Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
NSUN3Q9H649 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
NSUN3Q9H649 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
NSUN3Q9H649 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
NSUN3Q9H649 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
NSUN3Q9H649 AL133380.1-201ENST00000506013 324 ntBASIC30.11■■■□□ 2.41
NSUN3Q9H649 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
NSUN3Q9H649 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
NSUN3Q9H649 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
NSUN3Q9H649 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
NSUN3Q9H649 MIR7108-201ENST00000614319 87 ntBASIC30.08■■■□□ 2.41
NSUN3Q9H649 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
NSUN3Q9H649 ABHD17AP4-201ENST00000411545 909 ntBASIC30.06■■■□□ 2.4
NSUN3Q9H649 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.06■■■□□ 2.4
NSUN3Q9H649 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
NSUN3Q9H649 MIR3665-201ENST00000578708 105 ntBASIC30.05■■■□□ 2.4
NSUN3Q9H649 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.04■■■□□ 2.4
NSUN3Q9H649 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.04■■■□□ 2.4
NSUN3Q9H649 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
NSUN3Q9H649 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30■■■□□ 2.39
NSUN3Q9H649 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30■■■□□ 2.39
NSUN3Q9H649 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30■■■□□ 2.39
NSUN3Q9H649 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
NSUN3Q9H649 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.99■■■□□ 2.39
NSUN3Q9H649 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
NSUN3Q9H649 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
NSUN3Q9H649 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.95■■■□□ 2.39
NSUN3Q9H649 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
NSUN3Q9H649 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.92■■■□□ 2.38
NSUN3Q9H649 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.91■■■□□ 2.38
NSUN3Q9H649 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
NSUN3Q9H649 AC087741.3-201ENST00000624270 1347 ntBASIC29.9■■■□□ 2.38
NSUN3Q9H649 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
NSUN3Q9H649 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
NSUN3Q9H649 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.86■■■□□ 2.37
NSUN3Q9H649 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
NSUN3Q9H649 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.86■■■□□ 2.37
NSUN3Q9H649 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
NSUN3Q9H649 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
NSUN3Q9H649 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.83■■■□□ 2.37
NSUN3Q9H649 DUX4L28-201ENST00000623687 678 ntBASIC29.83■■■□□ 2.37
NSUN3Q9H649 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.81■■■□□ 2.36
NSUN3Q9H649 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.81■■■□□ 2.36
NSUN3Q9H649 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
NSUN3Q9H649 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.81■■■□□ 2.36
NSUN3Q9H649 AC044849.2-201ENST00000606596 710 ntBASIC29.81■■■□□ 2.36
NSUN3Q9H649 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
NSUN3Q9H649 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
NSUN3Q9H649 HLA-V-202ENST00000446817 847 ntBASIC29.8■■■□□ 2.36
NSUN3Q9H649 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
NSUN3Q9H649 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.79■■■□□ 2.36
NSUN3Q9H649 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.79■■■□□ 2.36
NSUN3Q9H649 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
NSUN3Q9H649 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.74■■■□□ 2.35
NSUN3Q9H649 MIR762-201ENST00000390236 83 ntBASIC29.73■■■□□ 2.35
NSUN3Q9H649 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
NSUN3Q9H649 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
NSUN3Q9H649 AC005559.1-201ENST00000589661 871 ntBASIC29.7■■■□□ 2.35
NSUN3Q9H649 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.69■■■□□ 2.34
NSUN3Q9H649 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.69■■■□□ 2.34
NSUN3Q9H649 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
NSUN3Q9H649 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.68■■■□□ 2.34
NSUN3Q9H649 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
NSUN3Q9H649 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.67■■■□□ 2.34
NSUN3Q9H649 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
NSUN3Q9H649 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
NSUN3Q9H649 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.65■■■□□ 2.34
NSUN3Q9H649 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.61■■■□□ 2.33
NSUN3Q9H649 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
NSUN3Q9H649 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.58■■■□□ 2.33
NSUN3Q9H649 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.58■■■□□ 2.33
NSUN3Q9H649 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.58■■■□□ 2.33
NSUN3Q9H649 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.57■■■□□ 2.32
NSUN3Q9H649 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.55■■■□□ 2.32
NSUN3Q9H649 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.55■■■□□ 2.32
NSUN3Q9H649 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
NSUN3Q9H649 ZNRF2P2-203ENST00000454624 420 ntBASIC29.54■■■□□ 2.32
NSUN3Q9H649 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.52■■■□□ 2.32
NSUN3Q9H649 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
NSUN3Q9H649 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.52■■■□□ 2.32
NSUN3Q9H649 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
NSUN3Q9H649 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
NSUN3Q9H649 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.5■■■□□ 2.31
NSUN3Q9H649 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.49■■■□□ 2.31
NSUN3Q9H649 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
NSUN3Q9H649 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
NSUN3Q9H649 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.45■■■□□ 2.31
NSUN3Q9H649 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
NSUN3Q9H649 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.3
NSUN3Q9H649 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.43■■■□□ 2.3
NSUN3Q9H649 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
NSUN3Q9H649 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.42■■■□□ 2.3
NSUN3Q9H649 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
NSUN3Q9H649 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
NSUN3Q9H649 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
NSUN3Q9H649 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.4■■■□□ 2.3
NSUN3Q9H649 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
NSUN3Q9H649 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.38■■■□□ 2.29
NSUN3Q9H649 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
NSUN3Q9H649 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.37■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms