CHD8Q9HCK8 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC26.73■■□□□ 1.87
CHD8Q9HCK8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.72■■□□□ 1.87
CHD8Q9HCK8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.71■■□□□ 1.87
CHD8Q9HCK8 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.7■■□□□ 1.87
CHD8Q9HCK8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.69■■□□□ 1.86
CHD8Q9HCK8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
CHD8Q9HCK8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CHD8Q9HCK8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.67■■□□□ 1.86
CHD8Q9HCK8 MIR3648-2-201ENST00000581792 180 ntBASIC26.67■■□□□ 1.86
CHD8Q9HCK8 MIR3648-1-201ENST00000615959 180 ntBASIC26.67■■□□□ 1.86
CHD8Q9HCK8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHD8Q9HCK8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CHD8Q9HCK8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.66■■□□□ 1.86
CHD8Q9HCK8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHD8Q9HCK8 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.65■■□□□ 1.86
CHD8Q9HCK8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHD8Q9HCK8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.64■■□□□ 1.86
CHD8Q9HCK8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHD8Q9HCK8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CHD8Q9HCK8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.6■■□□□ 1.85
CHD8Q9HCK8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CHD8Q9HCK8 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CHD8Q9HCK8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.6■■□□□ 1.85
CHD8Q9HCK8 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.6■■□□□ 1.85
CHD8Q9HCK8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
CHD8Q9HCK8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CHD8Q9HCK8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.58■■□□□ 1.85
CHD8Q9HCK8 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.58■■□□□ 1.85
CHD8Q9HCK8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CHD8Q9HCK8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.57■■□□□ 1.84
CHD8Q9HCK8 AC016575.1-201ENST00000607026 382 ntBASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms