Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SND1-IT1Q9HBX3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SND1-IT1Q9HBX3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SND1-IT1Q9HBX3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SND1-IT1Q9HBX3 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SND1-IT1Q9HBX3 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SND1-IT1Q9HBX3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SND1-IT1Q9HBX3 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC18.5■□□□□ 0.55
SND1-IT1Q9HBX3 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SND1-IT1Q9HBX3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SND1-IT1Q9HBX3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SND1-IT1Q9HBX3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC18.47■□□□□ 0.55
SND1-IT1Q9HBX3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SND1-IT1Q9HBX3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SND1-IT1Q9HBX3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SND1-IT1Q9HBX3 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC18.45■□□□□ 0.54
SND1-IT1Q9HBX3 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SND1-IT1Q9HBX3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SND1-IT1Q9HBX3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SND1-IT1Q9HBX3 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SND1-IT1Q9HBX3 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SND1-IT1Q9HBX3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SND1-IT1Q9HBX3 INO80B-203ENST00000409917 796 ntTSL 2 BASIC18.43■□□□□ 0.54
SND1-IT1Q9HBX3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SND1-IT1Q9HBX3 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SND1-IT1Q9HBX3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SND1-IT1Q9HBX3 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC18.41■□□□□ 0.54
SND1-IT1Q9HBX3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SND1-IT1Q9HBX3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SND1-IT1Q9HBX3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SND1-IT1Q9HBX3 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SND1-IT1Q9HBX3 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC18.36■□□□□ 0.53
SND1-IT1Q9HBX3 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SND1-IT1Q9HBX3 ABCB10P1-201ENST00000614297 2181 ntBASIC18.34■□□□□ 0.53
SND1-IT1Q9HBX3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SND1-IT1Q9HBX3 AC015813.7-201ENST00000623294 581 ntBASIC18.33■□□□□ 0.52
SND1-IT1Q9HBX3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SND1-IT1Q9HBX3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SND1-IT1Q9HBX3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SND1-IT1Q9HBX3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SND1-IT1Q9HBX3 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SND1-IT1Q9HBX3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SND1-IT1Q9HBX3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SND1-IT1Q9HBX3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SND1-IT1Q9HBX3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SND1-IT1Q9HBX3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SND1-IT1Q9HBX3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SND1-IT1Q9HBX3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SND1-IT1Q9HBX3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SND1-IT1Q9HBX3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SND1-IT1Q9HBX3 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC18.27■□□□□ 0.52
SND1-IT1Q9HBX3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.27■□□□□ 0.52
SND1-IT1Q9HBX3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SND1-IT1Q9HBX3 ABCB10P3-201ENST00000561950 2166 ntBASIC18.27■□□□□ 0.51
SND1-IT1Q9HBX3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SND1-IT1Q9HBX3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.26■□□□□ 0.51
SND1-IT1Q9HBX3 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SND1-IT1Q9HBX3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.26■□□□□ 0.51
SND1-IT1Q9HBX3 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SND1-IT1Q9HBX3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SND1-IT1Q9HBX3 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SND1-IT1Q9HBX3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SND1-IT1Q9HBX3 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SND1-IT1Q9HBX3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SND1-IT1Q9HBX3 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC18.22■□□□□ 0.51
SND1-IT1Q9HBX3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SND1-IT1Q9HBX3 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SND1-IT1Q9HBX3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SND1-IT1Q9HBX3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.5
SND1-IT1Q9HBX3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
SND1-IT1Q9HBX3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SND1-IT1Q9HBX3 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SND1-IT1Q9HBX3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SND1-IT1Q9HBX3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SND1-IT1Q9HBX3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SND1-IT1Q9HBX3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SND1-IT1Q9HBX3 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SND1-IT1Q9HBX3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SND1-IT1Q9HBX3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SND1-IT1Q9HBX3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.18■□□□□ 0.5
SND1-IT1Q9HBX3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SND1-IT1Q9HBX3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SND1-IT1Q9HBX3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SND1-IT1Q9HBX3 AL161658.1-201ENST00000623641 1967 ntBASIC18.15■□□□□ 0.5
SND1-IT1Q9HBX3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SND1-IT1Q9HBX3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SND1-IT1Q9HBX3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC18.13■□□□□ 0.49
SND1-IT1Q9HBX3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SND1-IT1Q9HBX3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SND1-IT1Q9HBX3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC18.12■□□□□ 0.49
SND1-IT1Q9HBX3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SND1-IT1Q9HBX3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
SND1-IT1Q9HBX3 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SND1-IT1Q9HBX3 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SND1-IT1Q9HBX3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SND1-IT1Q9HBX3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC18.1■□□□□ 0.49
SND1-IT1Q9HBX3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18.09■□□□□ 0.49
SND1-IT1Q9HBX3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SND1-IT1Q9HBX3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SND1-IT1Q9HBX3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms